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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0258600 |
| Transcript ID | LotjaGi1g1v0258600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT4G08290.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290; TrEMBL-Plants: tr|G7J316|G7J316_MEDTR WAT1-related protein; Found in the gene: LotjaGi1g1v0258600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:62656151..62660904) extracted from Lotus japonicus Gifu genome v1.2.
AATCAACCAAACAGGGTACTCCCACTAGATAATAATATAGCTTTCATTTAAGAGGATTAAAAGTGGAAACTTTAAAACTG GGAGGGCTAAGATTCTTATCACTTATCCTCTTGCTCTCTCACTAATGCAATTTGTCTTAATCATCACTCTTGGTCTTGGG TGTTTATAAGGAAACCCAGTTGACACACTTGAGAGTACCTCATCATCATTCATCATAGAGTTTCCAAACAATAGCTGCAA TTTTTTCCTTATTTTCTCAAACACTACAAGAATGAAAGAAATATGTGGTGCTAATTTTGGCAAGAGAATGATTAAGGCAA AGCCTTATTTGTTAACTGTGGGGCTGCAGTTTGGGTTTGCAGGAGCATACATCATTTCCATGGCCAGTATCAACCATGGA ATGAATCGTTTTGTGTTCATTGTTTATCGCAATGTCATTGCTGCAATTGCTCTGGCTCCTTTTGCACTGATTTTTGAAAG GTGCTATTGCTATATCTACCCTGTTTCACTTTGTATTTGATGTATTATTTCTTTCGAAAATATGTATTTGGGCTATTATA CATGATACAGTGGCTAACGTACCGTGTGATAAAAGTTTAAAGGTGGAATTTACCTTATCTTTGTCTAATTCCCTATTTTC TTACAATTTTGCAGGAAAGTTAGGCCAAAGATGACAATCTCTGTCTTTATGCAGATAATGGCGCTCGCATTTTTGGAGTA ATGATCTAATACCTGTCTATATAGTTAGCATCAGTATACCCTCATTAAAGATAGCCTCATTATTTTGAAAACATGTAATT ACCAATGAGCTAAATGCCGTTGCAAAATCTTATCAATGGTGGTCACTAAAGCATGTTTTTGAGAAAAATATAAAAAAAAG TGTTATCGAAAGTCTACATTGTCAGTAAGTTAGCGGCAAGTGACTCCTTTAGCAGGATTAGTTATCGCCAACTTACCAAT TGTCAAAGCTGTCGGTATTTTAAAATATGACCGCCTAATTACCAAAGATTAAGTAATCATTAACTTGGCGGTCTGCCTAA ATTATGGTTGTGTAACTTGACGTTCTTTTTAAACTTTGGTCATTGGGTTAGCCCTCATTAGCTTGATGGTCTTTTCAAAT TCAGGTAATTTCAAATTTTTCTAAAACTATTGATGATTAAAGTTGTTAGTTACAAGTTCAAAAAAAAAGTTGTCAGTTAC TCGACGTTCTTTTTAAATTATGGTCGCCAACCTATAATGTTTTTAAAACTTATTTAAATAAAAATAAATATATTATAGAT TCACTTTTAATGATTTATAATAAAAATAGTTTCCCAAATGAATTTAATAACTAAAAATTAGCCATGAAAACAAGTTTAAT ACAGACAATATTAATCTTTTTTTTTAGAAAATAGAAACAACTTATTGTTGATTGAAGATTTCCTTGAGATTCCAAATGGA AAATACACTTAGTTCCTGTTTGGTAGTTAGGATAGGATATGATATGTGAATAGGATATCAACAGGATAGGATAAGAGCAG GATAGACTCTTATCATATCCTGTGTTTGATGTGCACATGATAAGGACATGATATGATAAAGAAAAATGTATCAGATTTAT ATTTGAATAAAAAATACATTTAAAATTGATCATTCTATTAAATTTAATTTCTTTACATTTTCATGAATGAGTCTATATTT TAAAATAAATAAAATTAATTTTAAATTTTATTAATTAGCCTATTTTATTGTTTTGAAGATACCCTATATTTTAAATAAAA TTATGCAGTTAACCGATTGGTTTTCACTTAGTTGTGACACGTGATAATTAACAATAAAAGTTAACTAAATTAAGAATATA AGTAGATAAGTAGTTTTAAATAATAAGAGATGAAAATAAAAAATTAATCTATTACTATTAAAAAATCAATATTTGTAATC AATGTTTTTCACTTAGTTGTGACACGTGATAAATAATAAAAAATAACTAAATTAAAAATATTATTATTTCAAAATACTTT ATATTTAAATTATTATATAAGTAGATAAATAATTTTTAAATAATAGGAGATGAAAATATTAAATTAGTCTATTATTATTA ATAAATCAATATTTGTAAGTGAGTAGTCTATTTTACTATTTATGAATAAAAATTTTATTTATTTTTTTATTTTAGTTAAA TTAATATTTTTATATTCATTAATTAATATTATTATAAATTATAAATTATATAATATTAAAATAAATTAATTTGGAGTTAG GATACTGAAAGAAAATATATAACTGGTATCTTATCCTGCTCTATCCTAACTCCCCCTCAGGATAACTTTTACACATGATT GACAGGATATGATAGAAGACAGGATAGTGTTATCATATCCTGCTGGCGCAACAAACAACAGATAACAACAAGATATGATT AATTATCCTGTCCTATCCTATCCTGTCCTGGTCACCAAACGGGCCCTTAAGGGAAATATGAATGTTTGTCAAAGAAAGCT CATATAGGTAAGAAGTTCTACTTGTAGCAAGAAAATAAGTAAAACAATTATAACTATTTTTCCGAATCACATGAAATCCC TGTGCTGCTAATTTCCTTCCCTCTAGAGTCAATCCTATTGAACATTTAAAAGTTTCCATGATTTTACAGTATTAACTATT ATCCAACCCACATCAAGTTAAGAATCATTTTCGATTACTACCTTTTTAATCTAAAATTATTGACTGGGAAGCAAGACATT TAAAATAGTCAGAACTTTCAGCTTCATAATTAGGCTTTTGCCCTTATTCATTATCATTAAACTAAACCTATGTTTGGTTG GAGGGAGAGGAAAGGAAAGGAAAGGAAAACACGGAAATCGAGGAGTGAACTTGGACTAATCACTCCTCGATTTCCGTGTT TTCCTTTCCTTTCCTTTCCTCTCCCTCCAACCAAACATAACCTAAGTGAATGACGGAATATGTACTCACTTCAGACTAAG AAATTAAGAAATTTAAGCACAATTTGTTTCTCCTTTAGTTTCTAAAATAATATTGATGATAGTACTGTAATACTAATACC CTATGCCATGTGATATTTTAGGCCAGTGATTGATCAAGGGTTCACTTTCTTGGGAATGCAATATACTTCAGCATCCTTTG CATCTGCTATGATGAATGCTGTGCCCTCCGTCACCTTTGTGCTAGCTTTAATTCTCAGGTAAGGTTTAGTTTATAGAAGA TGCTGATTATAAGAAAGTAATGCGAAATTTATGTGTGTAATACCACTTGCATGTTTTTTTTGTTTTGTATCAGATTAGAG CGTGTAAATCTTAAGCAGATACAAGGCATAGCTAAGGTGATTGGGACGTTGGTTACATTTGGAGGGGCATTAGTAATGAC ACTTTACAAAGGCCCTCTTATTAACCTTTTGAGTTCTTCAAAAACAAGCCACCACCAAAATGGAACTCACTCCCCTCAGA GTCCCAGGCACTGGATCTCAGGGACTCTCTTTCTGCTCCTTGGTTGTTTGGCTTGGTCATCCTTCTTCATTTTACAGTCG GTGACATTGAAAAGGTATCCGGCGGAAATATCACTGTCCTGCTTGATATGCACTATGGGTGCTTTGCAAGGACTGGTGGT GGCACTGGTGGCGGGGCATCACTCTGGGGTTGCGGCATGGGCCATCGGTTGGGACTTTAGGCTCTATGGTCCTCTATACT TGGTCAGTATGCTCCATCACAACAATTTTGTTTCATCTTCAATCTCAAATATTGATAACTTACTGCATAATTAAGAAGAT GCTTTGAGTTAGTACTCCAACTAAATTTGAACTTTTTAATTCTTTCAATAATTGAAATTACATAGTGCACATAAGTTGGA GTTTTTCTTCATAGTCAATTTTAAAATTACAGGGAATAGTTACCTCAGGAATCACGTATTATGTGCAAGGTGTAGTATTG CAAAGCAGAGACCCAGTATTCTTAACAGCGTTTAGTCCCCTTTGCATGATCATCACTTCTGCTTTAGGCTACTTCATTTT GGCAGAGCAACTTCACTTGGGCAGGTATGTATCTAATCCTACTTTTTTTGTTTCAAAATATTTTGTATATACTTTTCTTC AAAGAAAGTACACAACACTTGATTACCCCCATAAATGGTTACTACAAGAGCTTAATTGGTCACAACTATGTCATTTCCCA TATATGGTTCACAGTTCACACACCTTGTTATTTTCATTTCAGTATCATTGGAGCCATTGTTATCGTCATGGGTCTTTATT TTGTGATGTGGGGCAAAGGCAAAGAGCATTCAGACACCAAGTTACAATCACCTACAACTAAGCAAACAGAGACACAGCAG CTTCCAATTACCTCATCTGATAACTAACAGAATTAAATGGCCACAGGAATTTATGAATATTTTTCCTTTTCTGTCTTAAA CATCTGCACTAGCTATGTATATTCCTTCATGTATGCTTTTGCGGTTTTAACATTATGAAGTTAATGGATTGTATCAAATT GCTCATCAGCCTGTATCCATAACTTCTCTATAATTCAGAAAGATATCTTTGATGTGAAGATTTGCTTTAATTACTTGACT TTGTCATTTCGGGTTCATCATCTTTTCTTTTTGATAAGCAAAAATTATATTCATATAAAAGAGAAGAAGATGATCACCTA AGCCTAAGGTGCCCATAAGAGCATAAAAGCAATCATCACTAGCTTTCAACGAAATATAGATCTAACTCTTATCAATTCTA TACCATGTCCTCATTAAACTAATCATTTTGAAAC
CDS sequence (LotjaGi1g1v0258600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGAAATATGTGGTGCTAATTTTGGCAAGAGAATGATTAAGGCAAAGCCTTATTTGTTAACTGTGGGGCTGCAGTT TGGGTTTGCAGGAGCATACATCATTTCCATGGCCAGTATCAACCATGGAATGAATCGTTTTGTGTTCATTGTTTATCGCA ATGTCATTGCTGCAATTGCTCTGGCTCCTTTTGCACTGATTTTTGAAAGGAAAGTTAGGCCAAAGATGACAATCTCTGTC TTTATGCAGATAATGGCGCTCGCATTTTTGGAGCCAGTGATTGATCAAGGGTTCACTTTCTTGGGAATGCAATATACTTC AGCATCCTTTGCATCTGCTATGATGAATGCTGTGCCCTCCGTCACCTTTGTGCTAGCTTTAATTCTCAGATTAGAGCGTG TAAATCTTAAGCAGATACAAGGCATAGCTAAGGTGATTGGGACGTTGGTTACATTTGGAGGGGCATTAGTAATGACACTT TACAAAGGCCCTCTTATTAACCTTTTGAGTTCTTCAAAAACAAGCCACCACCAAAATGGAACTCACTCCCCTCAGAGTCC CAGGCACTGGATCTCAGGGACTCTCTTTCTGCTCCTTGGTTGTTTGGCTTGGTCATCCTTCTTCATTTTACAGTCGGTGA CATTGAAAAGGTATCCGGCGGAAATATCACTGTCCTGCTTGATATGCACTATGGGTGCTTTGCAAGGACTGGTGGTGGCA CTGGTGGCGGGGCATCACTCTGGGGTTGCGGCATGGGCCATCGGTTGGGACTTTAGGCTCTATGGTCCTCTATACTTGGG AATAGTTACCTCAGGAATCACGTATTATGTGCAAGGTGTAGTATTGCAAAGCAGAGACCCAGTATTCTTAACAGCGTTTA GTCCCCTTTGCATGATCATCACTTCTGCTTTAGGCTACTTCATTTTGGCAGAGCAACTTCACTTGGGCAGTATCATTGGA GCCATTGTTATCGTCATGGGTCTTTATTTTGTGATGTGGGGCAAAGGCAAAGAGCATTCAGACACCAAGTTACAATCACC TACAACTAAGCAAACAGAGACACAGCAGCTTCCAATTACCTCATCTGATAACTAA
Protein sequence (LotjaGi1g1v0258600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKEICGANFGKRMIKAKPYLLTVGLQFGFAGAYIISMASINHGMNRFVFIVYRNVIAAIALAPFALIFERKVRPKMTISV FMQIMALAFLEPVIDQGFTFLGMQYTSASFASAMMNAVPSVTFVLALILRLERVNLKQIQGIAKVIGTLVTFGGALVMTL YKGPLINLLSSSKTSHHQNGTHSPQSPRHWISGTLFLLLGCLAWSSFFILQSVTLKRYPAEISLSCLICTMGALQGLVVA LVAGHHSGVAAWAIGWDFRLYGPLYLGIVTSGITYYVQGVVLQSRDPVFLTAFSPLCMIITSALGYFILAEQLHLGSIIG AIVIVMGLYFVMWGKGKEHSDTKLQSPTTKQTETQQLPITSSDN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 11 | 346 | 336 | 1.1E-178 | ||
| PANTHER | 11 | 346 | 336 | 1.1E-178 | – | |
| Phobius | 20 | 40 | 21 | - | – | |
| TMHMM | 20 | 39 | 20 | - | – | |
| Pfam | 29 | 147 | 119 | 2.4E-13 | ||
| Phobius | 41 | 45 | 5 | - | – | |
| Phobius | 46 | 68 | 23 | - | – | |
| TMHMM | 49 | 68 | 20 | - | – | |
| SUPERFAMILY | 52 | 147 | 96 | 6.28E-9 | – | |
| Phobius | 69 | 79 | 11 | - | – | |
| TMHMM | 80 | 102 | 23 | - | – | |
| Phobius | 80 | 102 | 23 | - | – | |
| Phobius | 103 | 107 | 5 | - | – | |
| TMHMM | 107 | 129 | 23 | - | – | |
| Phobius | 108 | 129 | 22 | - | – | |
| Phobius | 130 | 140 | 11 | - | – | |
| Phobius | 141 | 161 | 21 | - | – | |
| TMHMM | 142 | 161 | 20 | - | – | |
| Phobius | 162 | 189 | 28 | - | – | |
| TMHMM | 188 | 210 | 23 | - | – | |
| Phobius | 190 | 210 | 21 | - | – | |
| Pfam | 192 | 332 | 141 | 1.4E-9 | ||
| Phobius | 211 | 221 | 11 | - | – | |
| TMHMM | 222 | 244 | 23 | - | – | |
| Phobius | 222 | 244 | 23 | - | – | |
| Phobius | 245 | 263 | 19 | - | – | |
| SUPERFAMILY | 252 | 337 | 86 | 2.48E-8 | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 264 | 282 | 19 | - | – | |
| Phobius | 283 | 288 | 6 | - | – | |
| TMHMM | 288 | 310 | 23 | - | – | |
| Phobius | 289 | 309 | 21 | - | – | |
| Phobius | 310 | 314 | 5 | - | – | |
| Phobius | 315 | 333 | 19 | - | – | |
| TMHMM | 315 | 334 | 20 | - | – | |
| Phobius | 334 | 364 | 31 | - | – | |
| MobiDBLite | 340 | 364 | 25 | - | – | |
| MobiDBLite | 345 | 364 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0258600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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