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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0248500 |
| Transcript ID | LotjaGi1g1v0248500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT1G77930.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|Q3MG81|DNAJ_ANAVT Chaperone protein DnaJ; TrEMBL-Plants: tr|I3T1P4|I3T1P4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0248500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:59657662..59662335) extracted from Lotus japonicus Gifu genome v1.2.
GGTTTATATTAGTTATTTTGGGAGATAGACATGGGCATAAAAGTACCAACAAGTAACTGTAATGAAACAGGAAAAGAAGC CAAACCACATATTTCCCACCAAAAAAGAAAAAGAAAAAAAAAAGGAAAAGAAAATCAGAATTTCCTCTCCAACAAAAATT GACAAAATTGGAAGATTCTGTCAGATTCATGTGTGTTGGTTATATCCACCACCTCTTCTGTGACGAAAAACAAGGATTTT TACACCTGGGTCGTCGTTGATTCTTCTTCAACCGTTTCATTGAATCGGTTTCGGTCGTTGAATCAGGGAAAAACTATGAG CAATTTGAGAACCCTATGCAGGAGTCACACGGTGTTCTCCTTCATCAGTTGCAGGCACCAATTTCGATCCAGGGCTTTGT TTCGGAACCCTAATTGGAAGCCGAGTTTGCAATCTCCGTCACTGTATTCTACTTGCCTTGGTTCGAGCAGGACCGTGCCC TGGTTTCGCGTGAATCAGAGAAGAACTGTGACCAAGGCATCAAAATGGGATGAAGAGAAATCCCCATATGAAACTCTTGG TAATTTTTGCTTTCAAGTTTGTTCTTTTTCCCTGACAATCCTAGTTATTGAGAAAATTGAAAGAAAAAAAATTTATTTTC CTGTTGAAATAAGAAATTTTGCTGCTCAAAAGATTAAAGACTAACTAGTTTACTGATGGGTCCCCCGAGGGTTAGCTCAA GTGGTAAGAGCTAGGAGACATAAGGGTTGAGTGGGATGAAGGATGAAGGGTCAGGGTTCGAACTCTACTATGAGGACGGA CTAATTTACTAACATTATTAAGGACGGACTAATTTACTAACATTATTAACCATTGACATTTGCCTATAAAAAAAATTATT TTAGTGATGGGTAACTGGGAAATTTCCTTGGAAAGAGAAGAAATGAATGTATTTGGATTTGTCAATGTCAAGCATGCTGG TGTAGTTTTAGTCTATGTTGTAGGAAGAGAATAGAGATGGGAAATTCCTGTGGATTTTTGTTTTGACAGTTCTTCCTTCT ATTTTCTTTGTTGACATAACAGAATTGGAAAGAGATGCTGATGAGGAGCAGATAAAGATTGCTTATAGACGTTTGGCCAA ATTTTATCATCCAGATGGTATGTATCTTAATGTTAGATATTTGTTTTCGTTCGATGTCATATGAACGGTATCAGTCAGCT TGATATTGGGTAATGCTGATTGTGGTGGTCTAACGTTATATACTTATATTATCATACAAGAATCATACAACATACAAGAA TCAAAATGAAGCTAAGCAACTACTGTGCTGTTAGCATTTTGTTTTTAGATCTTGTTTTAAATGCTAGTTTACGAGAATGT GTGAGTTGTTCTATTTATTCCATATGTATGATCCTATGAAGCAGTTGGGGCTTGTGAGAAATATCCTTAGTGTTTGTCTG TTTGGCGCGCAACTTAGTTGTGATATGGTTCTTCTGTGCTGTGTTGTTTCTTGAAGATGAATATGACCTCTTAATGTATA GTAACTTTTCACTTTATTCTTTTAGTCTACGATGGTAGAGGAACCCTTGAAGAAGGTGAAACAGCAGAAGCTAGGTTCAT CAAGATTCAAGCTGCTTATGAATTGCTTATAGATGAGGAGACGCGAAGAAAGTATGACATGGATAACCGGGTCAACCCTA TGAAGGTTAGATTTTCTTGTCTCTCATTGTCAGTGGTTGACTTGGTACTTGTTCGCTATCATTTATAAAGGAACTTCAGC TTTCTAATTTACCCTTCTGTCTTTCGCTGTCCATGAGTTTGGAACTTGTTATATGGGATTTTGTGTGGATCATAATATGC TGTGTGTTTAGTAGTATCAAGCCAGAATGACTTCTTTGCAGCTATAATATTTTTGCATCTCAGCATCCCTTTCGATTTCT TTTTCTATTTCTCAAGCTGGTCAGTAAAACTAATATCAAGTATTGAACTCCTCAGCTACCTAAATGTTGAACCAATCAAA CCACCTCATTTTTTAATGCTGTAGGAAGGCAACAGATATTACAATTTTCTATCCTTTTGTATGAGCATAGCAGACTGAGA TGAACTTCAACAAATAACTATTGTTTCATCTTTTGTAAAGAGAACACTCTGAAATGGTTTGCTATCCACTTTTTAATCAG TGATGCAGCCTGAAACGGACCTCTAAGCATTAATTTGTAAACTTTTAAAATAGGTGTTAGGGTTGAATGCACAAGTTTTC TTCTTACTCTTGATTGATGTGGTGTTTTGTTTCCTTCAGGCATCTCAAGCATGGATGGAGTGGCTTATAAAAAAGCGAAA AGCTTTTGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAGCAGCAACAGCGCGAGCTGAATATTCGCGTCCGAC AACTTTCTCGTTCAAAGGTATTGGGGTATGCTTGAATAAATGTTGCCAGCTTACTATAGGCTTGAATGATTCTATCAAAG ATGTCAAATTTTCTTCTAACCACGATCTACCTGGTTTTCTTTCTTACAAATGAAGTGAGAGACTGAGAGTAAGTTGTTTT CATCACTTCTTGATTACATGTTTAAGTGAATTTTGAAGCAATCCTTGCTTCACACATAACATCACAGATAGCTGTTTTTC ACCCAATAATGGGTATTGGGAAGTGTCATTATCACACATTTCATCTTTTCTTAGAGCTATTCCATTTTTTCTTTCCCTTG CATCTGAGTGGAGGTATTTTGTGAAATATTCTCAGATTGATCCCGACGAAGCAAGGAGGATCCTGGCAAGAGAAAAGAAG GCTTCTGCTGAAAATTTCAGCAATACCCTTAAAAGGCACACACTTATACTTAAGAAAAGAGATTTGATGCGAAGAAAAGC TGAGGAAGAAAAGAAAATGACTATCAGCCAGCTCTTGGCAGCAGAAGGTCTTGAGCTAGATTCAGATAGTGATGAGGCGC TGTAGTGAACTTACCAATAGCTAATACTTGATTCAACACCATCATGTCTCTTTCCATGAATCTAATTATTTTTTAATTAT AATTATATAGAAGTTATGTGTACATATATTTTGTTACTTCAGGACTAAATACCAAAATCAAAATGGTTTTAGATCATAAG TTTTACAAATTTGGGTGTAATTAAAATTGTAAATTCAATTCTACTTCTATTATCTACTTCATTATAAATTGGAGACCTAC AGTGGCTTCTACTCTCCCTTTCAATAAGCCAAACCACTCTAAGTAAAACTTATTCTCTCAAAGCATTAGAGGTGAGAATC ACTCGTTATGCTTGTTATTCAATAATAAGAAATCAAATATTCTTCTTCTCTTCAATCTTTTTTTTTTTTTTTTTTTTGGC TTAATTCCACTTTGGGCCCTGATTGAGCGATCGGGGCCCCCGTGTTTAAACGTAGCGGTCAGGCACCCCAACGTTTCAAA AACGAGCGTTCCAAGCCCTTCTGTTAAGTGCCGTTAGTTTGACCAAACAGAGCAAAATACATATTTATTAATCACATTTA ATTTATGATAATTTTAATTAAGTTAATTAAAACCTAATTCCCCATAATCTCTCCTCTCTCTTCTTCATCTTCTACCTCCC AATTTTAGAAATCAAAACCTCTCCCTCCATATCTTCATCCGTGCATCTCCATCATCTTTGTCTCTGTAATTTTGCTTCTG AACAAATTAAAAATTGAGAAGCCAGAATCTAATTTTCCTCCTCCCCTTCGTCCCTATGATGGGATTTTCCCACCAACCCA CCGGCAACCACCACATAAGAACCCAGGTTTTGCATCCCTTTGGCCCTGATCTCCTCCTTTTCCTCTCTCCCCCACTTCAT CTCCACTCTCCCCCTATCACCACTGTCCACCATTTTGTCTCAGTCAGCTAAACCCAGAACAACTTGCAACCCACCTTCTC CTTCAACTCAGATCTGATGGTGGTGTTTGTTATTCACTCCATCTTGGAAGACATCGACCTGGTTGCATGTGGGTTTTTCC CATTTGCAAGCTCCTACCTTTCTCAAGCTTTTTTTTACAGCATCCTACCTTTCTCAAGCTACAAAAAAAAAAGTGAGAAG AAAAAAAAAAGGTAAAGGACAGTGGCCGCGAGATCGACTAAAAAGGTGAGAAGAGGGGTTAGGTTGTTGGTTCGTTTTTT TTTTCTCACTGTTTTTCAGATTGAGATTGGTGATTTGGGGGGATTAAAGGGTAGAGAATTAATTGTTTCTGGAAATTGAT GGGTTTTTCCTTACAGATTTCTGGCAAGTGTTGGAGAGAAATGGAGGAAAGAAGAAGCCGAAGAGCAGTGGTGGCGACCA TGAAGAAGAAGATGATGTTGTGTGGTTTTAGGGTTTTCAGAGAAAAATGGAGAAGAAAGTGAGAAAGGGAGAGATGTCGA GATTGAAAGAGAATTGGGGGGGGAGGATTTTTGGGTAAAAAAAAATAATATTAAAATAAAAAAGAAAATTCACGTCACTA GTTCCGTTGGTCAAACTAACGACACTTAACAGAAGGGTTTGGAACGCACGTTTTTGGAACGTTTGGGTGTCTAACCGCTA CGTTTAAACACGGGGGCCCCGATCGCTCATTTTTAAAAGATCAGGGGCCCAAAGTGGAATTAAGCCTTTTTTTTTTTTTT CTTCTCTTCAATCTACTAGTAGTAACAAATCCAC
CDS sequence (LotjaGi1g1v0248500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCAATTTGAGAACCCTATGCAGGAGTCACACGGTGTTCTCCTTCATCAGTTGCAGGCACCAATTTCGATCCAGGGC TTTGTTTCGGAACCCTAATTGGAAGCCGAGTTTGCAATCTCCGTCACTGTATTCTACTTGCCTTGGTTCGAGCAGGACCG TGCCCTGGTTTCGCGTGAATCAGAGAAGAACTGTGACCAAGGCATCAAAATGGGATGAAGAGAAATCCCCATATGAAACT CTTGAATTGGAAAGAGATGCTGATGAGGAGCAGATAAAGATTGCTTATAGACGTTTGGCCAAATTTTATCATCCAGATGT CTACGATGGTAGAGGAACCCTTGAAGAAGGTGAAACAGCAGAAGCTAGGTTCATCAAGATTCAAGCTGCTTATGAATTGC TTATAGATGAGGAGACGCGAAGAAAGTATGACATGGATAACCGGGTCAACCCTATGAAGGCATCTCAAGCATGGATGGAG TGGCTTATAAAAAAGCGAAAAGCTTTTGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAGCAGCAACAGCGCGA GCTGAATATTCGCGTCCGACAACTTTCTCGTTCAAAGATTGATCCCGACGAAGCAAGGAGGATCCTGGCAAGAGAAAAGA AGGCTTCTGCTGAAAATTTCAGCAATACCCTTAAAAGGCACACACTTATACTTAAGAAAAGAGATTTGATGCGAAGAAAA GCTGAGGAAGAAAAGAAAATGACTATCAGCCAGCTCTTGGCAGCAGAAGGTCTTGAGCTAGATTCAGATAGTGATGAGGC GCTGTAG
Protein sequence (LotjaGi1g1v0248500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNLRTLCRSHTVFSFISCRHQFRSRALFRNPNWKPSLQSPSLYSTCLGSSRTVPWFRVNQRRTVTKASKWDEEKSPYET LELERDADEEQIKIAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDEETRRKYDMDNRVNPMKASQAWME WLIKKRKAFDQRGDMAIAAWAEQQQRELNIRVRQLSRSKIDPDEARRILAREKKASAENFSNTLKRHTLILKKRDLMRRK AEEEKKMTISQLLAAEGLELDSDSDEAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 52 | 265 | 214 | 9.4E-46 | – | |
| PANTHER | 52 | 265 | 214 | 9.4E-46 | – | |
| Gene3D | 58 | 163 | 106 | 9.6E-22 | ||
| SUPERFAMILY | 70 | 145 | 76 | 2.36E-22 | ||
| SMART | 75 | 139 | 65 | 1.1E-16 | ||
| ProSiteProfiles | 76 | 147 | 72 | 17.238 | ||
| Pfam | 77 | 144 | 68 | 4.4E-19 | ||
| CDD | 77 | 136 | 60 | 6.38537E-16 | ||
| Coils | 78 | 98 | 21 | - | – | |
| PRINTS | 78 | 96 | 19 | 2.2E-15 | ||
| PRINTS | 96 | 111 | 16 | 2.2E-15 | ||
| PRINTS | 119 | 139 | 21 | 2.2E-15 | ||
| ProSitePatterns | 124 | 143 | 20 | - | ||
| PRINTS | 165 | 184 | 20 | 2.2E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0248500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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