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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0242100 |
| Transcript ID | LotjaGi1g1v0242100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2; TAIR: AT1G35780.1 N-lysine methyltransferase; Swiss-Prot: sp|Q9SIE0|ALKB2_ARATH DNA oxidative demethylase ALKBH2; TrEMBL-Plants: tr|C6TI18|C6TI18_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0242100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:58024120..58028259) extracted from Lotus japonicus Gifu genome v1.2.
TGTATCCTTGGTTGGGTTGGCGTTTGCTTTATTTTAAAACAGAAGAAAGAAAGAGTAGCTTCTACTTGAACACTCTTTCA CTCATCTCTACACTCCACTCAACTCTTCCCTTATTATACCATATAAATAAATCAAATCCCACTCTCTCTTCTCTTCTCTC CTCTGCATTCAACCAACAAACACACCTAGAAAATCAAATCATTTTTCTCATCTCTAACGACAACAACAACAACAACAACC TCGCTCATCCAGAATCAGGCACGGTCCCTCTCCATGTTTTTTTTCTCTCTGCAATTTTTGTTGCTTTTTGTTCATCAATG TTGATTGATTTCACAGGGAATTGCTATTACCAGCTTCGGGAAAATGGAGAGGAGCACTCCGGTGAGGAAACCTCACACTT CAACCGCAGATCTGCTCACTTGGTCCGAAACTCCACCGTCTGATTCACCAGCTCCTGCTTCCTCTGCACCTCGTTCTCAC CAGGTATGTGAATCGTCCACAGTATACACCCCTTTTGGTTTTTAATCGTTTTTCTTTGTGGGGTTGGTGGGAAATTGAAA AAAATTTGATTTTTTTTCTGGGTTTTGATTTTTTTGAATTGGGGATATTCGGTGGAATTTCAGCCGTCGGATGGGATCAG GAAGGTGGTGTTTGGTGGTCAGGTCACCGATGAAGAGGTTGAGAGCTTAAACAAACGGTGAGATCTACTATTCCAACTCT CTCTCCTCATTTTCTGATGATTCAAATTTCAAATTATTGTCATTATTATTAAAATGTTGGAACCGTTTCGCTTTCTTTTC TGTTTTTAAATTATTAAAGGAGCTGATTTTTTTATTTTTAATCTTAAATATATCTCACAAATTGTTCCTTTCTCCTCTAG TTTCAATAGTGGTTTGTGTCATTGATCTGTAATCAATTTCTATTTTTGGCCATAGTCTTCCACTAACAATAACAATTTGA GTTTTTTTAGTGTATCTTGCTTCTCTTATCCACCGCTTGCAATGAAGCCAATGAATGATAACAGCCAAATGGGATTGCTT GGGTTGTTGAGCTTGGTTGAAATGGATCTATCATCTAGTAGCTTGATTGTTTTCATCTTTTTACAATAAAAAATTGAGTT TTTAATTTTTTGATGCATGTGTTTGAACTTTTGAAAAGAAAAATCAAATTTTGATTATTTTCAGAAGCTATTTTGAGTAG CCTATTTTGAGTAGCTTCTAGAAAATTCTAAATATGTCATGGTAATTTTATAATTTTCTTTTAAAATAAAAGTTACTTCT ATAAATAATCTGTTTTATTTCACAGGCTTAAAATCACTGTTTTTTAAGATTACCCAAAACAGGCCCTGAACCATGCCTCC TTGATAAACCTGGCTGGTTCTTCATTTTGGTAAAGGAAGTGCTGAAATGAGATACTTAACTTCAGCTCAGTCATGTTATA TGTCATTTTTAATTTTAGGGCAGGGGAATCACATTTAGAATATTAGGGTGTAGTGCTATGAAATTCAATTCATGGTACCT TCATGGTCATCAATCTCTAAAATCCCACAATTTCAGTACCTATTTGTACATGTGTATTATAATCACACCTTTAGCTATCA GTATTATCACCTATTGTTTTCCTTTTTGAAAATGGTGCATATCAAATGCCCTGCGATGCCAGTCCCAACTATCTGTTGTC TCATAATGAAGAAACACCATCTATTCATGCATTTCTTATCGCTTTCCCCCCATAAAATTGTTGCAGATTGAAACTAATAA TGTAAAATAGAGGAGGTTGGTTTTCTCCCCCCCCCCTCCCTCTCTCCCCCTCCCTCTCTTTTTAACCCAGTGTTTTTTAG TTCCATGTGATATGCTGCCTGCTTAAATGCTAACTTGAATCTCAACTGCTTTGCCTTTATTTATTGACATTGTGATTTTT TACTAGTGTAAAATGAATTCAAATTCAAATTTTGAATCAAATTATTAACTCACTTGCTCTTTTTCCCACTCATGATTGTG AACCCAAAGTCAACTTGGCTGTCTCTTTATATTTATGTCATCTGATATCGTCTAGCTGTGGAATTTTCAGGAAGCCTTGT TCGGAGTCTAAGATGAAGGAGATCACTGGTAGTGGAATATTTGTGGCCAATGGGGAGGATGACACTGCAGAAGATGGCAG TGCCAACCCTCAAAATAAAACCGGAATACGCATGTATCAGGTATTGTTTTTCACAATATGAAAATAGATACTTTTACTTA TTTTATTGATCGTAGTTTTGCAGTGGATTTCTTTTAACTTTCACATTTATGGTTAATTGTTCAAAATCTCAGCAAGCTGT TGCGGGAATCAGTCATATCTCCTTTGGTGAGGAAGGGAGCCTTTTGCCAAAAAAACCCTCTTCTTTGCCTGAGGTTGCCA AGCAGCGTGAGCTGAGTGGAACTCTGGAAAGTGAAGACCACAAATTGAACAAGCAGCTTTCGGATGCTAAGTGCAAGGAA CTTAGTGGTCATGACATATTTGCTCCACCACCAGAAATCAAACCCCGACCAATAACTGCTCGCGTACTGGAGTTGAAAGG GAGCATAGATATTGGAGAGCTTGCTCCAAGTCAGGTCTGCACCTCTATATGTTGCTAACCTGAATTATTTTGGATGATTG CTTTCAAATTTTTATCTCTCTCCCTCAACTTGGGTCATCCTTCAATAGCCTGTCTTCAAATATGCTACTTGGTTTATGCC AAAAACTAAGTTAATTGCAGCATATGGGATGAGTAATCCAAAACTCATCTTGATTTGTGAGTCTTGGTATTAACATTTTG AATATTAAGGTTGTGCACTGCAGGGGAACTACTTCCTCATGCATATTTCATAGGGAGTGTTTGGAAAATCTTACATTTTA CATTTTGCAGTACAAACTCAGTTAAAAAACACATTTATCAAGAAAAAAATGTGAAAGAACATGTTTTGTTAGTAATTTGG ATCCCTGCCGTCAGGGAAATCCTACATTCAGAGGAGTCAAGGAATTTGTGTCGTTCGATCAAGATCATTTGATTCATATA TTTCTGTTAGAATATAATATAAAACCATTAATGTGACCCTTACCCAACAGCTTAAGCTTTTGGGATTAAGTGGTTGTCTG ACATGGTATCAGAGCCTCTGTGACCGAGAGGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTCTAATTAAAAGTGGAATT TAATTAAGCACATGGTAGGTGGGCCTGTGCAATTATCCACGCTTCAAGCCCAAAGGGCTCTTGCGTGAGGGGGCGTGTTA GAATATAATATAAAACCATTAATGTGACCCTTACCCAACAGCTTAAGCTTTTGGGATTAAGTGGTTGTCTGACAATTTCC TCAAGATCAGAGGACAGATATAAAGTTAGAATTTGATCAGTCTAATCTTGATTGAACTGTGCTCAGATTCCCTGACTGTG AATTTAGGAATTCCTTGATTGCAGGGAATCCAAATTCGTTTTGCTCGTTGGCACCTTTAATCTTCGTGCATTTTGAATAA TACTTGCTTGGGTTGTGTGACCATGTTTAATAGGCCGATGGGGATGGTACTACCAAGACAGCAAAGAAGATTTACAAAGA GAAATTTGCAGACCTTTCAGGAAATGACATTTTCAGGGGTGAAGTGCCACCTTCCTCCACTGAGAAATCGCTGAGTGGTG CTAAACTGCGCGAGATAAGTGGCAGTAACATCTTTGCTGATGGAAAGGTGGAATCTAGAGACTTCCTGGGCGGTGTACGG AAACCACCTGGTGGAGAGAGCAGCATTGCCTTGGTATAATTTGTTAGGTCTAACTTATCTTCTTCATATGATGGTCTTGT TTTGGTTTAATCAATTTTAGTGGGGATGTGTTATTATATTATTTGACCTTGTATTCTGGGTTTTGGGATTTTGCGATTTA GATTTCTTGATGACTTGACCAAAAGGAACATTGCTAATTGGTTGTATGTCCATAATCCTGTGTTTTGCTTCGTGTTTGCT TTAATGAAGTGATTTGGACTGTTTACCATCTAATATAGACTCACTTTATTCTTATATATCTGTCACTTTATGATTTTGAT ACATGTATTAAGTATAAGTAACATTTGTTTTTTTTTTTAATGTTAAAAATTACTTCTAGC
CDS sequence (LotjaGi1g1v0242100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGGAGCACTCCGGTGAGGAAACCTCACACTTCAACCGCAGATCTGCTCACTTGGTCCGAAACTCCACCGTCTGA TTCACCAGCTCCTGCTTCCTCTGCACCTCGTTCTCACCAGCCGTCGGATGGGATCAGGAAGGTGGTGTTTGGTGGTCAGG TCACCGATGAAGAGGTTGAGAGCTTAAACAAACGGAAGCCTTGTTCGGAGTCTAAGATGAAGGAGATCACTGGTAGTGGA ATATTTGTGGCCAATGGGGAGGATGACACTGCAGAAGATGGCAGTGCCAACCCTCAAAATAAAACCGGAATACGCATGTA TCAGCAAGCTGTTGCGGGAATCAGTCATATCTCCTTTGGTGAGGAAGGGAGCCTTTTGCCAAAAAAACCCTCTTCTTTGC CTGAGGTTGCCAAGCAGCGTGAGCTGAGTGGAACTCTGGAAAGTGAAGACCACAAATTGAACAAGCAGCTTTCGGATGCT AAGTGCAAGGAACTTAGTGGTCATGACATATTTGCTCCACCACCAGAAATCAAACCCCGACCAATAACTGCTCGCGTACT GGAGTTGAAAGGGAGCATAGATATTGGAGAGCTTGCTCCAAGTCAGGCCGATGGGGATGGTACTACCAAGACAGCAAAGA AGATTTACAAAGAGAAATTTGCAGACCTTTCAGGAAATGACATTTTCAGGGGTGAAGTGCCACCTTCCTCCACTGAGAAA TCGCTGAGTGGTGCTAAACTGCGCGAGATAAGTGGCAGTAACATCTTTGCTGATGGAAAGGTGGAATCTAGAGACTTCCT GGGCGGTGTACGGAAACCACCTGGTGGAGAGAGCAGCATTGCCTTGGTATAA
Protein sequence (LotjaGi1g1v0242100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERSTPVRKPHTSTADLLTWSETPPSDSPAPASSAPRSHQPSDGIRKVVFGGQVTDEEVESLNKRKPCSESKMKEITGSG IFVANGEDDTAEDGSANPQNKTGIRMYQQAVAGISHISFGEEGSLLPKKPSSLPEVAKQRELSGTLESEDHKLNKQLSDA KCKELSGHDIFAPPPEIKPRPITARVLELKGSIDIGELAPSQADGDGTTKTAKKIYKEKFADLSGNDIFRGEVPPSSTEK SLSGAKLREISGSNIFADGKVESRDFLGGVRKPPGGESSIALV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 283 | 283 | 2.0E-157 | – | |
| PANTHER | 1 | 283 | 283 | 2.0E-157 | – | |
| MobiDBLite | 1 | 52 | 52 | - | – | |
| Pfam | 3 | 281 | 279 | 4.0E-138 | ||
| MobiDBLite | 10 | 40 | 31 | - | – | |
| MobiDBLite | 123 | 153 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0242100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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