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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0262200 |
| Transcript ID | LotjaGi1g1v0262200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Two-component response regulator; TAIR: AT3G57040.1 response regulator 9; Swiss-Prot: sp|O80366|ARR9_ARATH Two-component response regulator ARR9; TrEMBL-Plants: tr|I3STU9|I3STU9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0262200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:64195813..64199936) extracted from Lotus japonicus Gifu genome v1.2.
GATGCCCAATAGTGTTTAATATTGTTTGGCGTTCACTGTTTTCCCTCATGCACCCACTAATAGAAAAAACTACAGGATAA TTACATTCCACCTCTCCTTCCCATTCTCATTCAACACGTTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCGTTGTGACACTGAACTACATATTTCTATATATTGTAATAACCAGTCATATAGATATTGCAAGATATATAACATATTTA GATCAACAAGAGTGTTCTTCAACCCTGACATGGAGTTTGTGGGTACGAGAAAACTACAACAAAATCCGCAACTGCAACTC CAACAACAGCATTTTCATGTATTGGCAGTGGACGACAGTGTCATTGATAGGAAGCTTTTGGAGAGGCTCCTTAGAGGCTC TTCATGCAAAGGTTAATTTATAGCTTATACCATTTAATTTGTTTTCTTCTTCTTCTCAAGATTTTAATTCAATCCGTACA ATCTCAATTCTGAGGTTCAGGTTCAGTGAATATTTGAAAATTCTTCTATATATAATTATTTTTTAGTCAGAATCAGTTCG GAAGAGAAGCTTATATATGAAGTAGCTACTAGATTTCTGAACTGACTCTGATTAAGAGAAGCTGAGAGAAACACCCTATT CATTTTGTGCTGTCAATTTGAAGATATATGGTTAATTGTGTTTGATTTGTTAAGCAGTTACCTGTGTGGACTCTGGAGAT AAGGCTTTGAAATATCTTGGTCTGATTGATGACCTTGATAATACTTCTTCAGCTTCTTTAGAATCACCAATTTCTCCTCA ACAAGTTGAACAAGAGGTAATTAACATCTTCCCCTTCTTTGTTTTTCTTTTCCTCAATCCTTTCAAGATAATTGAGCTAG TCATGTACTGCATTTGAACCAAGCTATTATTTGGAGTTGTATAGCTTCTCTTTTATGTTTCCGTACATCAAAATTGTTAT GACAAAGAGAAGAGCTCAATTTTCTTATATAGCAAATTATCATCTTCAAAACAAGAGATCAATTGTTTATGAAATTGAAT AGCATCCATTTCATCAATCTTTGGTACATCATTATTTCTTTTATTTTGTTCCATTTTTCTCTTCTGCATTTCTTTTTGTT ATATTTTCTTTTTCAAGTACACGTGATGTATAGACACGTACTAAAAATTAAAGAGTAAAAAGATGGGGGTTCAGGAATAT CTTTCTTTTAAAGACCTTCAACAAGATGCATATATAGTAACTCTCTGACATGTTGGTTGTGTAAACAACATGGAATTGCT GCGGAATTGCGTAAGTCCTCTAAAGTGACTTTCTAAGTTCCCCATTTATCAGCCAGCAATGGCAAAATTTTACAGTGGAC CATATTAGAAAATTGTCGATCAATAAATCATATTTTTACACACTACATGTTATTCATAATATGCTTTTAATAACTTAAAA TTAATTTGCAAAGAAATTTCTTTAACTTGTGAACCATGCTTTGATCTACCGATAGACAAAGTGAGGTAATATCGGTCTTA CAAAACTTATTATTATTTCAAGAGTGAAAACTTTTTCATGGCACTGTACATACTCCTAATATAGTAATTTTGATCCATCA TCCCCAAGCTAGACTTGTCTCTAATCTTGTCTTCTATTTTCTTCAAACATCTCTTTTGTAAAAAGAGTAGTTTTTTTTTT AATAAGCAAAATTGATATAAAGGAAAGGTTAGAGCAAATATTCAACATTCAATATGTGATTTAATTTGCTAGTTCATGGT GGGAGGTCATTAATTTGTTCCTCCTTCTAGTTCTAGCTACCACTGTATATGTAGTTATAGTGGGGTGAGATAATATAAAA TAATACTATATAAATAGTAACATGCACTTTTTGTTGAATCTTTTGAACTGCAGGGAATCAAAGTGAATTTGATCATGACA GATTTCTGCATGCCAGGGATGAGTGGCTATGATTTGCTTAAACGAGTCAAGGTCAAAAACACAAACTCTTTTCTCCCCAA CATCTTCCCGAAATTCCCTCTGTCTTTTTTTGGCTTGAATAGTATGCACACTCAACTCACTGAAAAAGATGCCAAAAAAA CATCCCTTCTCCTTCAATCACGGTTTGGATACACAATGAAAAACCACAATAAATGTGATCATGATTAACAGTCACATAAG TTAAGAGAAATTGGTTTTTTCTATCGTAACTTTGACCGTGTTATCTAACTATGTATCCAAAACATGCACTATCATGTTTA GAATACTTGATTCTAAAACTAAAACCAATTTTAAAGATAAGCTTCTATGCAGATACAGTTTCTGACAGAAAACTATTGCT TTAAGCTAGTCTAAAAGTGCTGTTCACTTTCAGAATGCAAAGAACCAGTTAATGGTTTTGCTTTTTTCCAGCATTGTAGC TTTAATTTTTGACCAGTAGTGCTGTAATTTTCATTAGAAAGAAAGAGTGAGGAAAAAGGGAAAAGTTTTCAGATACAGGA TCCAAGTTTGCTCTTTTGCTTTTGCTTTGCTACTATATATTTATTAATCCTTTTTTGTTTTTCCATTCTTTTCTTCTTTT GACAATGCTTACTACTTCAGGGATCTTCTTGGAAAGATGTTCCTGTCGTGGTAATGTCATCAGAAAATGTACCTTCCAGA ATCAGCATGTAAGTTTTTTTTCTTTCATTCCTGTGCAAAATGTTCAGTTTTGTTTTCTTTCCTCTCTTTTAAGAAGACCC TATTGCTATTTTGTTAATTAAGCATATGAACTAATTAAGTTAATGACTCATATTACTAGGTGCTTGGAAGAAGGGGCAGA GAAGTTTCTATTGAAGCCTTTGCAATTGTCAGATTTGGAGAAGCTTCAGCCATACTTTCCCAAATCCCTTGATGAGTCTT GTGATGATGATATATCTGCTAACAGTTCCATAGGTTCTGACATTGACAAGCTCATCAACAACAACAATAACAGTAACAAT AATAGTTTAATTACTAAAAGAAAGGCCATGTCTCCTACCCCTCCTGAGAGATCAAGACCCAAAATGAAAGGGTTGGCGGT GGTGTAAAAAGAGAAGGCTATAGAGAGTGATTGATGCATGCATATTATTTAGGTTATGATTGTGCTCCCTTCTAATTATG GTTTTCCCTCAACTCTAAAAGCTTAATGAATTACCAGTGAGTGCTAATTATTTATTCACACCTGTATATATATATGTATC GCTCAACACTTACACATGCTGCATGCCAATTAATTTCCAACTTAAAGGGACACTTTGCGAAGCTACCAACTTCAACTCTC GTGGTATATACTCTGACACAATTGTAAATAGTATAAAGTTTAACATAATTTTTTTCTTATGGGCTGGCTAGAATGAAAGT TCAATAAAATTACAATCTAACTTGTATTGTATCGAAACGCAATTTTTACTATCAGAGGTAGGTGTTTGTGAATTTTCTCT TTCCCATGGCCATGAAACTTGGGGTGACAAAATGGACATTAAGGCTGCATGTTCGTTGAATGATGTTAATTGGCTCCAAG CAGGACTTCTGAAATCATTAGGCAGAGGGGATGCCACTCACTTCTGGTCTGAGAATTGGGTTGGTTCAGGTATGCTTCGG TCGCGGTTCTCTCGGTTGCATAATTTGTCGCAACAAAAATACGAGCTGATTTGCAATATGGGGGATTGGAGCAGCGGCAC CTGGTCTTGGAACTTTCGCTGGAGAAGGCCATTACGAGGACGAGAATTATCTTGGTTATCAGATCTGCAGGGGATTATCA ATGGTATCTCCTTGAGGCAAGGAAGTGGTGACCGTTGGAGCTAGTGTTATTCGAAGGACGGGGTGTACTCGGTTAACACT GCATATTCTGTTTTGCAGGATCACAACTCTTTAGAGAAGCAAACCACTTGTTCTCTTGTTTGGTCTGCTGCATCACCTTC AAATATCAGGGCATTTACATGGAGAGTCTGTTAGAACAGCAACACGAATACAGATCAGAGTAGAGAGAAACACACAAAGC TTTGTTCACGCAGTTCGGTCAAATTGCCTACCTCTGCGACTATAGAGCAGCTATAGTTCCGTTTATTGATTCGAACCTGA ATACAATCACTCAGCAATTGCAATTTCTCTCAATTGCACTAGTG
CDS sequence (LotjaGi1g1v0262200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTTGTGGGTACGAGAAAACTACAACAAAATCCGCAACTGCAACTCCAACAACAGCATTTTCATGTATTGGCAGT GGACGACAGTGTCATTGATAGGAAGCTTTTGGAGAGGCTCCTTAGAGGCTCTTCATGCAAAGTTACCTGTGTGGACTCTG GAGATAAGGCTTTGAAATATCTTGGTCTGATTGATGACCTTGATAATACTTCTTCAGCTTCTTTAGAATCACCAATTTCT CCTCAACAAGTTGAACAAGAGGGAATCAAAGTGAATTTGATCATGACAGATTTCTGCATGCCAGGGATGAGTGGCTATGA TTTGCTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCTGTCGTGGTAATGTCATCAGAAAATGTACCTTCCAGAA TCAGCATGTGCTTGGAAGAAGGGGCAGAGAAGTTTCTATTGAAGCCTTTGCAATTGTCAGATTTGGAGAAGCTTCAGCCA TACTTTCCCAAATCCCTTGATGAGTCTTGTGATGATGATATATCTGCTAACAGTTCCATAGGTTCTGACATTGACAAGCT CATCAACAACAACAATAACAGTAACAATAATAGTTTAATTACTAAAAGAAAGGCCATGTCTCCTACCCCTCCTGAGAGAT CAAGACCCAAAATGAAAGGGTTGGCGGTGGTGTAA
Protein sequence (LotjaGi1g1v0262200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFVGTRKLQQNPQLQLQQQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPIS PQQVEQEGIKVNLIMTDFCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRISMCLEEGAEKFLLKPLQLSDLEKLQP YFPKSLDESCDDDISANSSIGSDIDKLINNNNNSNNNSLITKRKAMSPTPPERSRPKMKGLAVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 224 | 213 | 2.4E-99 | – | |
| PANTHER | 12 | 224 | 213 | 2.4E-99 | – | |
| Gene3D | 17 | 162 | 146 | 2.0E-27 | – | |
| SMART | 22 | 159 | 138 | 5.2E-13 | ||
| SUPERFAMILY | 22 | 156 | 135 | 4.66E-25 | ||
| ProSiteProfiles | 23 | 163 | 141 | 29.556 | ||
| Pfam | 24 | 157 | 134 | 1.0E-16 | ||
| CDD | 25 | 155 | 131 | 1.77519E-21 | ||
| MobiDBLite | 187 | 224 | 38 | - | – | |
| MobiDBLite | 187 | 204 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
Expression pattern of LotjaGi1g1v0262200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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