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LotjaGi1g1v0279300.3

Overview

Field Value
Gene ID LotjaGi1g1v0279300
Transcript ID LotjaGi1g1v0279300.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Activator of 90 kDa heat shock ATPase; TAIR: AT3G12050.1 Aha1 domain-containing protein; Swiss-Prot: sp|Q55DB6|AHSA_DICDI Activator of 90 kDa heat shock protein ATPase homolog; TrEMBL-Plants: tr|I1N9A4|I1N9A4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0279300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:68202289..68202866) extracted from Lotus japonicus Gifu genome v1.2.

GCGAGGGATTTGTATGAGATTTTGATGGATGAGAATAGATGGAAGGGTTTCACGCAGAGCAATGCGAGGATTAATAAGGA GGTTGGTGGGGATTTCAGCATTTTTGATGGGTCGGTGACAGGGACTAATTTGGAGTTGAAGGAAGCGAAGTTGATTGTGC AGAGATGGAGATTTGGGAGCTGGAATGATGGGGTTGTTTCCACGGTGAGTGTGGTTTTTGGTTGATTGAGCTGAGTGTTT GAATGGGTTGGAAGTTTGAATCAGTGTTTTTGATGAGTGGTTGTTGGTTTTTTGCAGGTGAGGCTTGTGTTTGAGGAACC TGAACCTGGTGTTACTGTTGTTAAGCTGACACATAGTGATGTTCCTGAAGAAGATAGGTGAGTGTTTGGTTTGATTGTTA CTTGTTGCGATGATTGGTGTTGTGGAATGGTTGGATATTTTTCATCTTGTTTTGTTTTACTGAGATGGTTGCTTGTTAAT GCAGGTATGGGAATGCCACTGTAGTGGAGAACACGGAAAGGGGGTGGAAGGATCTCATTTTCCAAAGGATACGTGCAGTT TTTGGTTTTGGAATTTGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0279300.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATGAGAATAGATGGAAGGGTTTCACGCAGAGCAATGCGAGGATTAATAAGGAGGTTGGTGGGGATTTCAGCATTTT TGATGGGTCGGTGACAGGGACTAATTTGGAGTTGAAGGAAGCGAAGTTGATTGTGCAGAGATGGAGATTTGGGAGCTGGA ATGATGGGGTGAGGCTTGTGTTTGAGGAACCTGAACCTGGTGTTACTGTTGTTAAGCTGACACATAGTGATGTTCCTGAA GAAGATAGGTATGGGAATGCCACTGTAGTGGAGAACACGGAAAGGGGGTGGAAGGATCTCATTTTCCAAAGGATACGTGC AGTTTTTGGTTTTGGAATTTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0279300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDENRWKGFTQSNARINKEVGGDFSIFDGSVTGTNLELKEAKLIVQRWRFGSWNDGVRLVFEEPEPGVTVVKLTHSDVPE EDRYGNATVVENTERGWKDLIFQRIRAVFGFGI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13009:SF19
1 110 110 9.0E-60 –
Gene3D
G3DSA:3.30.530.20
1 112 112 3.8E-24
IPR023393
PANTHER
PTHR13009
1 110 110 9.0E-60
IPR039981
SUPERFAMILY
SSF55961
2 112 111 6.77E-16 –
Pfam
PF08327
5 109 105 5.3E-11
IPR013538

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0001671
Molecular function ATPase activator activity Binds to and increases the ATP hydrolysis activity of an ATPase.
Subterm of
GO:0051879
Molecular function Hsp90 protein binding Interacting selectively and non-covalently with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0279300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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