Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0259700 |
| Transcript ID | LotjaGi1g1v0259700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | EamA-like transporter family protein; TAIR: AT1G77610.1 EamA-like transporter family protein; Swiss-Prot: sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1; TrEMBL-Plants: tr|A0A0R0GUQ3|A0A0R0GUQ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0259700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:62960247..62967315) extracted from Lotus japonicus Gifu genome v1.2.
CTAGGATTTAGGAGGCTACGATATAGTATTGACCAAAATGTTGACTATACCTCGGAAGTCGATGGTGGTGTGAGGGACCC ACATTGATACAAGGTTAAGGTAGAAAGAAAGAAAGAAACACATGATTAATGATTTGCATTCCATTTCCATTTCCATGGCA TGAGTGAGAAAGAGAGAAGCAAATTGAAACGCTTTCGAAGAATTCAAACATAAAAACGAAAGAGCAAGAGAGAGAGAAGA GGGTGTGATGCAAATGACGTTGTGAGAGTAGAATACAATAGAATACAATACAAGAGGCACCTCATCGTTTTCCTCATTCG CATTCACCAGTCACCAGCGTTACTTGTTCATCTGAAATGGAAGAAAGCGTTGTTTTCAACTTGAGCGCTCTCAGATCTCT CTTGTGCATCCTTCAATGGTGGGCTTTCAATGTCACTGTCATCATCGTCAACAAATGGATCTTCCAGGTTCCTCTCAATT CTACTTTCAATCTTATCCTTCAATTCCACTTTCAAAAACAATCTCCAATTTTCAACTTGTTTTCCAATTCAGGATATTTC TTTTATTTCCTCATTTTCTCTTATTTTTAGCGTTGATGATACCTAAATAATTATATATTTTCTGGAATTTCATTAGACTC CATCGCTAGCATGCTAAAAAAAACAATAGAAAATCTGTCTAATTGGGCTTAAAAATAATATTAACAATAATTATTGTTAT TATTATTACAACATAAGTGTGTGTTTGGATCCGATTATTCTGCTTAAAGTATAGCTTATAATTAAATTGAGGTGTTTTAT TTTTCCAAAAAATAAATCAGAAACAGACACGTTATTAGTGTTGGTTGAGCTAGATCTGTTGCAATCACAAAATTGTGTTG TGATACTGATCTACCTACTCTTCCGTTACTTTTGCATGCATGTTAATGTTATAGATTTGCAATGCATAAAGTCTTTATGC TCTCTGATTTGATTTTTCTCGTTGGGCCAATTGTAAATTTAATTTCTAAACCCAGATAGATGACTCTGTTTAATAAGTGG TCCTGGAAGGTGGTATGGTATGTGATTAATTTGTAAACAAAGGATTCAATCTAAACAAAGGACCTAATTTATTCTGATCA CTAGATTGTATAGATCTTCTATGTTTTACTCCATCTATAATAAAGAGAAGGTTTATCAATCTTTACCACCTCTTCCACAA TCCGCATCTGCGGGTTTAGGACTCCTTCTGCATCGGCTGCTCAATCATTGAATTGAAAACGTGTATGAATTATAGAAAAA AGCTTTGAGTAATTTTTCCTTTTTGCAGAAATTGGATTTCAAGTTTCCCCTATCAGTGTCCTGTGTCCACTTTATCTGCT CATCCATTGGAGCGTATGTGGTAATTAAAGTGCTGAAAATTAAACCACTGATAACTGTTGACCCTGAGGACCGCTGGAAA AGAATCTTCCCAATGTCATTTGTGTTCTGTATTAACATAGTGCTGGGGAATGTGAGCCTTAGATACATTCCAGTGTCTTT TATGCAGACAATAAAGTCATTCACGCCTGCAACTACAGGTGAGGTTCATTAGTCAGTGTTAACATTTCTTCACATATATG CTACTTGCTTTGTACATTTTCATCTGATCTGGGTGAACTGGCACAGTGTTATTGCAGTGGCTAGTTTGGAGGAAAAGTTT TGACTCTCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTATGACAGAGCTTAGCTTTAATA TGTTTGGATTTTGTGCCGCCTTAGTTGGCTGTTTGGCTACATCTACAAAGACTATCCTGGCTGAATCTCTTCTGCACGGC TACAAATTTGACAGGTACTGACTTTATACTTGCATTTTTATATTCTTTGTAACTTCATATTTGGTGTTCTTCCAATCCTT TCTCCATTTTTCTGCCTGGGTTTCCCCTTTCTAGACTCTCAACTTCCTAGTTATTTCTGTATCTGTAGTGCGTACTCCTT TTTATGGACAATAGGTTTTAAGTTCCTGCATTGACATTATAAGTCCTTATTTTTATTGAATTATTCTCCAATGTTGAACT AGGAATGATTCCATATTGGAACTGAGACCATCTTTAGGCACTGCTAAGTTTGATTGCAGCAGGCCTGCAACTGTTATCAG TACCTATCACGCATTACAACCAAATGCATGTTAGCTTAAATTTGCTGAATTGTACCAAGAATAAGATGTGTCTTGTGAAT GGATGGTTTTTATTTTAAGGACATATAATGTCGAAGGTCTTCTATACAGTGATTATAAATTTCTAAATTGTAATTATTAA TGATCAATTATGTGTTATATCTATATGGTAATATAAAATAGAGTGCCTTTGTATTATGGATATGACACCATTGCATGTGC ATCTTAATCAGAACCAAAACGACGAGGAAGTAATTCATTTCTATGATTCTGTCTTGATGTTGCAGTCGGTTGTAAACCTG GTATCTTTTGAATAGACTAATGTGTATTAGAGTATACTCAACCATATTTATGAAAAGGCAAACTTGTGCAAAATAATGTT TTTTTTTATGCTGGCATTGGAGAATGACATTTATGATTCTGGATATATACATCAAAACGAATATCCTAGACCACTAATTG TAACCAGTACCACTAACCATTGTGGTGAAATGCTTGTGTTGCATTATGTAATATGCTTTGCTTGCGAGTTGTGACCTTTT CTTTTCTCCAAACTGACTGTAACCTGCGTAGATTTGTGCCTGGAATATTTCTTTTGATGTGTTAGCTTCAAACAAAAAAA AGGAGTTATCACTGGCTGGCTTACTGGTGATATTTAAATTTTTTGGGTACTTGAAAGTGCTGGAGGGTAGGCTTTGCCCC ATCCCAAGGTTCAGACATGCCTTGCCTTAAGCCTCTATATGGGCTTACAGAAGTACTTACATATGACCTGTTAATAAAAG TCCACCAACAGGAATTTCACCCAAGATTTTTTGTCGACTATGTTTGATCATCTTTCCTTGCATTTATCGTAGACTCTTGA CTATTCTAATATACTTTTTTCAGCTCCGAGCATTTGTTGGTTTCTCTGAATTACTTTGCCAAGATTTTTCTTCACTGTAC AAGCTAATTTTTCTTTTCATGTATATATGTAGCATAAACACAGTCTATTACATGGCACCTTTTGCAACTATGATCTTGGC ACTTCCTGCCTTATTACTTGAAGGCAATGGAGTTATTGAATGGCTAAACACTCATCCATATCCTTGGTCGGCCCTCACTA TTATTTTTAGCTCTGGGGTGTTGGCTTTCTGCCTTAACTTCTCCATTTTCTATGTGATTCACTCCACCACTGCTGTCACG TTTAATGTTGCCGGAAACCTTAAGGTGAGATCTATGAGGCATAATTTTCAAGCCACTTTATTAATTGGTTCAAATTCTCC GTGCTGGTTTGTTAATTGGTTCAATTTTTTTATTTTGAGAAACTGTCCATTTCTTCCTGTTTAATATCTGGAGAAGCTGT GGCCATGTTATTATCATTGGTATTGAGATGATGAAGGAACAGAGAAAAAATAGGAATCTGATTGCTCAATTATATTTACA AGGCTTGATTATCACATATACGTCATGTAGAAGTTAAGTAATACGACAAACTTGGTGACTAGCTAATAACTAACAAATTT GTAACTGACTTTCACCAAATTTACATTTATATATAGTATTCGCACTTGCTTTATTTGTTTCATTTTCTCTAACACCAGCT CCGTAGTGTCAAGATATCATATTGAGAAGAGATTATATTCCTTATAAAGGATAGAGAAATCATCACCTCTAAGCTAGCTT TTGGGTAGAGTTAGAACTAATCTGAATTGTAGGATGGTCCTAGAGCTATTTATTGGGTCACCCATAAATGGGTCATCCGC AGATATCCAATCCAGCCTTCTCCAAGCTTCAGATGTCCAACACTGTGTGTGAGGGGGAGTGTTAAGGTCTCACATTGACT AGATTTATCCCAATACATCCTTGTAAATGGTACAACAATTCTCACCTCTAAGCTAAATTTTGGGTCAGAGCTAAGCATAA CCCTAAGTCTAAAATTATGCTTCAACTTTGCATGTTAATCACTAAGTGCATCTTTGTTAATGGTAATCGTGATGGGCTGT GTTGATGGTGTAAAGCCAAACTACCTCTTAAATCACAGTTTTGTTTCCGTTTTCTAAATAACCAAAATCATATTTTTATG CAGGTTGCAGTTGCTGTCCTTGTTTCTTGGCTGATATTCAGGAACCCAATTTCATATTTAAATGCCGTTGGATGTGGTAT AACTCTTGTGGGATGTACATTCTATGGTTATGTCAGGCACATGCTCTCCCAACAACAACCAATTCCAGGAACTCCTAGAA CACCCAGAACTCCTCGCACCCCTGGGAGTAAGATGGAGCTGCTTCCTCTTGTAAATGATAAATTAGAAAACAAGGTCTAA TTGGTTTAGCTACATATGATATGAGGTTTCTGCCCATGGGAAGGCAGTGATAGCAATAGATACATAAAGATTAAATTTAC AATCATTTATTCTATTAGATTTTACCCCACAATTTTAATACAAGTCTCTTCCTTTGTCCATTTTCTTTAGCCCTTCATAT ATGTTAATTCTCTGTTTTCTAGAGTAAGTTGTTTTGTACTAGCCTTTTATCACAATCTCTGCTCACAGAAGTTTCATAAA GGTTTCCAAAGATGCACGAATTTGTTTTGTACCATTTGTGTTCTTGTTGGATTTGGGTTTAACTGCAGTTAGCAATACAT TAATGCATTCACGATCAAAATCGGACGACTCAGATTTGGAAGTCCGATTTGGCAACAGTGAATGTAGAGATTCACAAGTA CAGCGAGTCTATGCCATGCTTGTTAATAATGTGATTTTTCTTACTGCAAATGAATTGGACACATGCCTACCTAACAGTAA TTCTGGTAGATTGACCTTCAAGTCTGAAATTACCTGTTTCTAGTTCAACGCTTAACAGTAATTGAATGTCCACTAGTGTT TCAAATGCATGTGATTTACATAACAGACAGGTCGTTTTCTAGCCTTAAATCGATGCACGTTACCTTCTCCAATTTCTATG GTTCAATTACTATTGAAATGTGCTGGATTTAATGTTTACTAAAAATGGTTTTTTCTTGATTTTACTCCAACGATTGATCC ACACAGTGAATTGAAATATTGTTTATTCATATACTCAGATACCATGGTCTTAGAAAGACAACAGTGATTACATTAGTGGA AGTACGATATAGTTAGAACTAGTTACATGGTGAAATAGATTATAGATGACAACTCAAATATTAAGGTGAATTTCCCCCAT TTATCCCCCACCATTTTTCCCTTATGAGATCCTAACTAAGTAGAAGCAACTAAACTTCAAACTAATCTAAGCCAAAAGCC AGAAGTTCTTCTGCCACCTAGTGCTGATAAAGTAGCCATTGGTGCCTTGGCCTCTCTTCCTCACTCCAATTGTCAAGCAC TCTGCATTATTGATGCAATGCTCCACAAACTCCTCTGTGCTGCTGTTGCTGGTTCCACAAATACTGTAAAAAATAATGAC TAAATTACAAACACTGAATAATTTCTACTTCATATAATCTTATAGACCATGTTTGGATCAGCACCTTTTTTTCATCAGAA TCAATTTTAAGAAACTACTTACAAAAGTTTCTACCCGTAGTTAAGAATCAATTATAAAAGGGTTTTTAAAATACAGAAAT TCAGGGAAAGTATGATACTAAAGGTTGCAAATTGCAGGTGTGGTGTGTGGATAATAGAATTCTCACCAGCTTAACAGAGA AGATGGCTTCTTTTGGCCTAGTACCAGAACAGAGACCTCCAGCTTCTTCACCTGGCTCATCACTGTGGCCAGTTTCGGTC CTTGGATTACAAGTGGTTCCACTTCCACCTGTGTCAGACAATAACACTATCAGTATCCTTTTTTTTTGTAAGGGGGGAAC GGGGACAACAAAGGGAAAAATGTGAAAAGAAAAGCTGAAAAATCTTAACATTTCCAATTATTCCTCTCTGGAATATGTAA AATCAAAGATGGGACTAATGCATGCATCTCAGACCCTTTTGCCATAAAAAGGATAGAAAAGATGCAAAAGAATTAATGGT AGCAGAAAAATTAAAAAAAAAGAAACAGCATAGAAAATTAACAGAACTATTTGAATCAAGATCTACAAAGCATAGTGACC ACTCCTTAATGTTTGGATAATCTTTTTTTCTCTCAAAATCAATTCTGACACTCAGAAGCTACTTAGATTAGCTATTCCCT AAAATTGAATTGGTTGTAGAATCAATTCAATTCACCAAACATGCTAAACAACTTACCTCAGGCTTGCAATCTTTGCAAAG GGATTCAAAATAATTGAGAAGATAATTGGAGCAAGAAGAAGATTCATAGCCTATGTGAAGCAGAGTCAACAAGTCACCCT TGTTAACAACATGGGTGAGTGCCCACAACATAGCATGCTTGGAATGTGAAGAGCCATCAACAACAACCATGACTCTCTTC CTCACCACCACCCCAGTACAGTCCTCACTCCCATACTGCATGTTAAACCCTTCCATCTGACTCAGACTTGCCTCACAACC ACTGCTGCTATATCTGCTCTTCTTTGCACTCCACCTGTTAGATGTGGATTTCCAAGCTTCCTTTGAACTAAGCTCACTCA AAAATGAAGCTGAAGTGGGCATTGTTTTGTTCTTATTATGCTTGATGATGATTTATGCAGCTCCAAGTGTCCTGATGATG TGTGTACTATTTACTAGCTGAAGTGTAGGTGCTAGCTAGCTAGAGTGTAGCAGTGGTTTTGTGTGGCAGATTAGGAAAAC AGAACCTGCTAGCTGAGTGTGTGTGTGTGTGTGTGAGAGAGAGAGTGAGAGAGTAGAGAGAGAGAGTGATGAAGGGAGGG TTACGTGATGCAAATTGCAAAGTGTGGGGGGTTTAATAAAGTGTCACGGGGATCTGACGTCTGTTTTATGGTTCATGATG CTAAATAGGAGATCTATGTGAAATCTTTT
CDS sequence (LotjaGi1g1v0259700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAAGCGTTGTTTTCAACTTGAGCGCTCTCAGATCTCTCTTGTGCATCCTTCAATGGTGGGCTTTCAATGTCAC TGTCATCATCGTCAACAAATGGATCTTCCAGAAATTGGATTTCAAGTTTCCCCTATCAGTGTCCTGTGTCCACTTTATCT GCTCATCCATTGGAGCGTATGTGGTAATTAAAGTGCTGAAAATTAAACCACTGATAACTGTTGACCCTGAGGACCGCTGG AAAAGAATCTTCCCAATGTCATTTGTGTTCTGTATTAACATAGTGCTGGGGAATGTGAGCCTTAGATACATTCCAGTGTC TTTTATGCAGACAATAAAGTCATTCACGCCTGCAACTACAGTGTTATTGCAGTGGCTAGTTTGGAGGAAAAGTTTTGACT CTCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTATGACAGAGCTTAGCTTTAATATGTTT GGATTTTGTGCCGCCTTAGTTGGCTGTTTGGCTACATCTACAAAGACTATCCTGGCTGAATCTCTTCTGCACGGCTACAA ATTTGACAGCATAAACACAGTCTATTACATGGCACCTTTTGCAACTATGATCTTGGCACTTCCTGCCTTATTACTTGAAG GCAATGGAGTTATTGAATGGCTAAACACTCATCCATATCCTTGGTCGGCCCTCACTATTATTTTTAGCTCTGGGGTGTTG GCTTTCTGCCTTAACTTCTCCATTTTCTATGTGATTCACTCCACCACTGCTGTCACGTTTAATGTTGCCGGAAACCTTAA GGTTGCAGTTGCTGTCCTTGTTTCTTGGCTGATATTCAGGAACCCAATTTCATATTTAAATGCCGTTGGATGTGGTATAA CTCTTGTGGGATGTACATTCTATGGTTATGTCAGGCACATGCTCTCCCAACAACAACCAATTCCAGGAACTCCTAGAACA CCCAGAACTCCTCGCACCCCTGGGAGTAAGATGGAGCTGCTTCCTCTTGTAAATGATAAATTAGAAAACAAGGTCTAA
Protein sequence (LotjaGi1g1v0259700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEESVVFNLSALRSLLCILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSSIGAYVVIKVLKIKPLITVDPEDRW KRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVLLQWLVWRKSFDSRIWASLIPIVGGILLTSMTELSFNMF GFCAALVGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPALLLEGNGVIEWLNTHPYPWSALTIIFSSGVL AFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNAVGCGITLVGCTFYGYVRHMLSQQQPIPGTPRT PRTPRTPGSKMELLPLVNDKLENKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 4 | 343 | 340 | 1.9E-212 | – | |
| PANTHER | 4 | 343 | 340 | 1.9E-212 | – | |
| TMHMM | 10 | 32 | 23 | - | – | |
| Phobius | 12 | 31 | 20 | - | – | |
| Pfam | 15 | 301 | 287 | 2.1E-52 | ||
| Phobius | 32 | 42 | 11 | - | – | |
| Phobius | 43 | 63 | 21 | - | – | |
| TMHMM | 44 | 63 | 20 | - | – | |
| Phobius | 64 | 82 | 19 | - | – | |
| SUPERFAMILY | 72 | 153 | 82 | 4.05E-9 | – | |
| Phobius | 83 | 104 | 22 | - | – | |
| TMHMM | 83 | 105 | 23 | - | – | |
| Phobius | 105 | 135 | 31 | - | – | |
| TMHMM | 136 | 153 | 18 | - | – | |
| Phobius | 136 | 153 | 18 | - | – | |
| Phobius | 154 | 158 | 5 | - | – | |
| TMHMM | 157 | 179 | 23 | - | – | |
| Phobius | 159 | 182 | 24 | - | – | |
| Phobius | 183 | 193 | 11 | - | – | |
| TMHMM | 191 | 213 | 23 | - | – | |
| Phobius | 194 | 211 | 18 | - | – | |
| Phobius | 212 | 230 | 19 | - | – | |
| SUPERFAMILY | 220 | 300 | 81 | 5.75E-5 | – | |
| TMHMM | 228 | 250 | 23 | - | – | |
| Phobius | 231 | 251 | 21 | - | – | |
| Phobius | 252 | 257 | 6 | - | – | |
| TMHMM | 257 | 279 | 23 | - | – | |
| Phobius | 258 | 279 | 22 | - | – | |
| Phobius | 280 | 284 | 5 | - | – | |
| TMHMM | 283 | 304 | 22 | - | – | |
| Phobius | 285 | 304 | 20 | - | – | |
| Phobius | 305 | 345 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0259700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…