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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0244400 |
| Transcript ID | LotjaGi1g1v0244400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2C-like; TAIR: AT1G34750.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9S9Z7|P2C10_ARATH Probable protein phosphatase 2C 10; TrEMBL-Plants: tr|I1K9Y2|I1K9Y2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:58524932..58528628) extracted from Lotus japonicus Gifu genome v1.2.
AGAAATTGCTATGCAATTGGGACACCGGGACACCTTTTCCCTTCGTATCACAGAAACATATATAGTTTTTAATTCTTTGT TTGCGAAGCTTTAAGGTTTCCGAAACGGTTGCATAATAATATCATAACAGAGAAACATAAGCATCCTACGATTCCTTTCT GTCTCACACTATCTTATAATTATCGAAACATAAGCATCCTACCAAGTTGAATCTTCTTTTCTGAAATTTTATTGAATTAG TGAGCTGAATTTCATTTATGTATCAGTTTTACCTTGTGTCACTTCACTATTGCTTGGTTTAATGGCTTTTTGGGGTTTTC TGTTGATTTTCAAAATTCTGTTTTTGACAATTGTTTTTCTGTTTTTGATCACAGAGTCTGTGATTCTGGACAAGGTCTGT GATTTCAGCAAGTGGGTTTCTTTCCCAATTGGTTGAAAACATTGAATAAGCAGCTGGAACTTTTCTTTTTCTTCATGGAT AAGCTATGCTGTTTTAAGTCTTCATACTCTCAGGTAAGAATGTCACTTCTTTTCTTGTTGATTCTTTTACATGAAACATT ATTCACTGTCTTTTGAGTTTGATGGAATTATGAGTCTATTATATTCTCAATTCGTATTAATCACTCATTTTGGGGTAAAA CTCAAATTCTGTTTTTGGGATTTATATTCCTATAAAATACTAAATTTGAGTGGTATGAAATCAAGAACATTGCCTTATAA TTTATTATGTAGGGAACATGGTTCATTCTTCCCGTGCCTTGACTGTGCCCGGTCGACATTGGTTAGCACTTAGCAATTTA TTACAGAATACTTGTTTTGTCTGGATCCTATTGTAGAATTGCTAGAATAAAATTAACCTAAGCCACAAAGTTTGTATCTT GCTAGCCTATAATTTGAGGTTTAGATACATGATACATCAGATAAAAGTAAAACGTTCTTTTTTTTTTTTTGGCATCCGTG ATCATCTATTAGGTTGCTCCAAGAACTCTGTTAGGATCTATTTGCTTGATAGGGGATTGTCAAATGTCAATGAAATAACT GTGGCCTTTTCTGCGTAATCAAATCATTCTCGCTTCTTTACATGTCCCCTGAAGTGGCACTATGGCAGGTTTATTCTATT TGTCTATTTTACAGCTTGTAGCGTCGCGTTCTTCATCCAGCACTGGTAAGGGAAAAAATCATGATGGCTCAATAAAGTAT GGTTTCAGCCTAGTAAAAGGGAGAGCTAACCATCCAATGGAGGATTATCATGTTGCTAAGTTTGTGCAGACACGAGATAA AGAATTGGGTTTATTCGCTATTTATGATGGTCACTTGGGAGACCGAGTGCCTGCCTACTTGCAGAAACATTTGTTTTCCA ACATTCTAAAGGAGGTGTGTCATTACTCTCAGAGAGTTGTAAAAACTAATTATTTCTTCTATGATATTTTTGGACCAATG GTGCAACACAAAAAGTTGCTGCCATGTGACTGACGTCACGGGTTCAAGTCCTAGAAACAACCTCTCTTGTGTAAAATATA AATGTAAGGCTGCATACATTAGACCATGTGGTCAGACCCTTCCTCATACCTGCGCATAGCGGGATCTTAAATGCAACTGG CTTCCTTTTGATATTGTTGTACCAAAATTCAGATTGGAAACATTACATTCTTGTACTTCTTCATTTAATATACCAGGAGG AATTTTGGAATGACCCCACTCTTTCTATCTCAAAAGCATATGAAAACACAGATCAGGCTATTCTGTCACAGAGTTCTGAT TTGGGGCGAGGTGGATCAACAGCTGTAACTGCAATATTGATCAATGGGCAAAGGTTGTGGATAGCAAATGTTGGAGACTC GAGAGCTGTTCTTTCAAGAAAAGGTCAAGCAGTACAAATGAGTACAGATCATGAGCCCAACACGGAACGAGGCAGCATTG AGACTAAAGGAGGTTTTGTCTCCAACTTGCCAGGTACTTGAAGCTTCTGCCATTCCAATTTTATGGAGTCTCATGTTCTG GTTTCTTGTTTGGATGTATAGGAGTAATTCCTGAAGTCTATGAATGAAAAAACAGTTGTTTACAGATTTCTCAGCAATCC ATAAAATTAAGGTCCAGTAGGAAAAATCCTTTTCTTCATTTTACCGAAACCCTGTGTTAGAAGTATTATATAAAAATCAT TTGTGTCTTAACCCAACAATTTAAGCTTTTGGATTAGTTGGTTCATAATATGGTATCAGAGCCTCTATGACCAAGTGGTC TAGAGTTTGATTTGTTTTTCCCCTAATTATTCTATTTCCTTTTACATGAGAGACCGTGTTAGAAGTATAACATGAAACCA TTCATGTGTCTTACCCCAACAGCTTAAGATTTTGGGATAGTTGCCTCATCAAACCCAGTTCCCAAAAATTAATCGAGCTT GGCTATATTCATATGCTAATATCAAAGAGTTGCAACTGCAAAATTTCCTTTACTGCAAGGAGTTATCGCATTTGCGTACC TAATTATGAAATAACAGACACTTCTTGTACAGTAATATAGTGGTTTATTTGCATCCTTGAGATATAAGTGAGCTTATTTT TATCACAGCACAAAGTTGGCATTGTGTGGATGCTTACAGTAATATTAATGATGTTAATGCAAGGTGATGTGCCTAGAGTA AATGGACAACTAGCTGTTTCTCGTGCATTCGGAGACAAGAGTCTCAAGTCACATTTGCGATCAGACCCCGATGTACAGAA TACCAATGTAGATGCTGATACTGATATTCTAATCCTTGCAAGTGATGGAGTTTGGAAGGTGAAATAGAAGTGTTATTTTG TTGGCATGACTCTTGTTTTTAAAGGTTAATATAAAAACTAGAAAAAACATTCCCTTTGCTTTTAAAACCAGGTAATGGCT AATCAAGAGGCAGTGGATATTGCTAAAAGAATGAGAGACCCACAGAAAGCAGCTAAGCAACTAACAGCTGAAGCATTAAA AAGGGACAGTAAAGATGATATATCTTGCGTTGTGGTTAAGTTCAGGTGGTGATACCATTTTAAACCCTGTGTGCTGAACG GGGGTGCAGTTCTTACCAATAATATGGTAAATATCTCTACATAGCATGCCAAGACCAAATAACATACATATCACATACTA GTTTCTTCTGAATAGGTAATTTGCCTAAGAAAAAAGAGAAAGAAGGGTTTGTAAAGCTGTAAAATTGCTTCCTTGATTAG ATTTTTGTCATTTGAGAATGTTTGATTTCTTTCTGTCAAGTGTGGCTACTCATAATCTTTTGTATATTGTCTTTATATTC ATCATAAGATACAAGGTGGCTGTGTTTAAGAGGAATATGCTTCTACTTATTTATTCGAATATAGCTAGTGTACATAGGAA GGACATTGGTCCTATCCACACATTATTTGATAGACACGGACCCCTTTTCTTCATTCCACTTTCCAAATGGGAGGAGCTCA AGTTGGCCCTTTCTGAGGTTTATCCATGATCTAGTCACACAAACTTGTAGTACAATTGCATTTACCATAGTTTTGTAGTG CAATTGCATTTACCATAGTTATTAAACCGGTCCAATCGGTAGAACCAGGAACTGGTCAAGTAACTAGTCCATTGGAATGA AAAAACTAGTTGATATCAGAACTAAAGAGAACTATAAATGAAACGGGTCAAAACTAGGGATGGCAGAGAAGCCCGAACCC ATGGGCACCCGACCCGA
CDS sequence (LotjaGi1g1v0244400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAAGCTATGCTGTTTTAAGTCTTCATACTCTCAGCTTGTAGCGTCGCGTTCTTCATCCAGCACTGGTAAGGGAAA AAATCATGATGGCTCAATAAAGTATGGTTTCAGCCTAGTAAAAGGGAGAGCTAACCATCCAATGGAGGATTATCATGTTG CTAAGTTTGTGCAGACACGAGATAAAGAATTGGGTTTATTCGCTATTTATGATGGTCACTTGGGAGACCGAGTGCCTGCC TACTTGCAGAAACATTTGTTTTCCAACATTCTAAAGGAGGAGGAATTTTGGAATGACCCCACTCTTTCTATCTCAAAAGC ATATGAAAACACAGATCAGGCTATTCTGTCACAGAGTTCTGATTTGGGGCGAGGTGGATCAACAGCTGTAACTGCAATAT TGATCAATGGGCAAAGGTTGTGGATAGCAAATGTTGGAGACTCGAGAGCTGTTCTTTCAAGAAAAGGTCAAGCAGTACAA ATGAGTACAGATCATGAGCCCAACACGGAACGAGGCAGCATTGAGACTAAAGGAGGTTTTGTCTCCAACTTGCCAGGTGA TGTGCCTAGAGTAAATGGACAACTAGCTGTTTCTCGTGCATTCGGAGACAAGAGTCTCAAGTCACATTTGCGATCAGACC CCGATGTACAGAATACCAATGTAGATGCTGATACTGATATTCTAATCCTTGCAAGTGATGGAGTTTGGAAGGTAATGGCT AATCAAGAGGCAGTGGATATTGCTAAAAGAATGAGAGACCCACAGAAAGCAGCTAAGCAACTAACAGCTGAAGCATTAAA AAGGGACAGTAAAGATGATATATCTTGCGTTGTGGTTAAGTTCAGGTGGTGA
Protein sequence (LotjaGi1g1v0244400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKLCCFKSSYSQLVASRSSSSTGKGKNHDGSIKYGFSLVKGRANHPMEDYHVAKFVQTRDKELGLFAIYDGHLGDRVPA YLQKHLFSNILKEEEFWNDPTLSISKAYENTDQAILSQSSDLGRGGSTAVTAILINGQRLWIANVGDSRAVLSRKGQAVQ MSTDHEPNTERGSIETKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQNTNVDADTDILILASDGVWKVMA NQEAVDIAKRMRDPQKAAKQLTAEALKRDSKDDISCVVVKFRW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 281 | 270 | 1.7E-161 | – | |
| PANTHER | 12 | 281 | 270 | 1.7E-161 | ||
| SMART | 26 | 279 | 254 | 3.1E-81 | ||
| Gene3D | 31 | 283 | 253 | 4.5E-76 | ||
| SUPERFAMILY | 32 | 282 | 251 | 4.58E-68 | ||
| CDD | 33 | 281 | 249 | 1.77937E-87 | ||
| ProSiteProfiles | 34 | 281 | 248 | 49.449 | ||
| Pfam | 43 | 274 | 232 | 1.5E-56 | ||
| SMART | 45 | 281 | 237 | 2.8E-4 | ||
| MobiDBLite | 156 | 183 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi1g1v0244400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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