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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR025131
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.917s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0012229.1
n.a. Hematological and neurological expressed 1-like protein [Theobroma cacao] gi|508700231|gb|EOX92127.1| chr0 4614692 4617680 -
2 domain predictions
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Lj0g3v0066399.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508724124|gb|EOY16021.1| chr0 23373191 23376894 -
2 domain predictions
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Lj0g3v0361759.1
n.a. Hematological and neurological expressed 1-like protein [Theobroma cacao] gi|508700231|gb|EOX92127.1| chr0 190590970 190594046 +
2 domain predictions
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Lj4g3v2823360.1
n.a. Hematological and neurological expressed 1-like protein [Theobroma cacao] gi|508700231|gb|EOX92127.1| chr4 37774635 37777560 +
2 domain predictions
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Lj4g3v2823360.2
n.a. Hematological and neurological expressed 1-like protein [Theobroma cacao] gi|508700231|gb|EOX92127.1| chr4 37774635 37777560 +
2 domain predictions
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LotjaGi1g1v0242100.1
n.a. Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2; TAIR: AT1G35780.1 N-lysine methyltransferase; Swiss-Prot: sp|Q9SIE0|ALKB2_ARATH DNA oxidative demethylase ALKBH2; TrEMBL-Plants: tr|C6TI18|C6TI18_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0242100 LjG1.1_chr1 58024019 58028423 +
2 domain predictions
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LotjaGi1g1v0242100.2
n.a. Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2; TAIR: AT1G35780.1 N-lysine methyltransferase; Swiss-Prot: sp|Q9SIE0|ALKB2_ARATH DNA oxidative demethylase ALKBH2; TrEMBL-Plants: tr|C6TI18|C6TI18_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0242100 LjG1.1_chr1 58024120 58028259 +
2 domain predictions
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LotjaGi4g1v0397800.1
n.a. Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2; TAIR: AT4G39860.1 hematological/neurological-like protein; Swiss-Prot: sp|Q9SIE0|ALKB2_ARATH DNA oxidative demethylase ALKBH2; TrEMBL-Plants: tr|A0A0S3S0Z1|A0A0S3S0Z1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0397800 LjG1.1_chr4 77544947 77548279 -
2 domain predictions
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LotjaGi6g1v0087900.1
n.a. Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2; TAIR: AT4G39860.1 hematological/neurological-like protein; Swiss-Prot: sp|Q9SIE0|ALKB2_ARATH DNA oxidative demethylase ALKBH2; TrEMBL-Plants: tr|I1MYS4|I1MYS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0087900 LjG1.1_chr6 17783051 17786450 +
2 domain predictions
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LotjaGi6g1v0087900.2
n.a. Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2; TAIR: AT4G39860.1 hematological/neurological-like protein; Swiss-Prot: sp|Q9MA44|SIPL5_ARATH Signal peptide peptidase-like 5; TrEMBL-Plants: tr|A0A151U916|A0A151U916_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0087900 LjG1.1_chr6 17783180 17785704 +
2 domain predictions
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