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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0271400 |
| Transcript ID | LotjaGi1g1v0271400.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional uridylyltransferase/uridylyl-removing enzyme; TAIR: AT1G76990.1 ACT domain repeat 3; Swiss-Prot: sp|O49285|ACR3_ARATH ACT domain-containing protein ACR3; TrEMBL-Plants: tr|K7KM40|K7KM40_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0271400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:66244693..66248162) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTAGAGTTTGCTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAACAAAATCAATCCTCCAAGGTTCACTGT TATCTTTGAATAAAATAAATTTAAATTTTAGAGATGATCTTCATGGATATTTGAACATTTTCTTAAAAAATTTCAAATTT AACTGATTTTGGTTCAGCCTTAAGGTAATTAAAAGGGTAATATATAAATTTTAAAAACTGCTTTAAGGAACACTAGCACT TGTTGAAAGGAAGAAGTGCATTGTTGATGCTAAACTCTGTTTGTAATTTGCAGGGTCTCAGTGGACAATGATAGTTGTCG TGATTGTACGTTGATCAAGGTATAATTTCTCAAAATAATAAATTATGACATTTTTTCCATTGCCACTTGGTGGATTTTAA AGTGGAGCTTACATATCTATCTGGCTTGTGTAGATTAAATCATGATTTTTCATTATGCCCCAATAATGCAGGTTGATAGT GTCAACAAACCGGGAATTCTGCTCGAACTGGTTCAAATCTTGACAGATCTTGACTTCATTATTACCAAAGCTTACATATC TTCTGATGGGGGATGGTTTATGGATGGTATGTGTGTGAATTGTCATGTTCTTGATTGCTATCATTGGTATCATGGTATGC GTGTGAAGGCAAAATCACGGTGGACAAAAGCAACTTTCCTTAGCTTCCGCAATTGTCTACAATGATTTTGACCTCATCGT GGTTTTCACAGTTTATCAAAACATGCACTAAATCTGGTAACTGCTGAAAACTGTGGCTGCTATGAAGTGGCTCTTCATAG TTGTCATGTTTGTCTTGAAATTGTGATGTGTCCAAGAGAGGATTGAGTACTTTAATTTGTATCTTTACATTGCATCTAAA TGGTTCACCTAATGGAATGCAGTATTTCATGTCACGGACCAGCAAGGAAAAAAGATAACAGATAGCAAAACCATTGACTT CATTGAAAAGGTATACATTTTTTATCTTCTAAAATACTTACCTTGTTAGATCATGCCAAAAGTATCATTTTATATTTTGA TCTTATTATCTATTGGTATTAGTTTGCATAATTCTTTATACACATCATAATTTGTTTCTTTACTTAATTAGGATTAGGGG TCCTGCCATTATCATGATCTGTTTTCTTATATGAAGATATGGTAGGTATTTAACCATGTAAAAGTTTCAGGCTCACTGGC AAAAAATTGAAGTAGCCAAATCCTTCAATAGTAATCTAAATGTTTTCTAGACATTCAGTTATATTAATCATGTTAACAAC TGCAAACAGTTGCATATTAGTATAATGCATATTAAAAACTGAGAGCTACTTTGTTAATATATAGTTTTTCTTACAATAGG TTCTAGGACCAAAGAGCAAGAGCACAACAGAAGGGGTGAAGAATTGGCCAGGGGAACGAGTCGGAGTGCATTCTGTTGGT GACCACACAGCCATTGAGCTCATCGGCAGAGACCGCCCCGGTCTCTTATCTGAGATCTCAGCTGTCATTGCCAACCTCAA CTTCAATGTGCTTGCAGCTGAAGTTTGGACTCATAATAGCCGAATTGCTTGCGTCCTTTATGTCAACGATGTTACAGCAC AATCCATGTGTGATCCAAACAGGTTATCACTCATGGAGGAACAGCTCAACAACATCCTACGAGGGTGTGATGAGGATGGT GAGAGTGTTTCAAGGACCAGCTTGTCCATGGGATTCACCCACATGGACAGGCGGCTTCACCAAATGTTGTCAGCGGATCG GGATTATGAGAGTTCTGGAGCAATATCAGGTGTTGATGTTACTCCCTCTTTCAGGCCTAAAATCTCAATAGTAGGTTGTG AGGAGAAAGGGTATTCTGTGGTTAGTGTCAGGTGCAAAGATAGGGCAAAGCTCATGTTTGACATTGTTTGCACTCTTACT GATATGCAGTATGCTGTCTTCCATGCCACAATACTATCAGAGGGCCCTTATGCATCCCAGGTAAATTAAGTTATCATTAA TCCATTCTTTATGTTAATTTAGTGCATGTTCAGAAACTCGTTTGAAGAACAGGATGAAGCAAAAATTATGGTGGACAGAA GCAACAGAAGAGAAACTTTTCTTAGCTTTTGCTGCTTCTATCCACCATGATTTTACCTTCACTGTACTTTATAAATGATT TTCCAAACATGCACTTAGTGATCATGCATATAGCTAAGTTGAGAGTTTGCTGAGTCGAGTATACGTAGCACATCTAGCTT GTAAGGAATATCATGAATCAATTATCCCGAAAACTTAACACGTTGGTGAAGACACGTGAATAGTTTTATATTATGTTTCT AATTAGAAACTTGTCATGTTTCTTAGGAATCATTTCTTTAAGACATAAAATACGGAAATGCTTATGGTGAATTTGTGCCT TCCAATGGGCTGAGGAAGAAACAGATAATGTTTCATAGACACAATGAATATCTAGATTTTTGAAAGTTGCTTCTCACTTA AGATTTTTGAATTTGTGCCTTCCAATGGGATTCAAATCCTTTAATCTGTCTAGGGAGTCTCTAAGGTTACTAGTTGGCTG TGGTGTGATTTGCGTGGAGAATTCTTTTTGTCTTAAAGGCTTGGATCTGTTGTTAAATCTGGGCTTCTCTCTTGCGGCAT AAGTGTTTAGTTCAGATTTCTATTCCTTGTTTGATCCTGTTTCTTTTCTTTTTTTTTCCCTGTACAAGGGTTGGGGTACC CCTAGTACCCCTCTTATTTAAAAAAAAAACTTAAGATTTCTAAACTTGCTGCAATTTGATTGTTCCAAAACGTTTGGAGA CAAATTCAACCTTGGTATTAAATATTTAGGAAATTAGATTTAGAAGTAGTGAGATCTAATTGAGAAACGTGGACTAAAGT GTTGATTTTGCACTTTAGGAGTACTTTATTCGGCATATGGACGGATGCACGCTTGATACCGAAGGAGAGAAAGAAAGGGT CATCAAATGCATTGAAGCTGCTATTCGAAGAAGAGTAAGCGAGGTAAAGTGCAAAGTGCATATTTAAATTGATTTCTACA TGCTTCTTTAACTTCTCAAAATTGATTCTGACTTCATAATGAATTGTAGAAGGATTTCTAAACACATCGTTAGTCTTACT ATTGATTCTTTCGATTGTAATCACAGGGAGTGAGCCTTGAGCTATGTGCAAAGGATAGAGTGGGGTTGCTATCCGATGTA ACAAGGATTCTCCGAGAGAATGGCCTAACGGTTTGCAGGGCAGGTATATCAACAAGAGGGGAGCAAGCCCTGAATGTGTT CTATGTGAGGGATGCGTCGGGGAAGCCGGTGGATATGAAGACCATGGAAGTGCTTCGAAAAGAAATAGGGAAGACAATGA TGGTGGATGTGAAGAGAGTGCCAAGCAATGACAAAGTACCAGAAGAGACAAGAGAATGGGCTAAAACCAGCTTCTTCTTT GGTAAATTGTTGGAAAGGTTCTTGACTTAG
CDS sequence (LotjaGi1g1v0271400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAGAGTTTGCTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAACAAAATCAATCCTCCAAGGGTCTCAGT GGACAATGATAGTTGTCGTGATTGTACGTTGATCAAGGTTGATAGTGTCAACAAACCGGGAATTCTGCTCGAACTGGTTC AAATCTTGACAGATCTTGACTTCATTATTACCAAAGCTTACATATCTTCTGATGGGGGATGGTTTATGGATGTATTTCAT GTCACGGACCAGCAAGGAAAAAAGATAACAGATAGCAAAACCATTGACTTCATTGAAAAGGTTCTAGGACCAAAGAGCAA GAGCACAACAGAAGGGGTGAAGAATTGGCCAGGGGAACGAGTCGGAGTGCATTCTGTTGGTGACCACACAGCCATTGAGC TCATCGGCAGAGACCGCCCCGGTCTCTTATCTGAGATCTCAGCTGTCATTGCCAACCTCAACTTCAATGTGCTTGCAGCT GAAGTTTGGACTCATAATAGCCGAATTGCTTGCGTCCTTTATGTCAACGATGTTACAGCACAATCCATGTGTGATCCAAA CAGGTTATCACTCATGGAGGAACAGCTCAACAACATCCTACGAGGGTGTGATGAGGATGGTGAGAGTGTTTCAAGGACCA GCTTGTCCATGGGATTCACCCACATGGACAGGCGGCTTCACCAAATGTTGTCAGCGGATCGGGATTATGAGAGTTCTGGA GCAATATCAGGTGTTGATGTTACTCCCTCTTTCAGGCCTAAAATCTCAATAGTAGGTTGTGAGGAGAAAGGGTATTCTGT GGTTAGTGTCAGGTGCAAAGATAGGGCAAAGCTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAGTATGCTGTCT TCCATGCCACAATACTATCAGAGGGCCCTTATGCATCCCAGGAGTACTTTATTCGGCATATGGACGGATGCACGCTTGAT ACCGAAGGAGAGAAAGAAAGGGTCATCAAATGCATTGAAGCTGCTATTCGAAGAAGAGTAAGCGAGGGAGTGAGCCTTGA GCTATGTGCAAAGGATAGAGTGGGGTTGCTATCCGATGTAACAAGGATTCTCCGAGAGAATGGCCTAACGGTTTGCAGGG CAGGTATATCAACAAGAGGGGAGCAAGCCCTGAATGTGTTCTATGTGAGGGATGCGTCGGGGAAGCCGGTGGATATGAAG ACCATGGAAGTGCTTCGAAAAGAAATAGGGAAGACAATGATGGTGGATGTGAAGAGAGTGCCAAGCAATGACAAAGTACC AGAAGAGACAAGAGAATGGGCTAAAACCAGCTTCTTCTTTGGTAAATTGTTGGAAAGGTTCTTGACTTAG
Protein sequence (LotjaGi1g1v0271400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARVCWPYFDPEYENFSNKINPPRVSVDNDSCRDCTLIKVDSVNKPGILLELVQILTDLDFIITKAYISSDGGWFMDVFH VTDQQGKKITDSKTIDFIEKVLGPKSKSTTEGVKNWPGERVGVHSVGDHTAIELIGRDRPGLLSEISAVIANLNFNVLAA EVWTHNSRIACVLYVNDVTAQSMCDPNRLSLMEEQLNNILRGCDEDGESVSRTSLSMGFTHMDRRLHQMLSADRDYESSG AISGVDVTPSFRPKISIVGCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYAVFHATILSEGPYASQEYFIRHMDGCTLD TEGEKERVIKCIEAAIRRRVSEGVSLELCAKDRVGLLSDVTRILRENGLTVCRAGISTRGEQALNVFYVRDASGKPVDMK TMEVLRKEIGKTMMVDVKRVPSNDKVPEETREWAKTSFFFGKLLERFLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 449 | 449 | 2.5E-258 | ||
| PANTHER | 1 | 449 | 449 | 2.5E-258 | – | |
| SUPERFAMILY | 32 | 104 | 73 | 9.97E-13 | – | |
| CDD | 35 | 105 | 71 | 4.07006E-39 | – | |
| ProSiteProfiles | 37 | 115 | 79 | 10.34 | ||
| Pfam | 37 | 85 | 49 | 1.7E-6 | ||
| Gene3D | 125 | 205 | 81 | 3.6E-10 | – | |
| SUPERFAMILY | 126 | 202 | 77 | 3.77E-13 | – | |
| ProSiteProfiles | 131 | 212 | 82 | 12.413 | ||
| Pfam | 131 | 199 | 69 | 1.2E-8 | ||
| CDD | 265 | 339 | 75 | 3.28E-40 | – | |
| SUPERFAMILY | 341 | 411 | 71 | 2.32E-11 | – | |
| CDD | 343 | 414 | 72 | 5.3422E-36 | – | |
| Gene3D | 345 | 433 | 89 | 7.7E-8 | – | |
| ProSiteProfiles | 345 | 422 | 78 | 12.895 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0271400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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