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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0254300 |
| Transcript ID | LotjaGi1g1v0254300.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxysterol-binding protein; TAIR: AT4G08180.1 OSBP(oxysterol binding protein)-related protein 1C; Swiss-Prot: sp|Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C; TrEMBL-Plants: tr|A9ZM29|A9ZM29_SOYBN Oxysterol-binding protein; Found in the gene: LotjaGi1g1v0254300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:61225194..61231988) extracted from Lotus japonicus Gifu genome v1.2.
AAACAAATAACCTACAAAATCTGATTTATTTTTTCACATCTTTCTCTCAACTCATTCTAATTTCTTTCTTTCTCACCGCA ACCAACTAACGAAAGCATGAATGATCTCATCATCACAGAACATCAGAACATCAAATCATCATTCTCAACCAGCCTCACTC ATAGTATTTAAGGGCATCCATTTATCAGCAGTTTTCTTCTTCTCTCACCTCTCTCTCTCTCTCTCTCTCTCTATCCCTCT CTCTCTCTCTTCCCCTGCCACCTCATCCCACCGATAAATACATCTCCGATTGCTTTCTCCTCCCTCATACTCCATCTCAA ACATAATAATAATCTTTCATCTTTCATTTCATTTCGTTTCATTTTTACCTTCTCTCTAACCACACCGCGTACATTTATAT TTATTTACTTACTTACTCCTAATCTCTGCTTAGACGTAACCGTTTTTATCCCGCCCCCACTTCCATGTTTGATCGCATTA ACCTTCTCTTCCCAATCGCCGCCGCCACACTCCGCCGTCACCGCCACGTCACCGCCGCCGAATTCCCTTTCTCTCCGTCG CGCTCTACTCCATTCTCCACATGCATCCTTTCTGCTGCGTCTCCGCCATATCCGACCAGGCCTCTCCGGTGAAACCCTCA CCCCCTCCGTTCCCTGACTTCTCCACCATGCCTCCTCCTCCTCCACCGCCTCCTCCCGCCGCTGCCGTCGCTGTCAGATC CGATTCGGCTCCACGCCTCAGCCACTGCCGCAGTCACAGCGCTACTCAGTCCGTGACCATCAGCGAGCCCGGTCGCGTGA GCCAGCGGGAGCAGCAGCCGGTGGTGGTGGACGTGAAGATCAACGACCTCGTCGGGAACGGAATCTCCGGGATACTTCAC AAGTGGGTCAACTACGGCAAGGGATGGCGACCGCGCTGGTTCGTTCTCCAAGACGGTGTTCTCTCCTACTATAAGATTCA CGGACCTGATAAGATCGTCGTGAATCCAGAAACCGAGAAAGGCTCCAAGGTTATCGGCGAAGAATCCATGCGGAGGATCA CTCGCAACCGCAATTCTTCCTTTCCGTATCAACTCCGGCGAAAACCGTTTGGTGAAATCCATCTCAAGGTTTCTAAATTC TTGTCCAATTTTAGCTTAATTGAATCAATCTCTTATTGACTTTTGTTTTCGTGTAGAATTGGAATTGGAATTTGAATTTG AATTTGAATTTGATTTGATTCGTGTGTGTAGGTTTCAACGATTCGCGAGAGCAAATCGGATGAGAAGCGGTTTTCGGTGT TCACCGGAACGAAGAGGCTCCATTTGCGGGCGGAGACGCGGGAGGATCGGGTGGCGTGGGTGGAGGCGTTGCAGGCGGTG AAGGACATGTTCCCTCGGATTTCGAACAGTGAGTTGATGGCTCCGGTGGACAACGTGGCCATTTCAACTGAGAAGTTGAG ACTTCGGCTTCTGGAAGAAGGGGTGAGTGATGCAGCCATTCAGGACAGTGAGCAAATAATGAGGACTGAGTTTGCGGCGT TACAGAACCAACTCGTGCTGCTTAAGCAGAAGCAGTCGATCCTAATTGACACCATGCGGAATTTAGAGGTACTTCTTCTG AGATTGTATATGACAAGTTTGCTTTTTACAGCTGAAAATCAAAATGTTAATGGCTTCTCTGTGGTTTTGGATAAAGATAT GTTCACACTTTATTTCCTCTCACATGAAAAGTGATATAGGAATAGAAGAGAGAGAAATGATAGATATAATGTGTGATCTT ACCGAAAAAAGAAGAGATAGATAGAAAGAAAAGTGAGCGGTCAGAATGAATCAAAACTATCTCTGCTTTTAAATTTCATT TGAGAGAAGTGCAATTGTAAGTTGTAATAGTGACATTTAGTCAATCTCTCCCCTTTGTATTCTGTGCACACAATCCATTC TGTGGCTTGTTTTTGGATTATCGGAATCTATGGTTAGCTTACTGATAAAAAAAACCTCAATACTGTTAAGGAGGAAGTTA TGGGTTAATGGTTTGTTGTTGTGAAGTCTTTAAGCTTCTTTAGTCTTGTAACTTTTTGTTGAACTGTTCAACTGCACTTT GAGTACAGTTTCTCTTTTCCTGGCAGTCAATAATATGAAAATCTGGATATCGTTACTCATGGATGCATAATGTGAATAAT AATAATGGTAATATTATTATTATTATTAATTTGTTCCAATTAGACCCATTGAATCCTGCTTTGATGATAAGGTTGTGGCA TTGATTTAATTTCACTGAATTACCCAACAGTTTCGTGGTTTCCACCTTGTTTGCAAAATGTTTTCTTTTGTCTGTGGGCA GTTTTTATTTTTTTTCCACGATGCTTTCTCTTGTGTTTAACGTATTAAGGATAAAGATTTGTTTTCTGTATTAATTAACT TGCATTTGTATTACATTATTGTAGACAGAAAAGGTTGATCTGGAGAATACAGTCGTTGATGAGAGCCAGAGACAGTTGAA TGATCAAGAGGCTTCCTATGAATTAACACCAGAAAAATTTAGTGGTAAGCTTATTTAATTGTGATTATTAGGCATTAGTG CTCCCCATTCTCAACAGTAAGTCTTGTCTCTGGTTAGTTTTTATGGCCTTCTTCTATGTTGGCAAATGATTAAAACTTGA TAGTGAGACATTTCTGCATTAGCAATAGAGGAGTAATGTAGACGTTTTATTGATCTCGTGATGCATTTTCTTGAACTTGA AGTATTTATGCTTCACTGTCTCAGATACACTGATCCCCCTTCCGTTCCAATGTTTTTTCCTTAACTCCTTACATCTCTCT TTCTCTACATGTTAAATTCAAATAGTTTGTAATGCTTACTACTCATTCCTACTAACCAATTGTTTTAATCTAGTTGTGAT TTTCACAATTATTTATTTCATTTAATTTCAGAAGGAAGCGGGAGTGAATCTGAGGACGATAATGAGAGAAATGATGCTGC AGATGACGAAACAGATGATGACAATGTCTTCTTTGATACTCGTGATATTCTGTCAACCAGTTCTTTCAAAAGTAACGGGT CTGATCATAGAGTATCATCTTTCTCTTCAGATAATGAAGGGTTCTATGCATTTGAGTCCGAGGAGGATGTAGATCCTTCA ATTAGAAATGTCGGAACCAACCACCCTTATGTTAAGCGGCGTAGAAAATTGCCAGACCCAGTAGAGAAAGAGAAAGGTGT AAGTCTTTGGTCAATGATCAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCTC TCTCCTCGTTGCAAAAGTGTTTTGAAGAATTGGAATATTCATATCTGCTGGACCAAGCATATGAATGGGGAAGAAGGGTA AGTGTGAATTTGGCTGATAGCTCTATAATAAGTGAAATCTGAGCGCTTTAATATAATAATTTCATTTGATATGAGAAAAT TGTCGCACTATTGTTAACTGTTTGTGCTGTTGGCTCTTTCAATGCAGTCTTGAGTGTGTTCTTTCCATTTTTAACTAAAT GGATATGCCATGCAGGGTAATAGTCTCATGAGGATTCTCTACGTTGCTGCTTTTGCTATATCTGCTTATGCGTCGACAGA AGGAAGAGCTTGCAAACCATTTAATCCATTACTTGGGGAAACATACGAGGCTAACTATCCAGATAAAGGCCTTCGATTTT TCTCAGAGAAGGTATATAATCTCACCCTATAAGGATATTGTCAAAATATTACCTTTTTCAACCCAATCAAATCACAATAA TATTTTCTTTCTGTTTTCACCATAATTTATATATCTGTCAAAGGTTTCTTTCAAAATTCTAGCTTGGAGGAAAGTTATTT GAGTCATTTATCTGATGAAAATTGTATGCAATATCATCAATACTCACACTTTTGAATTCCTTCCAAGCACTTGTTTTTGT TTGAAAGGAACAGCGTTCCTGATATGGAGAACCAAAACTTTAGAAACTACACAACTTATTTAATGAATAAAAGGTTTAAT TGCTTGCATTAGTTCCATACATCCCTATGAACATAGTACAGTTTGGATTTGGATGCGAACAAGGACCTATCTATGTTGCC TATCTGAAATTTTTAATATTTCTGCTACCACTCAGGTCAGTCATCACCCTATGATAGTTGCATGTCACTGTGAGGGTACA GGATGGAAATTTTGGGGCGATAGCAACTTAAAGAGCAAGTTTTGGGGCCGATCAATTCAGCTTGACCCTGTTGGTTTTTT GACTTTGGAATTTGATGATGGGGAAGTTTTCCAGTGGAGCAAGGTATATTTTAACTGCTTCAACTGCTATGTTGTTCTGG TTTGGTTTTAAACTGAAGTGGACTTGTTCTTTCAGGTCACTACGTCAATATACAATCTCATACTGGGAAAGCTTTACTGT GATCACTATGGTACGATGCGCATACAGGGAAACCAAGAGTACTCGTGTAAACTGAAATTCAAAGAACAATCTATAATTGA TCGAAATCCTCATCAGGTGCTTTATATCTGTTGCTTGGGTTCTATTTTTTCAGATATAATATATGAATTTTGTTGCAGAG GTTTCTTCCTTCTTACTGTGGATTTAATTGCCCTTTTAGGTTCATGGTATCGTTGAAGATAGGAATGGAAAAACCGTATC AACTTTGTTTGGAAAATGGGATGAAAGCATGCATTATGTTAATGGAGACTACACTGGGAAGGGGAAAGGTCCTGAATCTT TGTCAGATGCCCGTTTACTCTGGAAGCGAAGCAAGCCTCCCACATTTCCTACTAGATATAACTTCACTCGCTTTGCCATC ACATTAAATGAACTTACCCCTGGATTGAAGGTCTGTTTTATTATTAACTGATACTGTCTTTTTTATTGCAGCTCTATTTC TCATTTTTTAAGGAAAGAATATTCCAGGAAAAGAATTGCATTTTCTACTGCAATTTGGGCTTACTTAAGCATGCTTTAAA TGAAGTTGACTTGGTTCTATTGATAATAAAGGAAAATGGAAATTGTGCAACATTGATGAAGCATAAAAATATTGATAATT TGACCATATCAAGAAAAGCCAAATTGTGCAACAAACCTGTCATCTTACTGTGCATATTATTTTCTGTGTGCACACATGGT GTTTGCTGTGTTTTTTGCATTTTGCTGAACATTCATTACCAATTTAATTTGTGAATACACAGGAGAAGTTGCCACCTACA GATTCCAGGCTAAGACCAGACCAAAGGTATTTGGAAAATGGGGAGTATGAGATGGCAAATTCAGAAAAGTTGCGACTAGA GCAGCGGCAACGCCAGGTACCTATTACATTTTATGTTCTCTAATTTTCTCTTTCATGGTTTCACCTTTAGCTCAGTACTT CAATAGACCTGAGAAGGTTTTATGCTAACTGGGTTTCATGTCATATCCTTATTTGCTAAGTTTAATTAGTTCCCGGTAGT GATTGATTTGAGTTCACTTCAGGCGCGAAAGATGCAAGAGAGTGGTTGGAAACCACGGTGGTTTGTGAAGGATAAAGCGA GCGGGACATACCGCTATTTAGGAGGGTATTGGGAGGCCAGAGATGAAGGAAAATGGGATTCCTGTCCTGACATCTTCGGC CAAATCCCTTCGGATCATCTTCCCAACGAAGGTCAAATTACATCTTAGCTTTTCAAATTTTTTTCCTCCAATTTTTTTAC TGATTGGTGTCTCGTGACTGCCAGTTCGCAGTTATGGTTAAACACCCGTGAAAATCAGGTATGTGTATGCCAATCAGATG CAAATATGAGCGAGTAATAATGCAATTCTTTTTCTCTCCATTGAAATGAATCCTCACTATTTGGTTGGTAAACAACCATT ATTGTAACTACTACTATATTACATAGGTGACAGGAATGCGTTAAATTATCATAGCTTAACAACGCGTTTTTTTCATAGCA TAACACCGCGTAGTAAAGCAAAAACGATTTCCCCGAGTCCATTACATTACATGCTTCAGTTAAAACTTCAATTGCGAGTC ATGTAAGCAGTTTGCCGAAGAAGAAAATGCGACCAAACATCATTTTCATGTTCTTTTGTAAAAGAACAAAATTTAGATAT AAAAAAATAAGGCTTAAACATTTAATTTTGCAAATTTTCAATAATTGGTTAAAGAAAATTATACATTAATTTAAAACTAA AAAATAATTATTGAAAAATAATGACAAATACTGATTAATTTTAATTTATGATGGGAGTTCAAAGGAAATAATATATTGTT CAGCTGTTGAATACATCGTTGAGTGATGATCATCCGTATGCGGAACTGCTTCTTCCTATTTTCCAGATTATTTGGCTCAT GTTAGGTTTGGTTTTCCTTTGGGCACCAACTTTTTTAATTTTCCGTTTGGGGAGTGTCACCGGTTGATTAACCTGGATAG CGGTGAGGTTGCGCCCTTTGCTTCCGCTCCTGTTTAGTGTTCTCTTAGGGCCTTGCCGCTCCTTTTAACTTTTTTTTGTC AAAAATTTCTTTAGTCTAAAATCTAAATCGCTGCATTCCAACATACTTAATAAAGCCTGATGGGTCATTGGGTCCCGATT CACCATGGACAAAAACAAGTAGAAGTATGCAACTATGCATGACCTTTACGCCACCCCTTCTGTCTGGTGCTAAGATATGA TGGAGAAAAGTAATATTGCTGTCCCTTGCACCTTATTTTGAAACTGGTAATTTGTGATTAATCTTCTCTGTAGCCAACAA TAATACAACATACCTAATTTTCTGAAATGAAATGCCTCAAACGGATGGGACATGGTGTCTACTGAAATCTCGAGC
CDS sequence (LotjaGi1g1v0254300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATCCTTTCTGCTGCGTCTCCGCCATATCCGACCAGGCCTCTCCGGTGAAACCCTCACCCCCTCCGTTCCCTGACTT CTCCACCATGCCTCCTCCTCCTCCACCGCCTCCTCCCGCCGCTGCCGTCGCTGTCAGATCCGATTCGGCTCCACGCCTCA GCCACTGCCGCAGTCACAGCGCTACTCAGTCCGTGACCATCAGCGAGCCCGGTCGCGTGAGCCAGCGGGAGCAGCAGCCG GTGGTGGTGGACGTGAAGATCAACGACCTCGTCGGGAACGGAATCTCCGGGATACTTCACAAGTGGGTCAACTACGGCAA GGGATGGCGACCGCGCTGGTTCGTTCTCCAAGACGGTGTTCTCTCCTACTATAAGATTCACGGACCTGATAAGATCGTCG TGAATCCAGAAACCGAGAAAGGCTCCAAGGTTATCGGCGAAGAATCCATGCGGAGGATCACTCGCAACCGCAATTCTTCC TTTCCGTATCAACTCCGGCGAAAACCGTTTGGTGAAATCCATCTCAAGGTTTCAACGATTCGCGAGAGCAAATCGGATGA GAAGCGGTTTTCGGTGTTCACCGGAACGAAGAGGCTCCATTTGCGGGCGGAGACGCGGGAGGATCGGGTGGCGTGGGTGG AGGCGTTGCAGGCGGTGAAGGACATGTTCCCTCGGATTTCGAACAGTGAGTTGATGGCTCCGGTGGACAACGTGGCCATT TCAACTGAGAAGTTGAGACTTCGGCTTCTGGAAGAAGGGGTGAGTGATGCAGCCATTCAGGACAGTGAGCAAATAATGAG GACTGAGTTTGCGGCGTTACAGAACCAACTCGTGCTGCTTAAGCAGAAGCAGTCGATCCTAATTGACACCATGCGGAATT TAGAGACAGAAAAGGTTGATCTGGAGAATACAGTCGTTGATGAGAGCCAGAGACAGTTGAATGATCAAGAGGCTTCCTAT GAATTAACACCAGAAAAATTTAGTGAAGGAAGCGGGAGTGAATCTGAGGACGATAATGAGAGAAATGATGCTGCAGATGA CGAAACAGATGATGACAATGTCTTCTTTGATACTCGTGATATTCTGTCAACCAGTTCTTTCAAAAGTAACGGGTCTGATC ATAGAGTATCATCTTTCTCTTCAGATAATGAAGGGTTCTATGCATTTGAGTCCGAGGAGGATGTAGATCCTTCAATTAGA AATGTCGGAACCAACCACCCTTATGTTAAGCGGCGTAGAAAATTGCCAGACCCAGTAGAGAAAGAGAAAGGTGTAAGTCT TTGGTCAATGATCAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCTCTCTCCT CGTTGCAAAAGTGTTTTGAAGAATTGGAATATTCATATCTGCTGGACCAAGCATATGAATGGGGAAGAAGGGGTAATAGT CTCATGAGGATTCTCTACGTTGCTGCTTTTGCTATATCTGCTTATGCGTCGACAGAAGGAAGAGCTTGCAAACCATTTAA TCCATTACTTGGGGAAACATACGAGGCTAACTATCCAGATAAAGGCCTTCGATTTTTCTCAGAGAAGGTCAGTCATCACC CTATGATAGTTGCATGTCACTGTGAGGGTACAGGATGGAAATTTTGGGGCGATAGCAACTTAAAGAGCAAGTTTTGGGGC CGATCAATTCAGCTTGACCCTGTTGGTTTTTTGACTTTGGAATTTGATGATGGGGAAGTTTTCCAGTGGAGCAAGGTCAC TACGTCAATATACAATCTCATACTGGGAAAGCTTTACTGTGATCACTATGGTACGATGCGCATACAGGGAAACCAAGAGT ACTCGTGTAAACTGAAATTCAAAGAACAATCTATAATTGATCGAAATCCTCATCAGGTTCATGGTATCGTTGAAGATAGG AATGGAAAAACCGTATCAACTTTGTTTGGAAAATGGGATGAAAGCATGCATTATGTTAATGGAGACTACACTGGGAAGGG GAAAGGTCCTGAATCTTTGTCAGATGCCCGTTTACTCTGGAAGCGAAGCAAGCCTCCCACATTTCCTACTAGATATAACT TCACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTGAAGGAGAAGTTGCCACCTACAGATTCCAGGCTAAGA CCAGACCAAAGGTATTTGGAAAATGGGGAGTATGAGATGGCAAATTCAGAAAAGTTGCGACTAGAGCAGCGGCAACGCCA GGCGCGAAAGATGCAAGAGAGTGGTTGGAAACCACGGTGGTTTGTGAAGGATAAAGCGAGCGGGACATACCGCTATTTAG GAGGGTATTGGGAGGCCAGAGATGAAGGAAAATGGGATTCCTGTCCTGACATCTTCGGCCAAATCCCTTCGGATCATCTT CCCAACGAAGGTCAAATTACATCTTAG
Protein sequence (LotjaGi1g1v0254300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHPFCCVSAISDQASPVKPSPPPFPDFSTMPPPPPPPPPAAAVAVRSDSAPRLSHCRSHSATQSVTISEPGRVSQREQQP VVVDVKINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSKVIGEESMRRITRNRNSS FPYQLRRKPFGEIHLKVSTIRESKSDEKRFSVFTGTKRLHLRAETREDRVAWVEALQAVKDMFPRISNSELMAPVDNVAI STEKLRLRLLEEGVSDAAIQDSEQIMRTEFAALQNQLVLLKQKQSILIDTMRNLETEKVDLENTVVDESQRQLNDQEASY ELTPEKFSEGSGSESEDDNERNDAADDETDDDNVFFDTRDILSTSSFKSNGSDHRVSSFSSDNEGFYAFESEEDVDPSIR NVGTNHPYVKRRRKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEELEYSYLLDQAYEWGRRGNS LMRILYVAAFAISAYASTEGRACKPFNPLLGETYEANYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWG RSIQLDPVGFLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVHGIVEDR NGKTVSTLFGKWDESMHYVNGDYTGKGKGPESLSDARLLWKRSKPPTFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLR PDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWKPRWFVKDKASGTYRYLGGYWEARDEGKWDSCPDIFGQIPSDHL PNEGQITS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 800 | 800 | 0.0 | – | |
| PANTHER | 1 | 800 | 800 | 0.0 | ||
| MobiDBLite | 12 | 51 | 40 | - | – | |
| MobiDBLite | 16 | 42 | 27 | - | – | |
| ProSiteProfiles | 92 | 221 | 130 | 13.233 | ||
| SMART | 93 | 223 | 131 | 1.0E-18 | ||
| CDD | 95 | 228 | 134 | 6.6047E-57 | – | |
| SUPERFAMILY | 96 | 225 | 130 | 1.16E-20 | – | |
| Pfam | 100 | 218 | 119 | 2.5E-17 | – | |
| Coils | 291 | 311 | 21 | - | – | |
| MobiDBLite | 308 | 329 | 22 | - | – | |
| MobiDBLite | 308 | 355 | 48 | - | – | |
| MobiDBLite | 339 | 354 | 16 | - | – | |
| SUPERFAMILY | 421 | 800 | 380 | 1.07E-121 | ||
| Pfam | 426 | 778 | 353 | 1.1E-125 | ||
| Gene3D | 511 | 679 | 169 | 1.5E-25 | – | |
| Coils | 731 | 751 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0254300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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