Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0262200 |
| Transcript ID | LotjaGi1g1v0262200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Two-component response regulator; TAIR: AT3G57040.1 response regulator 9; Swiss-Prot: sp|O80366|ARR9_ARATH Two-component response regulator ARR9; TrEMBL-Plants: tr|I3STU9|I3STU9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0262200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:64195612..64200007) extracted from Lotus japonicus Gifu genome v1.2.
TGGACATCTCATTTTTATGAGACAATCAATTCCATTAGTGAGCATTCAAAATCGCTAATTAAGATATGGGTGATGCCCAA TAGTGTTTAATATTGTTTGGCGTTCACTGTTTTCCCTCATGCACCCACTAATAGAAAAAACTACAGGATAATTACATTCC ACCTCTCCTTCCCATTCTCATTCAACACGTTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTGTGA CACTGAACTACATATTTCTATATATTGTAATAACCAGTCATATAGATATTGCAAGATATATAACATATTTAGATCAACAA GAGTGTTCTTCAACCCTGACATGGAGTTTGTGGGTACGAGAAAACTACAACAAAATCCGCAACTGCAACTCCAACAACAG CATTTTCATGTATTGGCAGTGGACGACAGTGTCATTGATAGGAAGCTTTTGGAGAGGCTCCTTAGAGGCTCTTCATGCAA AGGTTAATTTATAGCTTATACCATTTAATTTGTTTTCTTCTTCTTCTCAAGATTTTAATTCAATCCGTACAATCTCAATT CTGAGGTTCAGGTTCAGTGAATATTTGAAAATTCTTCTATATATAATTATTTTTTAGTCAGAATCAGTTCGGAAGAGAAG CTTATATATGAAGTAGCTACTAGATTTCTGAACTGACTCTGATTAAGAGAAGCTGAGAGAAACACCCTATTCATTTTGTG CTGTCAATTTGAAGATATATGGTTAATTGTGTTTGATTTGTTAAGCAGTTACCTGTGTGGACTCTGGAGATAAGGCTTTG AAATATCTTGGTCTGATTGATGACCTTGATAATACTTCTTCAGCTTCTTTAGAATCACCAATTTCTCCTCAACAAGTTGA ACAAGAGGTAATTAACATCTTCCCCTTCTTTGTTTTTCTTTTCCTCAATCCTTTCAAGATAATTGAGCTAGTCATGTACT GCATTTGAACCAAGCTATTATTTGGAGTTGTATAGCTTCTCTTTTATGTTTCCGTACATCAAAATTGTTATGACAAAGAG AAGAGCTCAATTTTCTTATATAGCAAATTATCATCTTCAAAACAAGAGATCAATTGTTTATGAAATTGAATAGCATCCAT TTCATCAATCTTTGGTACATCATTATTTCTTTTATTTTGTTCCATTTTTCTCTTCTGCATTTCTTTTTGTTATATTTTCT TTTTCAAGTACACGTGATGTATAGACACGTACTAAAAATTAAAGAGTAAAAAGATGGGGGTTCAGGAATATCTTTCTTTT AAAGACCTTCAACAAGATGCATATATAGTAACTCTCTGACATGTTGGTTGTGTAAACAACATGGAATTGCTGCGGAATTG CGTAAGTCCTCTAAAGTGACTTTCTAAGTTCCCCATTTATCAGCCAGCAATGGCAAAATTTTACAGTGGACCATATTAGA AAATTGTCGATCAATAAATCATATTTTTACACACTACATGTTATTCATAATATGCTTTTAATAACTTAAAATTAATTTGC AAAGAAATTTCTTTAACTTGTGAACCATGCTTTGATCTACCGATAGACAAAGTGAGGTAATATCGGTCTTACAAAACTTA TTATTATTTCAAGAGTGAAAACTTTTTCATGGCACTGTACATACTCCTAATATAGTAATTTTGATCCATCATCCCCAAGC TAGACTTGTCTCTAATCTTGTCTTCTATTTTCTTCAAACATCTCTTTTGTAAAAAGAGTAGTTTTTTTTTTAATAAGCAA AATTGATATAAAGGAAAGGTTAGAGCAAATATTCAACATTCAATATGTGATTTAATTTGCTAGTTCATGGTGGGAGGTCA TTAATTTGTTCCTCCTTCTAGTTCTAGCTACCACTGTATATGTAGTTATAGTGGGGTGAGATAATATAAAATAATACTAT ATAAATAGTAACATGCACTTTTTGTTGAATCTTTTGAACTGCAGGGAATCAAAGTGAATTTGATCATGACAGATTTCTGC ATGCCAGGGATGAGTGGCTATGATTTGCTTAAACGAGTCAAGGTCAAAAACACAAACTCTTTTCTCCCCAACATCTTCCC GAAATTCCCTCTGTCTTTTTTTGGCTTGAATAGTATGCACACTCAACTCACTGAAAAAGATGCCAAAAAAACATCCCTTC TCCTTCAATCACGGTTTGGATACACAATGAAAAACCACAATAAATGTGATCATGATTAACAGTCACATAAGTTAAGAGAA ATTGGTTTTTTCTATCGTAACTTTGACCGTGTTATCTAACTATGTATCCAAAACATGCACTATCATGTTTAGAATACTTG ATTCTAAAACTAAAACCAATTTTAAAGATAAGCTTCTATGCAGATACAGTTTCTGACAGAAAACTATTGCTTTAAGCTAG TCTAAAAGTGCTGTTCACTTTCAGAATGCAAAGAACCAGTTAATGGTTTTGCTTTTTTCCAGCATTGTAGCTTTAATTTT TGACCAGTAGTGCTGTAATTTTCATTAGAAAGAAAGAGTGAGGAAAAAGGGAAAAGTTTTCAGATACAGGATCCAAGTTT GCTCTTTTGCTTTTGCTTTGCTACTATATATTTATTAATCCTTTTTTGTTTTTCCATTCTTTTCTTCTTTTGACAATGCT TACTACTTCAGGGATCTTCTTGGAAAGATGTTCCTGTCGTGGTAATGTCATCAGAAAATGTACCTTCCAGAATCAGCATG TAAGTTTTTTTTCTTTCATTCCTGTGCAAAATGTTCAGTTTTGTTTTCTTTCCTCTCTTTTAAGAAGACCCTATTGCTAT TTTGTTAATTAAGCATATGAACTAATTAAGTTAATGACTCATATTACTAGGTGCTTGGAAGAAGGGGCAGAGAAGTTTCT ATTGAAGCCTTTGCAATTGTCAGATTTGGAGAAGCTTCAGCCATACTTTCCCAAATCCCTTGATGAGTCTTGTGATGATG ATATATCTGCTAACAGTTCCATAGGTTCTGACATTGACAAGCTCATCAACAACAACAATAACAGTAACAATAATAGTTTA ATTACTAAAAGAAAGGCCATGTCTCCTACCCCTCCTGAGAGATCAAGACCCAAAATGAAAGGGTTGGCGGTGGTGTAAAA AGAGAAGGCTATAGAGAGTGATTGATGCATGCATATTATTTAGGTTATGATTGTGCTCCCTTCTAATTATGGTTTTCCCT CAACTCTAAAAGCTTAATGAATTACCAGTGAGTGCTAATTATTTATTCACACCTGTATATATATATGTATCGCTCAACAC TTACACATGCTGCATGCCAATTAATTTCCAACTTAAAGGGACACTTTGCGAAGCTACCAACTTCAACTCTCGTGGTATAT ACTCTGACACAATTGTAAATAGTATAAAGTTTAACATAATTTTTTTCTTATGGGCTGGCTAGAATGAAAGTTCAATAAAA TTACAATCTAACTTGTATTGTATCGAAACGCAATTTTTACTATCAGAGGTAGGTGTTTGTGAATTTTCTCTTTCCCATGG CCATGAAACTTGGGGTGACAAAATGGACATTAAGGCTGCATGTTCGTTGAATGATGTTAATTGGCTCCAAGCAGGACTTC TGAAATCATTAGGCAGAGGGGATGCCACTCACTTCTGGTCTGAGAATTGGGTTGGTTCAGGTATGCTTCGGTCGCGGTTC TCTCGGTTGCATAATTTGTCGCAACAAAAATACGAGCTGATTTGCAATATGGGGGATTGGAGCAGCGGCACCTGGTCTTG GAACTTTCGCTGGAGAAGGCCATTACGAGGACGAGAATTATCTTGGTTATCAGATCTGCAGGGGATTATCAATGGTATCT CCTTGAGGCAAGGAAGTGGTGACCGTTGGAGCTAGTGTTATTCGAAGGACGGGGTGTACTCGGTTAACACTGCATATTCT GTTTTGCAGGATCACAACTCTTTAGAGAAGCAAACCACTTGTTCTCTTGTTTGGTCTGCTGCATCACCTTCAAATATCAG GGCATTTACATGGAGAGTCTGTTAGAACAGCAACACGAATACAGATCAGAGTAGAGAGAAACACACAAAGCTTTGTTCAC GCAGTTCGGTCAAATTGCCTACCTCTGCGACTATAGAGCAGCTATAGTTCCGTTTATTGATTCGAACCTGAATACAATCA CTCAGCAATTGCAATTTCTCTCAATTGCACTAGTGCCTCTTGTGTCTCTTGTGTTTTAGAGTTACATTGTTATCCTATTT ATAGTGGATTCTATTTTACAATAAATTCCTAATAAGTCCTTTAACAATCCCTTAAAACCTTTTACAATCCCCATTAAATC AAATCCTAATAAACTAAAGATTTTAGCCCAAAATATAATGAGCCAAATCTCAACAATCTCCACCTTGGCGAATTCC
CDS sequence (LotjaGi1g1v0262200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTTGTGGGTACGAGAAAACTACAACAAAATCCGCAACTGCAACTCCAACAACAGCATTTTCATGTATTGGCAGT GGACGACAGTGTCATTGATAGGAAGCTTTTGGAGAGGCTCCTTAGAGGCTCTTCATGCAAAGTTACCTGTGTGGACTCTG GAGATAAGGCTTTGAAATATCTTGGTCTGATTGATGACCTTGATAATACTTCTTCAGCTTCTTTAGAATCACCAATTTCT CCTCAACAAGTTGAACAAGAGGGAATCAAAGTGAATTTGATCATGACAGATTTCTGCATGCCAGGGATGAGTGGCTATGA TTTGCTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCTGTCGTGGTAATGTCATCAGAAAATGTACCTTCCAGAA TCAGCATGTGCTTGGAAGAAGGGGCAGAGAAGTTTCTATTGAAGCCTTTGCAATTGTCAGATTTGGAGAAGCTTCAGCCA TACTTTCCCAAATCCCTTGATGAGTCTTGTGATGATGATATATCTGCTAACAGTTCCATAGGTTCTGACATTGACAAGCT CATCAACAACAACAATAACAGTAACAATAATAGTTTAATTACTAAAAGAAAGGCCATGTCTCCTACCCCTCCTGAGAGAT CAAGACCCAAAATGAAAGGGTTGGCGGTGGTGTAA
Protein sequence (LotjaGi1g1v0262200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFVGTRKLQQNPQLQLQQQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPIS PQQVEQEGIKVNLIMTDFCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRISMCLEEGAEKFLLKPLQLSDLEKLQP YFPKSLDESCDDDISANSSIGSDIDKLINNNNNSNNNSLITKRKAMSPTPPERSRPKMKGLAVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 224 | 213 | 2.4E-99 | – | |
| PANTHER | 12 | 224 | 213 | 2.4E-99 | – | |
| Gene3D | 17 | 162 | 146 | 2.0E-27 | – | |
| SMART | 22 | 159 | 138 | 5.2E-13 | ||
| SUPERFAMILY | 22 | 156 | 135 | 4.66E-25 | ||
| ProSiteProfiles | 23 | 163 | 141 | 29.556 | ||
| Pfam | 24 | 157 | 134 | 1.0E-16 | ||
| CDD | 25 | 155 | 131 | 1.77519E-21 | ||
| MobiDBLite | 187 | 224 | 38 | - | – | |
| MobiDBLite | 187 | 204 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
Expression pattern of LotjaGi1g1v0262200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…