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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0267700 |
| Transcript ID | LotjaGi1g1v0267700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transposon protein, putative, Mutator sub-class; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|Q9SSQ4|FRS6_ARATH Protein FAR1-RELATED SEQUENCE 6; TrEMBL-Plants: tr|A0A1B5Z7A3|A0A1B5Z7A3_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0267700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:65393227..65399738) extracted from Lotus japonicus Gifu genome v1.2.
AAAGGGAGTGGTGCAACTTTGCACCACTTTTTAGTGGTCCATAATAAATTATTCCAGGGTTGTGAGTGTAATCTTGAATT TAATTTTAATTTAATTTTATTTGGTGAAATATATGTGAATCCATATATGTCCATGCATACCCGTGGATATCTATGGATCT TTAAAATCCACTTAATGGTTATCAATGTGGGTATGAGACAGATACATGTACATGTTTTTACCCGCGAAGCGGGTGGTGGA TATATACTACACATGCTCACTCGTACCCATTGAAATCCATACTATGGGCCCAATAGTACAACACATGGAGACTTTATTCT TCATTTTCCGGATGAATGGTAAGTTTGGTACCTTAAGTTGTCTCTCGTTCTTTAGTTGGTAACCAAACTTACGAAATGGC CCCCATGGGCCCAATGTGGGCAAAACACCAAAATTTCTAGTTGAGCTACAAAATCAATTGATAAATATCTGAACAGAGTT ATATTTATCTCATACTTCTTCATCATCCTTCTTCTTCATCTTCATCTTCATCTTCATCTTCATCTGGCTCACTATCATCA TCAACATCGTCTTCTTCAGAATCAATACATCAGACTTGGAACAAAAAATCAATAATCTATCATCTTCATCCTCTAGTTCT TCTTCAATCTAGAACCTGATAAGTGTCATTTTTACATATATTAGTATATCATTTTAGACTCTTATTTGACATATATGCTT GATTTATTCATCATTTTAACCCTCAAAGTAATTACTTTAGTAAATACTTAGTTATAGCCTAGAAATAGTGCAAATGTTAT TTATTTCATGTGTTTAACTTGGACTTTTGATATAGGGTCATGAAAATCCAAGTTTAAAGTAAAAATTGCATTTTTAGAGA GGTTAAGTGCTGAGCACCAATCTGACATGCTAAGCGCCCCAAGGTTGCTGGAAAACCCTGTGTTGAAGGAAAGTGTGGCG CTGAGCGAAATTCAGGGGGCGCTGAGGGGAATTTAGGGGGCGCTAAGCGCCTGTGGCCGCCTGAAACACCTATAAAATGT CATAAATCATATTTTAGAAGTATATTTCCATATTTCTTCGAATTTTATCCCCAAAACAGAGCATAGGGAGTTGAGCACGG CTTTGGAGGATCCCTACGCCTAGGATTGATGGAGTGGAGCTCTAGAGCGTGGCAACAACTCTGAGAGGATCGTGACAACC TCTCGTCACCGTTCCTCTGGGTTTCATCTCTTCTTACCCTATGCCTTGTATATGTTCTTTAAAAATCGGCTCAAAACTCA AAAATCAGCCCCAAACTAAAAAATCGGCTCAAAAGTAAAAATCAACCCTAAACCCAAAAATCAGTCTCCAAAACCGTAAA ATCGGCTAAAAACTCAAAAGTCGACCCCAAACCCTAAAATCGGCTCAAAACTCAAAAATTAACCCCAAACCCAAAAATCA GCTAAAAACTAAAAAATCGGTTCAAAAGTAAAAAATGGACCCTAAACTCAAAAATCGACCCCAAAACTAAAAAATTGACC CTAATCCAGAAACCGATCCCTAAAATTTTAAACACTAACGTTTTTAACGAGTGAAGCTTTTGAAATGATTTAAGTAGGAA TGGAAGTGGGTTAGGTTGCCTACATGGACTCATGATATATTCTATATTAGGCCCAAGTTATGTAAGACTGAATTAAATAA ATGGCTTAACTGGTCCCCGAACTTTATCAAATGTGTGATTTTTGTCCTTATTAAAAAAAGGTTAAATATTCTTTCCGTCC CTAAACTATAGCGAATTTTTTATTTCCGTCCCTGAACTAAAATTACGATGGTTTCCATCCCTGTACTTAGTAAACCGTTT GTTTTTTACCCTTTGACCATGTTGACTGCTCATGTGTGATTCCAACGTGTAGGTCAGTGCTGATGTGGAGGTAATTATGC CGGTTTAGCCGGTTTTTCAATTTTATTTTTAATTTTTATTAATAGAAAATCCTTTTTTACTAAGTAAAAACATTTCAACG TTTAATTTTACTTTTTAAAGGTCAGAAATGTTCATCATCCTTTCTTCTCTTTTCTTCTACTGAAGCCGTAGCTCCACTCT CGCCGCCGTAGCTCCACTGTGTGGTTGTTCTCATCATCTCACCGCCGCTGTCGCCGGGTTTAGGTTCGCAACAGGTAAGT ACTTGATCCCTTCTTTTTTTGATTAGGTTTCGATATCCCCAATGTCCCTTCTTAATCGCGAATTTAGGTTCTCACCATAT GCGATTGATACCTAACCTTAATCACGAATTTGTTGTTGATTTAGGGTTGGGAAACAATATCATAACTATTGGGTAGCAGT TTCGATTATGTATGGACCAAATCCATACTGTAAATTGCTAGTTTGTTGTTGCTAGTATGTAAACTAATGCATACTGTCGT TATCAATTTGATTGTTGCTAGAGTTAGTTACAAAAGATCAATTGATTTCAAAACATATAAGAACATTTTCTACAGAAATA TTGCTCTTACATGACCTTAATGAAGTATCAATTCATGAACTCATTTTCCTACTACTGTATACTCCATATATGTATTTTAT TTACTTTTGTTTTTGAACTCATATGGATTATGTATGGACCAAATCCATACTGTCAATTTGCTGTTGCTAGTTTCTAAATT TGGGCCTTCTAAATTTGATTTATGTATGCGTAGTAACAAAATAAATGTGTGTGTGCTGTAGGAAAAAATGACATTCACTG CCAAATTTCATCACAGTGGTGGATTTGTGTATATCCCTGGGCCTGTGTATGAGGGTAAACTCACTACATTCGAAGACTTA GATAGTGACAGATGGTCTTATTTTGAGATTGTTGACATGGTAAAGGAATTAGGATACACTGGTGGGTTTCAAATGTGGTG GAAAAGGAATGAAGATGATATTGATACTGGATTGAAGCCGATTACGAAGGATGTTGAAGCAATGGAGGTTTCAAAATATG CTGAGAAGAATATGTGTGATGTCCACGTGTATAATATTAATGATGAGCCTAATGTACATAATGCAGCTAATGAGGTGGTT GCTGAGGTTCAAGTCAATGAGCCTATGGTTGGTGAAGGGGGGAAAGGAGATGATTCTGGGAAAGGAAAGAAGGTTGGTGA AAGGGGGAAATAAAGTGCTTCTAGGAAAGGTAAGAAGGTTGCTGAAGGAGGCAAAGAAAGTGCTTCTGGAAAAGGTAAGA AGGTTGCTGAAGGAGGGAAAGAAAGTGCTGGTGGGAAAGGGAAGAAGGTTGCTGGTGGTGTGAAGAATGTTAAGCCAAGG AGGAGGAGTAACAGAATTATGAGTGGTGCTGTGAAATCTGGTGTGAAGAGGCCTGCTGAGACTATTGTTATTGAGGGTAG CAGCAGTGATGAGTCACTTCAAGGTGTTCATTTGAGTGACAGCGAGGAGGAGAGAGATCTTGCCATGGATGATGGATTTA ATATGCCTGAGAATGATGACATTCTGCACAACATCTATGAAAACACTTTTGGTATGAACTTTAATTTGCTTACACTTAGT CTTTTTTTTTTACTTTCCTTTTTGAGTTTCTAACCTATTTCTGTTTCACTTACAGGGACTCAAACTTCTCATGGTGTGGG TGTAGAACCTGAGAGGGAGGAGGGGAATAATGAGGATCATGACATGGAATATGAGTACTTTTTTGAAGAGCTTGACAGTG CCTCTGATGCTGATGATGAGATTGAGGATGGACCTAGGGAAAGGAACCTTGTATTTAGAGAAGGAGAGCTGTCTAAGGAA TTTAAATTCAAAGCTGGCATGGAGTTTCTGTCTCTTGATCAGTTCAAACAAGCAGTCAAGGTACACTCTGTGTATATTGG GAGAGAGGTTTACTTTCCAAAAAATGATTCTATTAGGGCGAGAGCTGTGTGCAGAAAGAAGTGTGGATATTTCATCCTTT GTAGCAAGGTGGGGGGGAAGGAGACTTACATGATCAAGACCATTTGTTCTAAGCATAAATGTGGAAGGTTGTTTAACAAT AAGAATGCAACTGCAAGGTGGGTTGGCAAGGTTGTTGCTAAGAAGCTTCAAAACCACCAAAAAATCAAGATTAATGAGAT TGTTGCTGATATCCAACAAGACTATTGCACTGGGATCACAACATATAGGGCTTGGAAGGCTAGACAAATTGCAAAGAACA TAGTTGATGGGGAGGCAGCAAAGCAATACACCCTGCTATGGGCATACAGTGCAGAATTAAGGAAAGCCAATGCTGGCAAC ACTTGTAAGATAAACATGTACAGACCTTCACTGGCTGTGCAACCTAGATTTGAAAGGTTCTACATGTGTCTGGATGGCTG TAAGAGGGGATTCAGAGCCTCCAGACCATTTATTGGTGTTGACGGTTGTCATTTGAAGACACAGTATGGTGGGATATTGT TAATTGCTGTAGGGAGGGACCCCAATGACCAGTATTTTCCCTTAGCTTTTGGTGTAGTAGAGATGGAAACCAAAGACAGT TGGAAGTGGTTCTTGGACCTTTTGTTGAGGGATATTGGGGAGTCTAGGTGGGTGTTCATATCTGACCAACAAAAGGTATG AATTTTAATTTGCTAACACTAAGTTTTTTTTCTACTTTCCTTTTGAGTTGCTAACACCTATTTCTGTTTCACTTTACAGG GACTCATACCATGCTTCGAGGAAATGTTGAATGGTGTGGAACACAGATTTTGTGTGAGACACTTGTATGCAAACTTGAAG AAGAAGTTTGGTGGAGGGACTGTCATCCGGGACCTTATGATGGGAGCTGCAAAAGCAACACATCATCGGGAATGGCATAC AAAGATGCAACAACTAAAGGAAATTAATGAGCTTGCATTCAATCGGTTAGCTGCAATCCCAACCAGATCCTGGTGTAAAC ATGCAATGAGCTTCTACCCCAGATGTGATGTCATCATCAACAACCTGTCTGAATCCTTCAACAGCACAATTTTGGTGGCT AGAGATAAGCCTATATTGACAATGTTTGAGTGGATAAGGACTTACTTGATGAACAGATTTGCTGTCTTGAATGAGAAGAT GTCAAAATGGAATGGAAATGTTTGTCCTAAGCCTAGAAAGAGGCTGGATGGAGAGATGCTATATGCTGGAAACTAGATCC CTAAGTGGAATGCTGAGGGTGTGTTTGAAGTTCAACACTACATAAACACAGGTGATAGGTTTGTTGTGGACTTGAACAAG TTTGAATGTAGTTGTAGGTTCTGGCAGCTAGTTGGGATACCCTGTAGACATGCATTGGCTGGAATCAATACTAGAGGAGA GAATGCAGAGACATATGTCCATATGTACTACAAGCGAGAGGCTTATGCACAGTGTTATGGTAACACAATTACACCAATTA ATGGTGTGAACCAGTGGGAACCTTGTGCTGAGACAGTTGAAATGCTGCCACCAACTTACAAGAAAGGGCCAGGGAGACCA AAAAAGCTGAGGAGGAGGGATCCAATAGTGGAGGGGAACACAACAAGAGTCAGCAGAGAAAGAACAAAAATGAAGTGCTC AAGGTGTCAGCAATATGGCCACAATACCAGAACATGCAAGAACCCACCAGCTCCAAACAACCCATTACCGAAAAAAACCA AAGGGAAGGGAAAGGTGAGAAGTCATAATTTCTACCTACTTGTGGTTGTTATAATTTCTATATGGATGTCATAATTTCTA CATACTTGTGGTTGTTACAGAAGTCATCAGCAGCAGCAGGAGATGGAGTAAATGAAGCTGGATCTTCTTCTCGAGCACCA CAAGCTGCACATGGACCACAAGCTGCACCTGCACCACAAGCTGGAAATCAGAGAAGAAGAGGACCAGGGATAACTATTGG CACATCGTCTGGATCTGCAGCACCACAATCTGTACCTGCACCATCTCAAGCTGGATCTGGAATAACTCAACCTGAATCAT TGCCAGCTCAAGCTGGACAGGGTGGGACAAGCTCTCAGGTTAATGATAAGCTAAGGCATTTGCATAATTTTGACATGCAG TTCAATGGAATGAAAATTGTTGTAATTGATTTGTATTTTATGTTTCAAGCTCCAAGGAACACTACCAAGGCTCCCAGGAA GAATAAGGGAAAGAGTGTTGCATCTCAAGAAGCTACTGGACCAGTGGTGGGGACTAGAGATGTTGTGGCTGCAACACAAG AGAGTGTGGTGAAAAAGACTTGAAGACTAGTTAATGTTATGTTCACTTTTTTGGTACCAGACAAGGGTTTCTGTTTGATG TATGTAAGGGCAATTTAAATTAAAAGTATGTGGGGACATGGTGCACTAGTTGCACATGGGAATATTTTGGTACAAGTGAA ACAATGACACTTTAACTTTAGGGTCTTAACTTTATGTTGTTGATGTTGATCAATTTGACATTATGTAACTATTTTATAAT CAAATGCACATGGTTTGTGATGTTTCAGCAACGGGTCAACATATTTATATGGTTATGAATGTTTACATGTCAAGAACTAA CAGGTGCAAGGAAAAAATAGGATTAAAATCTC
CDS sequence (LotjaGi1g1v0267700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGGTGCTGTGAAATCTGGTGTGAAGAGGCCTGCTGAGACTATTGTTATTGAGGGTAGCAGCAGTGATGAGTCACT TCAAGGTGTTCATTTGAGTGACAGCGAGGAGGAGAGAGATCTTGCCATGGATGATGGATTTAATATGCCTGAGAATGATG ACATTCTGCACAACATCTATGAAAACACTTTTGGGACTCAAACTTCTCATGGTGTGGGTGTAGAACCTGAGAGGGAGGAG GGGAATAATGAGGATCATGACATGGAATATGAGTACTTTTTTGAAGAGCTTGACAGTGCCTCTGATGCTGATGATGAGAT TGAGGATGGACCTAGGGAAAGGAACCTTGTATTTAGAGAAGGAGAGCTGTCTAAGGAATTTAAATTCAAAGCTGGCATGG AGTTTCTGTCTCTTGATCAGTTCAAACAAGCAGTCAAGGTACACTCTGTGTATATTGGGAGAGAGGTTTACTTTCCAAAA AATGATTCTATTAGGGCGAGAGCTGTGTGCAGAAAGAAGTGTGGATATTTCATCCTTTGTAGCAAGGTGGGGGGGAAGGA GACTTACATGATCAAGACCATTTGTTCTAAGCATAAATGTGGAAGGTTGTTTAACAATAAGAATGCAACTGCAAGGTGGG TTGGCAAGGTTGTTGCTAAGAAGCTTCAAAACCACCAAAAAATCAAGATTAATGAGATTGTTGCTGATATCCAACAAGAC TATTGCACTGGGATCACAACATATAGGGCTTGGAAGGCTAGACAAATTGCAAAGAACATAGTTGATGGGGAGGCAGCAAA GCAATACACCCTGCTATGGGCATACAGTGCAGAATTAAGGAAAGCCAATGCTGGCAACACTTGTAAGATAAACATGTACA GACCTTCACTGGCTGTGCAACCTAGATTTGAAAGGTTCTACATGTGTCTGGATGGCTGTAAGAGGGGATTCAGAGCCTCC AGACCATTTATTGGTGTTGACGGTTGTCATTTGAAGACACAGTATGGTGGGATATTGTTAATTGCTGTAGGGAGGGACCC CAATGACCAGTATTTTCCCTTAGCTTTTGGTGTAGTAGAGATGGAAACCAAAGACAGTTGGAAGTGGTTCTTGGACCTTT TGTTGAGGGATATTGGGGAGTCTAGGTGGGTGTTCATATCTGACCAACAAAAGGGACTCATACCATGCTTCGAGGAAATG TTGAATGGTGTGGAACACAGATTTTGTGTGAGACACTTGTATGCAAACTTGAAGAAGAAGTTTGGTGGAGGGACTGTCAT CCGGGACCTTATGATGGGAGCTGCAAAAGCAACACATCATCGGGAATGGCATACAAAGATGCAACAACTAAAGGAAATTA ATGAGCTTGCATTCAATCGGTTAGCTGCAATCCCAACCAGATCCTGGTGTAAACATGCAATGAGCTTCTACCCCAGATGT GATGTCATCATCAACAACCTGTCTGAATCCTTCAACAGCACAATTTTGGTGGCTAGAGATAAGCCTATATTGACAATGTT TGAGTGGATAAGGACTTACTTGATGAACAGATTTGCTGTCTTGAATGAGAAGATGTCAAAATGGAATGGAAATGTTTGTC CTAAGCCTAGAAAGAGGCTGGATGGAGAGATGCTATATGCTGGAAACTAG
Protein sequence (LotjaGi1g1v0267700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGAVKSGVKRPAETIVIEGSSSDESLQGVHLSDSEEERDLAMDDGFNMPENDDILHNIYENTFGTQTSHGVGVEPEREE GNNEDHDMEYEYFFEELDSASDADDEIEDGPRERNLVFREGELSKEFKFKAGMEFLSLDQFKQAVKVHSVYIGREVYFPK NDSIRARAVCRKKCGYFILCSKVGGKETYMIKTICSKHKCGRLFNNKNATARWVGKVVAKKLQNHQKIKINEIVADIQQD YCTGITTYRAWKARQIAKNIVDGEAAKQYTLLWAYSAELRKANAGNTCKINMYRPSLAVQPRFERFYMCLDGCKRGFRAS RPFIGVDGCHLKTQYGGILLIAVGRDPNDQYFPLAFGVVEMETKDSWKWFLDLLLRDIGESRWVFISDQQKGLIPCFEEM LNGVEHRFCVRHLYANLKKKFGGGTVIRDLMMGAAKATHHREWHTKMQQLKEINELAFNRLAAIPTRSWCKHAMSFYPRC DVIINNLSESFNSTILVARDKPILTMFEWIRTYLMNRFAVLNEKMSKWNGNVCPKPRKRLDGEMLYAGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 50 | 50 | - | – | |
| MobiDBLite | 30 | 46 | 17 | - | – | |
| PANTHER | 113 | 545 | 433 | 2.0E-84 | – | |
| PANTHER | 113 | 545 | 433 | 2.0E-84 | – | |
| Pfam | 324 | 416 | 93 | 3.2E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0267700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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