Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0257500 |
| Transcript ID | LotjaGi1g1v0257500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidylinositol-4-phosphate 5-kinase; TAIR: AT1G77660.1 Histone H3 K4-specific methyltransferase SET7/9 family protein; Swiss-Prot: sp|Q56YP2|PI5K1_ARATH Phosphatidylinositol 4-phosphate 5-kinase 1; TrEMBL-Plants: tr|V7AUX3|V7AUX3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0257500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:62371100..62373565) extracted from Lotus japonicus Gifu genome v1.2.
TTTATCTTCATCGTAACCTTCACTTCACTTCCCAACTTCAACCACTCAACAAAACAAAACAACACTCTCTCTCTTTTTCT TCTCTCTCTGTTTTACACTAGTTTCTATTTCTATTCCAATTGAGAGTGGTTTCTCTTCTTTGTGTGTTGTGTGTTCTTGA GTGAGTGTTGAATTGAGTTGAATGATGTTGTTACTCAAAAAATGGAAACAACTCAAAAGAGCCAAACAAAGCTAACACGA ACCCAATCCTCATTACTCGTTTCTTCATCCCCAACTCTCCGATCTTCCATTCACAACTTCTCCTCCATCATAATCAAAGA CGAACAGCAACAACACGTGGCAGCGGCGTCTTCACACCGCCACGAAGAAGCAGACAACGATGACAAGAAAACCAAGAAAC CCCTCATCAACCCGACCCGGAGTCACAAATGGATCCACTATCCCACCGGCTCGACCCGGTTATCCAACCCGATTCTCGCG GTGGTTTCGTTCGGTTTCCTCGGCGCGTGCTCGCTCTGGTTCTACATACAAACCGGCGAGGTGAGACCCACCTCGGAGAA CGTGCTTCTCGCGTTGATCTTCGTCGCCGTCGCGCTCTACTTCGCTTCCCGGAACAAACGCCTCATCCACCACGCGGTGT CGTTAGTCAAGGTGAGGCGGTTCGGGTTCGGGTTTGGATTCTGCAAATCGCCGGCGAAGCCGGTGCAGTGGTTCATCGGG GACTCCGACGGCGACGGCGAAGGCGACGGCAAGCCGTCGCCGGCGGTGAGGGAGGGGGTGGAGTTTTACAGCAATGGGGA TTTCTACGAAGGGGAGTTTCACAGAGGGAGGAGCAATGGGAGCGGGGTGTACAATTACTTTGTGAATGGGAGATACGAAG GGGATTGGATCGATGGGAGGTACGATGGGTATGGAATTGAGAGCTGGGCGAGGGGGAGTCGCTATAGGGGACAGTACAGG CATGGGTTGAGGCATGGTTATGGGGTTTACAGGTTCTACACTGGGGATTCTTATTCTGGTGAGTGGTTTAATGGTCAGAG CCATGGATTTGGAATGCAAACTTGCTCTGATGCTAGCACTTACATTGGTCACTTCAAACATGGTGTTAAGCATGGCCTTG GTTGTTACCATTTTAGGTCAGTTTCTTGTTCTTATGGTGTGTTTTGGCTTGGATATGTTTACCTGTTATTAGCAGTGTAA ATCTTTGTTATGTTAAATTGTTTGTTGGATTTGCAATTTTCAGAATGGAACAGTTGATTTTGTTGTTCATGTTGTGGTTG ATTTCTTGGATTGTTTTAGATATGTCATTGATTCTTTACTGATTTTGGTGAAGGTGAAAAGTTGTATTTGAAAGATTAAA ATTTTGTTGCTATACTTGTTTTATTTAGATTTGCAATTCTGGAGAGGACCTAGATGTATCTAACTTTTCTCTGTTTCAAT TTTGAGTTCTTCATTTTTTTTTTAAGATTCTTCTACCACTTTATGAACTGCTGCTTTTCACTTTTCTTCTTTCTTTGCTT TACAGAATTTGAAGTTAAACTAAGTACTTCTTTGTACTTTGCTTTTGATACAATGGATCATACATTGACTTGTTTCATGT CTTAATTGTCAAATTTGAAATGGCCAACACTGATTTTTTCATCTCTTGTTCAAAAGATAGGGCATGATCTTATTGAATTA ATGGTACTATTGCAAAGATAGGGCATGATCTTATTGAATTGATGTGTTTAAAAGACATTGTTTCTAATTCATTGTATGTT CTGTTTTGCTGCAGGAATGGGGATCAATATGCGGGAGAGTACTTTGGAGACAAAATACACGGATTTGGGGTCTACCACTT TGCCAATGGCCATTATTATGAAGGAGCATGGCATGAGGGGCGTAGGCAAGGTATCGGCGCATATATTTTCCGAAACGGTG ACCGAAGGTGTGGTGAATGGGATGCTGGCAACCTCAAGCATCCTCTACCACCACTTGCTGAAGTTGTACTTCGCGCAGTT CAGGTGTTTGTTGTGATGCATTTATTGAGTATTTCCGTTCATAGTTGACTTCATGCAACAAAATCCCTTTTGGTTGGTGT TTTTCACCTTTTCTCATGTTCTGCTTTAATGGGTCAAATTGCAGGCTGCTAGGAAAACAGCAGAGAATGCTATAAACCTC AAGCGCGTTGATGACCAGGTTAACAAAGCAGTGATCGCTGCTAACAAGGCTGCCACTGCTGCTAGAGTTGCTGCAGTGAA AGCTGTTCAGAACAGAATGGATGGAAAATTTTGTGAGACTGATGTCTATGAGTTAGATGTTTAGTTTGGAATTGTAAATT TTTCACTAATTTCAAGTATTTGGAAGAAGATGTCAATGTCACCCCTGTGAGCTAAAGAGCTCACTGGAGGTTGAAAAGAG CTTGTTTTCACCACACTGTAACTTGTATATAAACCATGTATATCAAAGAAAGATGAGTTTTTCTCA
CDS sequence (LotjaGi1g1v0257500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACAACTCAAAAGAGCCAAACAAAGCTAACACGAACCCAATCCTCATTACTCGTTTCTTCATCCCCAACTCTCCG ATCTTCCATTCACAACTTCTCCTCCATCATAATCAAAGACGAACAGCAACAACACGTGGCAGCGGCGTCTTCACACCGCC ACGAAGAAGCAGACAACGATGACAAGAAAACCAAGAAACCCCTCATCAACCCGACCCGGAGTCACAAATGGATCCACTAT CCCACCGGCTCGACCCGGTTATCCAACCCGATTCTCGCGGTGGTTTCGTTCGGTTTCCTCGGCGCGTGCTCGCTCTGGTT CTACATACAAACCGGCGAGGTGAGACCCACCTCGGAGAACGTGCTTCTCGCGTTGATCTTCGTCGCCGTCGCGCTCTACT TCGCTTCCCGGAACAAACGCCTCATCCACCACGCGGTGTCGTTAGTCAAGGTGAGGCGGTTCGGGTTCGGGTTTGGATTC TGCAAATCGCCGGCGAAGCCGGTGCAGTGGTTCATCGGGGACTCCGACGGCGACGGCGAAGGCGACGGCAAGCCGTCGCC GGCGGTGAGGGAGGGGGTGGAGTTTTACAGCAATGGGGATTTCTACGAAGGGGAGTTTCACAGAGGGAGGAGCAATGGGA GCGGGGTGTACAATTACTTTGTGAATGGGAGATACGAAGGGGATTGGATCGATGGGAGGTACGATGGGTATGGAATTGAG AGCTGGGCGAGGGGGAGTCGCTATAGGGGACAGTACAGGCATGGGTTGAGGCATGGTTATGGGGTTTACAGGTTCTACAC TGGGGATTCTTATTCTGGTGAGTGGTTTAATGGTCAGAGCCATGGATTTGGAATGCAAACTTGCTCTGATGCTAGCACTT ACATTGGTCACTTCAAACATGGTGTTAAGCATGGCCTTGGTTGTTACCATTTTAGGAATGGGGATCAATATGCGGGAGAG TACTTTGGAGACAAAATACACGGATTTGGGGTCTACCACTTTGCCAATGGCCATTATTATGAAGGAGCATGGCATGAGGG GCGTAGGCAAGGTATCGGCGCATATATTTTCCGAAACGGTGACCGAAGGTGTGGTGAATGGGATGCTGGCAACCTCAAGC ATCCTCTACCACCACTTGCTGAAGTTGTACTTCGCGCAGTTCAGGTGTTTGTTGTGATGCATTTATTGAGTATTTCCGTT CATAGTTGA
Protein sequence (LotjaGi1g1v0257500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
METTQKSQTKLTRTQSSLLVSSSPTLRSSIHNFSSIIIKDEQQQHVAAASSHRHEEADNDDKKTKKPLINPTRSHKWIHY PTGSTRLSNPILAVVSFGFLGACSLWFYIQTGEVRPTSENVLLALIFVAVALYFASRNKRLIHHAVSLVKVRRFGFGFGF CKSPAKPVQWFIGDSDGDGEGDGKPSPAVREGVEFYSNGDFYEGEFHRGRSNGSGVYNYFVNGRYEGDWIDGRYDGYGIE SWARGSRYRGQYRHGLRHGYGVYRFYTGDSYSGEWFNGQSHGFGMQTCSDASTYIGHFKHGVKHGLGCYHFRNGDQYAGE YFGDKIHGFGVYHFANGHYYEGAWHEGRRQGIGAYIFRNGDRRCGEWDAGNLKHPLPPLAEVVLRAVQVFVVMHLLSISV HS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 90 | 90 | - | – | |
| PANTHER | 4 | 388 | 385 | 8.4E-159 | – | |
| PANTHER | 4 | 388 | 385 | 8.4E-159 | – | |
| MobiDBLite | 47 | 68 | 22 | - | – | |
| MobiDBLite | 47 | 69 | 23 | - | – | |
| TMHMM | 87 | 109 | 23 | - | – | |
| Phobius | 91 | 109 | 19 | - | – | |
| Phobius | 110 | 120 | 11 | - | – | |
| TMHMM | 119 | 136 | 18 | - | – | |
| Phobius | 121 | 136 | 16 | - | – | |
| Phobius | 137 | 381 | 245 | - | – | |
| Gene3D | 189 | 251 | 63 | 5.4E-7 | – | |
| SMART | 200 | 222 | 23 | 0.24 | ||
| Pfam | 202 | 219 | 18 | 0.0082 | ||
| SMART | 223 | 244 | 22 | 1.4 | ||
| Pfam | 225 | 247 | 23 | 1.3E-4 | ||
| SUPERFAMILY | 242 | 370 | 129 | 1.18E-31 | – | |
| SMART | 246 | 267 | 22 | 1.5E-4 | ||
| Pfam | 248 | 269 | 22 | 9.1E-6 | ||
| Gene3D | 252 | 324 | 73 | 1.2E-12 | – | |
| SMART | 269 | 290 | 22 | 1.2E-4 | ||
| Pfam | 271 | 290 | 20 | 1.4E-4 | ||
| SMART | 292 | 313 | 22 | 1.9E-4 | ||
| Pfam | 294 | 315 | 22 | 4.8E-6 | ||
| SMART | 315 | 336 | 22 | 4.9E-5 | ||
| Pfam | 317 | 338 | 22 | 4.3E-5 | ||
| SMART | 338 | 359 | 22 | 0.0058 | ||
| Pfam | 340 | 362 | 23 | 2.3E-5 | ||
| Phobius | 382 | 400 | 19 | - | – | |
| Phobius | 401 | 402 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0257500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…