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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0258800 |
| Transcript ID | LotjaGi1g1v0258800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT4G08300.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300; TrEMBL-Plants: tr|V9PJ01|V9PJ01_CICAR WAT1-related protein; Found in the gene: LotjaGi1g1v0258800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:62735129..62740222) extracted from Lotus japonicus Gifu genome v1.2.
GGAAAATGGATAAGGGAATCTCAATAGGGTGAAAATTGAAGTGAGAGAGTTAGTGCCAATGACAAGCGAAGGTGTTGTGT GTGAAATTGGGGCTTCTTTTTCAATAATTTAGCTTTTTTGTTCTATAAAAGGAGCATTTTGCGTTTTGAGGCTCACCACC CACAACACCTCACAAGTGTCACATAGCGTAGCACGTACTGTGTTTTGTGTGTGTCATAGAGTGAGAGAGTTAAGAGATGG AGGAGCAAAATGGTAGCAAAATGGGTTTTCTTCACAAGGTGAAGCCTTACCTTGCAATAGTGTCCCTTCAGTTTGGCTAC TCTGGGATGTATGTCATCACCATGGTTTCTTTCAAACATGGCATGAGCCATTGGATACTCTCTGTGTACCGTCATGTAGT TGCCCTCATCATTATAGCTCCTTTTGCCTTTGTCCTTGAAAGGTATATTATTACATCGAGTGCTTATATACAGATATATG CAAATTTTCTATATCTTTTAATCACATGATTTAATAGCGGTTTTTAACCCTCACAAATTAGGATTGTTAAAAACTGTCGT TAAAACGAGTGTCGGAAATGTAATCATGGCCAATCATTTCTGTTATATTTTATCTATCTTCTATCTCTTTTTTAATGCAT GCTTAGAAACTCTTTCATAATTGATTTTAAAGTTGGAATCAAGTGTGAAGGAAAACATTGTGTGTGTCATTTTGACATTC CAAAATTGATTATGGTGAAATAGAAGTTGATTCAAACATTGTTATGAGTACATATACGAAGTAGGAGCTTTTATTGTTCT TCTCAAGCTCCTCCTTTTTCATGGACAAGCTTAACAAATAAGGTTATGTTTTGATTATCATCTATTTTGCAGAAAAATAA GGCCAAAGATGACTCTTCCCATCTTCCTCAGGATAGTGGCGCTTGGGTTCCTTGAGTAAGAGACTCTTCCTCACACTTTT TCTACATATACCATTCACAGCATCGAATATAGCTTGTTACTTCTTTCTCAGTATCTCAATGAGTTCGACCCTGTCTGAGA TATTTTTATGTGCAAAATGCATGCATGCATGCGTAGGTAGCTATATATATAAATAATACTTAAGTAAAATGGTTTTTTAA TTGTTGGGAATTAAAAAAGACTCTTGGCCGGGGAAGATAAACAATCATAAGCACTTAGTAAAATAGTAACTTTAACCTTT CAAAAACAAAATTTTCTTTCAAAAAAAAAATAGTAACTTTAACATTGATTTGTTGGTTTGTTTTTTATAATTTGTACTTA TTCTTGACTTATGCCAGCACTTTCACCTTGTTTACTCAACAACCAACAAAACCACCATAAGATTATTTATGGGATACACA TGATATATTTTAACAACATACATAAATAAATAGTTGCAAATTAAACGCAAAAATGTTTAATAGTGACTACTTAAGTATGA AGCTTATTAAACTTCCAACATTGCTATTTCTTTTTATTTCCCCTATGTATATGGGTTAAGAACCCTTTTATCATTGGTCG AATACAATTTGGCTTATTAGAAAAAACTTTCTAACATGGGAAGAACCCTACTATGATCGAGATAGTGCCCAATTTAACTC TTGGCGCTTCGATTCATAAAAAAAATGATTGAGATAGTGATAACCGGCCGGCGGTGTTTTTCCGCTTTTATTTAGTTGCA AATTGATTTTGATGTGTATCCCATTGAAAATGAAATTGAAAAAAGAAATTAAAAAGGAAAAAAGTCACACTTATATTATA AATTTGAATTCTCTTAACCTCAATGAGACCACATCATACTCTTAATTTTTTTCTTCAATATGTGTTCGAACTCTTAATTC TTATAAAACCATATATAACTTTTTAAATATATTACATTTTATAGTAAATTAAATTAATATTAATTTTTATTTAATTAACC GTTCAATATGAAAATTATATTTTTGTTAATTATTTAATCATGATTAAAACTATTACAATTAAATATCAAATAATAGTTGT AAATAATGATTAATACTTTTAATTTATTTCCAATTATTTTTTGATAATATTAAATCATTAATATATAAAAAATTAAAATT AGTTTTTTATATTTACCCGTGAATTCCACGGAAGATTATCACCTAATAATGATACTTTATATTTCCCCACCTTTTCTAGT GGATACATCAAACTAAATAAAGTTTTTTTTTTTGGAAGGCATCAAACTAAATAAAGTGATCCACTACAAACCAATTTTTT TTTAAACCTCACTACAAATCATTAACAAAACGCAATTTTTCCATCAGAATTTCATTTCATATATACTTTGTCAATAATAT TAGTAGTTCCTTTTATTATTTCAATTAATTAAGTCACGCCTGGGATATGCTAGCAAGGCACTTGGATGTTGTGTCGGTAA CATCTCCCGTACGAGGTGGGTTTGGTGTCTCTATGATGAGCATAGAGCACAAATATAATACACATCATTTTGTATAAGAA ATAATAGTATTAGTGGAGTACAAGGTTACTCTAACACATCATAATAAATATAATTAATATAATTAAATAAAATAGAAAGT TTGGGGATAATACACATCAGAATTGGAACATTTCACGAATAAAGGTGACACCATACCCATCAATCTGGCAAGTAAAGAGA TCACTGTTGGTAATAGTTAGAAATATGTTAAGAATCATATCTATAAAAAGACCTATATATTTATCATTATTTTCAAATGT TTTCTTAGTTTGTTAAAGATTGTCTGAGCTCTCTTGACCAATTAACAATCACATGAACTGTGAAAGAGTTATTGGACAAG TATTTTTCTTTTCAAATTTGGTTTTATCCTATAAATTATAAAAATGAACTGAATTTTTCTTTAGTTTTTTTTGTTGCTGT TGTAGGTACAATTTATAGAGTTTGATTTCTAAATTTCTATTAACTTTGTTGGTGATGAAATGGAACTGTAGGCCAGTGCT AGATCAGAACTTGTACAACATGGGTATGAAGATGACCTCAACAACATTTGCATCCGCCACTGTTAATGTCCTTCCAGCCA TTACTTTTATAATGGCACTCATTTTCAGGTAAAAGCAAGTTTCACTCACTTATCCACTACATCAAATGCTGTCCCAAACT ATTTTGTTCCTTAATTAGGCACACACTTTTGCAATATTCAAATTTAGAAAAAGCTTGATTGAACTTGTCCAAATACTATT GCCTAAGCAAATTGAGTTAAGAAACAAATATTTTCCAATAAGTGCACATTTAATCAGATTCTTTTCAAAATCTCTTTTAC TTACTGTTTTAGGTTTCTATTCTTCATTACTGTAGTGAATCTAATGTTATGGTAATTAATTGAATGATCAGGTTGGAGAC AGTGAATTTGAAAAAATTCCACAGCCTAGCCAAGGTCATTGGAACCTGTATCACAGTTTCAGGAGCTATGGTCATGACTC TGTACAAAGGCCCTGCCTATCAACTCATAAAGGGGGGAGGAGCGATCGGCCACCACGGTGGCAGCGGCAGCAATGACGAA CCTTCCGACCAGAACTGGGTGGCCGGTACAGTAATGCTCATATCAAGTTGTGGTAGTTGGGCTGGCTTCTTCATTTTGCA AGTAAGCATGTGTAGCCAACTAGTCATGCACCTAAACATACTTATTTTATTGGTTCATGAAGCAACTAATCCTTCTATAA ATGATACCAAAAATAAAATTGTGAATAGTTTGATCGTCAGAATTGATTATGAGAAAAAATAAATTGATGCATGAACTAAT AATCTGACTTGTGTTACTATTTTGTGGAGTACAGTCATTCACTTTAAAGAAGTACCCAGCAGAACTCTCACTCACAGCTT GGATTTGCTTAATGGGTATCATTGAGGGTTCAATTGCATCATTCATCTTTGAAAGAGACTTGAGTGTATGGGTCATAGGC TGGGACTCAAGGCTTCTTGCTTGTGTTTATTCTGTGAGTACCTTTCAATAGTTCATGATTAACTTTCCTTTTAATCTCAT TTCACTCAAAATTAAAACCATTAATCAATGATTTAACTAATTAACCAGGGGGTGATATGCTCTGGAATGGCTTACTATGT ACAAGGGATTGTGAGCAGGGAACGTGGACCAGTGTTTTTAACTTCTTTCAGCCCACTTTGTATGATTATCACTGCTGCAT TGGGTTCCCTTGTCTTAGCTGAACAAGTTCATCTTGGAAGGTATGCATCCTAAACTTTCATCAATCAAAAATCACTAGCA AACCAAAAAAACTAGACACATTGGTAAATTTATAGCATGTTCGGTTTCACGGTAAAATCTTCAAGAATCATCTCTGACTA CTACAAGTCTTAACTTCTGAATAAACGTTACTTGAATTCTGAGTGAAGCATAAAAACAAACATGTTATGCGCTAAAATTC TTGTGTGTTTTGCATTTCCAGTATATTTGGAGCTATCCTCATTGTGTGTGGGCTTTACACTGTGGTATGGGGCAAAAGCA AAGACAATAATCAGAACACAATAGATACAGGGAAAGTTGAAGGTCAAGAATTACCAATAAAGAATGGTACAAAATCAGCC TCAGACATTTTTGAAGGCATTGAGGTCAATGCCCCTGATGAGAAGTTGAAGATTGGAGCAAGATCATGATGAGGGTCCTA TGAATTTGGAATAGCATTATGAAATTTAAGATCCTAAAGCTAGCTAACTAGAGAGGTCAAGAAAGATTTTGTGCACTGTG AAAATCTTTCACCAAAACCTGCCTCAGTGGCTTCATTTTCACCTTTCCTTTTTGTTATGTTTAACTTTTTTCCGTGTTTG CGGAAGTATAATGTGGATCGTATAATGAAATAATGCTTTTGTCCCTGTTTTTGTCATGCAGTACTTCATTTTTATTTAAT TTTTACTAGTTGTGCTACTTAATGTAAAGATAAGTGCGAGTCAATTCGACTATGTCAATTGCAGTCATTAAAAGTGATTA TTAGAACTCATAAGTCAGGAGTTTTTTTTTTTTTTGATTGTGTGCCAGGAGTTTAATCTTTCGAAGTTACACCCGGGTCT GAATTGCAACAACAATTTACTACTCTAAAAAAATATAATTTTAAGTGCCTAAAC
CDS sequence (LotjaGi1g1v0258800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAGCAAAATGGTAGCAAAATGGGTTTTCTTCACAAGGTGAAGCCTTACCTTGCAATAGTGTCCCTTCAGTTTGG CTACTCTGGGATGTATGTCATCACCATGGTTTCTTTCAAACATGGCATGAGCCATTGGATACTCTCTGTGTACCGTCATG TAGTTGCCCTCATCATTATAGCTCCTTTTGCCTTTGTCCTTGAAAGAAAAATAAGGCCAAAGATGACTCTTCCCATCTTC CTCAGGATAGTGGCGCTTGGGTTCCTTGAGCCAGTGCTAGATCAGAACTTGTACAACATGGGTATGAAGATGACCTCAAC AACATTTGCATCCGCCACTGTTAATGTCCTTCCAGCCATTACTTTTATAATGGCACTCATTTTCAGGTTGGAGACAGTGA ATTTGAAAAAATTCCACAGCCTAGCCAAGGTCATTGGAACCTGTATCACAGTTTCAGGAGCTATGGTCATGACTCTGTAC AAAGGCCCTGCCTATCAACTCATAAAGGGGGGAGGAGCGATCGGCCACCACGGTGGCAGCGGCAGCAATGACGAACCTTC CGACCAGAACTGGGTGGCCGGTACAGTAATGCTCATATCAAGTTGTGGTAGTTGGGCTGGCTTCTTCATTTTGCAATCAT TCACTTTAAAGAAGTACCCAGCAGAACTCTCACTCACAGCTTGGATTTGCTTAATGGGTATCATTGAGGGTTCAATTGCA TCATTCATCTTTGAAAGAGACTTGAGTGTATGGGTCATAGGCTGGGACTCAAGGCTTCTTGCTTGTGTTTATTCTGGGGT GATATGCTCTGGAATGGCTTACTATGTACAAGGGATTGTGAGCAGGGAACGTGGACCAGTGTTTTTAACTTCTTTCAGCC CACTTTGTATGATTATCACTGCTGCATTGGGTTCCCTTGTCTTAGCTGAACAAGTTCATCTTGGAAGTATATTTGGAGCT ATCCTCATTGTGTGTGGGCTTTACACTGTGGTATGGGGCAAAAGCAAAGACAATAATCAGAACACAATAGATACAGGGAA AGTTGAAGGTCAAGAATTACCAATAAAGAATGGTACAAAATCAGCCTCAGACATTTTTGAAGGCATTGAGGTCAATGCCC CTGATGAGAAGTTGAAGATTGGAGCAAGATCATGA
Protein sequence (LotjaGi1g1v0258800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEQNGSKMGFLHKVKPYLAIVSLQFGYSGMYVITMVSFKHGMSHWILSVYRHVVALIIIAPFAFVLERKIRPKMTLPIF LRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFIMALIFRLETVNLKKFHSLAKVIGTCITVSGAMVMTLY KGPAYQLIKGGGAIGHHGGSGSNDEPSDQNWVAGTVMLISSCGSWAGFFILQSFTLKKYPAELSLTAWICLMGIIEGSIA SFIFERDLSVWVIGWDSRLLACVYSGVICSGMAYYVQGIVSRERGPVFLTSFSPLCMIITAALGSLVLAEQVHLGSIFGA ILIVCGLYTVVWGKSKDNNQNTIDTGKVEGQELPIKNGTKSASDIFEGIEVNAPDEKLKIGARS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| PANTHER | 9 | 349 | 341 | 1.0E-220 | ||
| PANTHER | 9 | 349 | 341 | 1.0E-220 | – | |
| TMHMM | 17 | 39 | 23 | - | – | |
| Phobius | 18 | 39 | 22 | - | – | |
| Pfam | 29 | 149 | 121 | 3.6E-11 | ||
| Phobius | 40 | 44 | 5 | - | – | |
| Phobius | 45 | 67 | 23 | - | – | |
| TMHMM | 49 | 67 | 19 | - | – | |
| SUPERFAMILY | 51 | 161 | 111 | 1.31E-7 | – | |
| Phobius | 68 | 78 | 11 | - | – | |
| Phobius | 79 | 97 | 19 | - | – | |
| TMHMM | 79 | 98 | 20 | - | – | |
| Phobius | 98 | 108 | 11 | - | – | |
| TMHMM | 108 | 130 | 23 | - | – | |
| Phobius | 109 | 128 | 20 | - | – | |
| Phobius | 129 | 139 | 11 | - | – | |
| TMHMM | 137 | 159 | 23 | - | – | |
| Phobius | 140 | 160 | 21 | - | – | |
| Phobius | 161 | 190 | 30 | - | – | |
| Phobius | 191 | 211 | 21 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Pfam | 194 | 331 | 138 | 1.4E-9 | ||
| Phobius | 212 | 222 | 11 | - | – | |
| TMHMM | 221 | 243 | 23 | - | – | |
| Phobius | 223 | 244 | 22 | - | – | |
| Phobius | 245 | 249 | 5 | - | – | |
| Phobius | 250 | 275 | 26 | - | – | |
| SUPERFAMILY | 255 | 336 | 82 | 7.32E-9 | – | |
| TMHMM | 258 | 280 | 23 | - | – | |
| Phobius | 276 | 286 | 11 | - | – | |
| Phobius | 287 | 308 | 22 | - | – | |
| TMHMM | 287 | 309 | 23 | - | – | |
| Phobius | 309 | 313 | 5 | - | – | |
| Phobius | 314 | 333 | 20 | - | – | |
| TMHMM | 314 | 333 | 20 | - | – | |
| Phobius | 334 | 384 | 51 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0258800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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