Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0285500 |
| Transcript ID | LotjaGi1g1v0285500.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcineurin B-like protein; TAIR: AT5G24270.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|O81223|CNBL4_ARATH Calcineurin B-like protein 4; TrEMBL-Plants: tr|G7J6W3|G7J6W3_MEDTR Calcineurin B-like protein 4-1; Found in the gene: LotjaGi1g1v0285500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69390441..69395660) extracted from Lotus japonicus Gifu genome v1.2.
ATGCATAACAAACTGCGACTCGGTGCGTAAAACGTTTTTTCAGAACACTACACTTGCATATACTACCTCCATTTCTCCAA TTCAGCAAGCTAATACCAAATCTTTGTGCACAATCTACTAATTCAACTGCTGGTTTTTCTAAGATACCAGGTCAGTTTCT CTTCTTAATTTCTTGGTGTTTTTGAAGTGATCATTCATTATTTTCTATCTTCAACGCTGTGTTTGTTGCTCACGTTTTCC TCCTTTTTCGGTAGAGCGATTGTGAGTTCAGATTCATGTGGAAAAAATCTGCATTTGAACAAAACCGTTAGGTAGTTCTT ATGAATTGCGATCTTATGTTGTTTCTAGATTTTTCCGAGTCGGCGAGTGTTGTTGCATTTTGGCTGAGTTGTCAATGAGT CATGTCCGATTCGGAAGAATAATTAATTAATTAATTAAGCTTTTTGGATTGCTCTATAGGAAACATAAATGAAATCAGAT GCTGATTTTTCAATTGTTTATTTGAAACCACAAGTTTTTTATTTGATTATAGTGATATTTGTCCTGGGTTGCGCGCGAAT ATTAAGTTGGGAATTCAATTTCTACTTTGCTACTTCTGGACAGTGTAAAATTTTGTACTAGTTAGTTGTTGTCTCCAGCT TCCAGTATTGTGATTTTCTTCTAATCTGTGTCGAAAATGATCAAGCCGGGTAGGACAGACAGGCGGTAAAGCTTTTCTTA CCAAGTATTTAACGTAGCCGCATCCACAGGGGGCTTGAACTCGAGACATTTACTTAAGTTAGAGCAATTTTGTGCGATTA ATGTACGCGTTTGGTGGTTAATTCTTTAATTAACAATAAATAGGATTGAGAAAGCCAAGAAATTATGAGGTATGATTGAT AAGTGTGCCTTTGGGATGACTCCAGTGGCTCTAGAGAACTACTACTAGTCACATGCTTTATTCTTTATAATTTGCTCCTG TTTGGTAGGGAAATAAAGAATTAAATATGGGTTTTGAACCTTGCTTCCATTACTGTTGACAGCTTAATGTACTAGCAAGT GGGGGAGGCTTGATCTGTTCCCCTTGAAGGCTTAAAATTGTAGGTAGCTAGTTGTCTATTTACTTATTAAGTCTTCTTTA CTTCATGATATGACATTCTTTTTGGAAGGTTTCTGAATTATAAACATGATAACATTTATTTTCTTTTTATATTTATAATT TATCAAACATTGTTAAGTTGCAATTGTTTTTGACAGTACTCGGTTGGTTGGTACCATGGAGACACTAGCAGGTGGTATGA GACCTTGGAGTAGCTCCTTGCTTATTTGATTTGGAGGTTACCTTATAGTTTTTTAAATATTTTTCTATTTGGCAATGCAT AGTGACTTATATTTCATGTCTCTTTCATTTGGAAAATGAATTGGTAAATCATTTGAGCCATCAATTAAGAGACAAATTAG TTTGTTGAAATAAGATAGTGAAGTGTATAGATAAAAAATACGCATTTAAGGGTGTGCTGATAAGTACTACTAATTTTCCA GTTTCATGTTGTTTTATACTGCGTCTTGACTCTTGAGCCGTTGAGTATATTATGAGACCTTGAAAGAAACATTTTTTAAA AAAGAAAGAGTCGTTTGAATGTGAGAGCATGCTTGGGTCATCAGACTTGTCTTACCTTATGGATTTTTCCAAAGTGGACA AGGAGAAACCATTTCTTTCTTTCTTTCTTTCTTTCTTTATCTGCATGCTTTGAATATTTCTGAGAACTGTGGAAAGTCAA ATATTCTGAACCATCTGTTCCCAATTCCCAATAGATAAACATGAACTCGACCTTCAGAAGATGTGTAATTTTAATTTAAG GCCATATATTGCTTAAACATATTTATGTATTGTATAGAACTATAGATCAATGTGATAGGAACATAGTTCATGTTGTAAGC ATAGGAGTCATCACTTATCCTTAAAGGAAACTTAAGGGATGAAATGACGTGAGTCAGTAATTCTATTGAGAATTGAGATC CTTTATATGTTTTATTTTTTTCTGGTTCTATTCTGCTTTGTGTCATTTATCTTTGACTGAATTGTTTGTTTACATTGGGT GGTTTGAAATTTAGATAATCCTGTTGTGCTTTTTCCAATTCTCCTTAAGGTTGGCCTTCTGGAGATTCATTTAGCTCCAG TAGTATAGTTGTGATTGAAACTTGAACTGTTTTTGCAGATATTCAAATCCTGCTGGTCCAAGTGGCATCCCTGGAATGAA TCTATTGTTTGTCAAGAAAATTGAGACTGAAGTTTGTGCTTATATTTAATTTCATGGGCTGCTATTGTTCAACTTCAAAG AAATATAAAACACCAGGATATGAGGAGCCCACTGTTCTTGCTTCTGAGACACCTTGTGAGTATCCATCATCAAGTGGTAA TTCTTGCAGCTGTGCTGTTGAATTTTATTTGGCATCTCCTAAGAAACATCAAGCTCCTCTTGTTAACTATCTTTGTCACT ACAATGCCATTCTGTTTGTGAATTTAGAAAATGAATGACTTAATATGCTTATAACGTTTGCTAAATTTTTTTAATGTATG CTGTTCAGAATAAACTGCAAAGTTAAAACTTCAATTTCATATTAGCTGTCTCAATCCTTTCAGTTTACAATAATTATTGA TAGTTGAATTTGACAAATGGTAATTTAATGAACTCTAGTCAAAACTATAGGTATCAATGTATACAAATCGATCTGGTTTT TCTCCATGTACACAGTTAATATGTAATCAAAACACAGTTGCATTTGCATTTTGCATAGGATGCTTTCCTTACTCTAGGAA ACTCTAATTAGTGTAAGAAAAGAAAGAAAACATACTTCAAAAACACGTGTTTGTTAATCACAAATTTTCGAGTTACAGAT ATGTATATTCCCTTTTAGAATCCATGTAAACAATCACTCACACACACGAACCACTTGGAGCAAGAGAAAATTGTTACTTC ATAATGTTGAATTGAAGTTTAAGCTATATTAAACACTAACACCACGTATACATTTCTCTCTTTCTATCTAATATATTTTC GACAGTCATTTCAAACATCTGAAAGTTCCTATCGTAGTACTGATGAGTGATGACTATTATATTTTGGTTTTTCATTCCAA ATGCAAAGCATTTAGTTTCATTCAACACAAAATCATGATTTCTCATTCTCGAGTACAATGTCAAGTTTCAAAACTTAATA AAAGAAGTTCTCTCTTTTTTCTCAGTTTCTGTGAGTGAAGTAGAGGCATTATATGAACTCTATATGAAGGTCAGCAACTC AGTTATTGAAGATGGTCTTATTCACAAGGTGAATTAGGAATTTTTTAAGATTATAGTGTAGATGGGATTTCCATACTATT GCATAAGTTACTTATTGGTCATCTTTACATCCAGGAAGAATTCCAGCTGGCACTTTTCAGGAATAAAAATGAGAGAAGTC TGTTCGCAGACAGGGTATGTAAATCCGACCTATGCCCTATAGCTTAAGATTCTTTGATCTTGTTCAAGTTCTTAAGATAC TTTCAGTGAAAGTATTTTATCTGTGACTTGTTATCTTGTTATACATTGACAGTCATGTCACCTCTCTTGAGTCTTAACAT GCCTGGCACCCTACTGTAATGCTTATCCATATTCATATTCATTTCTTCTTCTTTATAGATTTTTGACTTATTTGATGTCA AGCGCAATGGTGTCATTGAGTTCGGGGAATTTGTTCGATCATTGGGTGTTTTTCATCCAGATGCAGCTTTAGAAGACAAG ATTGCATGTAAGATTGATCTCCAAATTTTTGTTTCCGGTTTCATTAATTGTTTGGTCACGCATAGATACTGTATCTTCTA ACTGGAAATAAAATTTTGCAGTTGCTTTTCGGTTGTATGATCTGAGACAGACAGGGTATATTGAAAGAGAGGAGGTACTT TTTTTTCTCATTTCCCCATCGAATTACGAATAATTGCTCCTTTATTAGTTTCAACCTTTAAAGTATGCTCTCTTGAGTGG TCTATCTGCAGTTAAAGGAGATGGTATTGGCACTTCTGCACGAATCAGATCTTGTACTTTCAGATGATATGATAGAAATG ATTGTGGATAAGGTTCTTAAAATTTTACCTTATATTATTACTTTCAAGAGATCCTTAAAATTATTGTTCCTTAAGTTGTA AACCTTCTTCCTCAGACTTTTGATGATGCTGATACAAAAAGTGACGGAAGGATCGATCAAGATGAGTGGAAAGCATTTGT GTCTAAACATCCATCATTGATAAAGAACATGACTCTACCATATCTGAAGTCAGTATATACATTCTCCATGAAGCATTCAT TTCAGTAATTGGAATTTTAGAAAACAAAGCATTTCCAAGTTTTGATACTAAACTCTTATGTTCATGTCTGTCTTGCAGGG ATGTTTCCTTAGCATTTCCAAGTTTTGTGGTAAGAACAGAAGTTGAAGACTCAGAGCTGTGACTTTGGAAGGTTTTTGGC ATCACCAAGGATGTTGTTATCTTTGATTCCATCTCCTGATACCATTGCTGCCAAGAAAAGACCATTCCTAAGGTGCCAGA GACAAGGAATGAAGGATAATGATCCATAGTACAATTTTATCTGGTTCCATATCAGAGCAAAGAGCTTCTAGACTTGCAAA CGGCAATCTATAAGTGAGCTCTTTTCTAGTAGCTAAACATATACTGAAAGTGTTATATAAGGCTACAAATTATTCAGTTG GATAGGTTGTACATTTATGTATATATAAATTATGAGAGCTGCAAAGAGAGTAGCAGATCATGTAACTAGGCCATCTAGCA AATTGAATAAACATTAGCATGATTACTATTTACTAATAACATGGTTGGATCAGTTTCTCTTGAATCAAAATCCATTATAA CTCCGGAAGCTACCTTCTCCCCAAAATTTACTGGACGTAAGAATCAATTATAGAAATATTTCCAAACATGCATTTTTCCT CTCCAAACATTAAGAATCATGAATAGCATATCAAATTCATGTTTGAAATCTCATTTTCAAGTAATTATGCCATATCCCTT TGTTACATAACACACTTGAATCTTGAAACAATATGTGCTGCTTGAGTCGGGAAGAACAATGGTTAAATGGTGCTTTTAGC AAGGTGGGAAAGCCTGGACATCTCGCTAGTAAAAAAATCAGAGAGAAGTTTTCTATGGCTGTTACATTGTGCATCTTAAT ATGTGGATTCAATTTCTTCA
CDS sequence (LotjaGi1g1v0285500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTGCTATTGTTCAACTTCAAAGAAATATAAAACACCAGGATATGAGGAGCCCACTGTTCTTGCTTCTGAGACACC TTTTTCTGTGAGTGAAGTAGAGGCATTATATGAACTCTATATGAAGGTCAGCAACTCAGTTATTGAAGATGGTCTTATTC ACAAGGAAGAATTCCAGCTGGCACTTTTCAGGAATAAAAATGAGAGAAGTCTGTTCGCAGACAGGATTTTTGACTTATTT GATGTCAAGCGCAATGGTGTCATTGAGTTCGGGGAATTTGTTCGATCATTGGGTGTTTTTCATCCAGATGCAGCTTTAGA AGACAAGATTGCATTTGCTTTTCGGTTGTATGATCTGAGACAGACAGGGTATATTGAAAGAGAGGAGTTAAAGGAGATGG TATTGGCACTTCTGCACGAATCAGATCTTGTACTTTCAGATGATATGATAGAAATGATTGTGGATAAGACTTTTGATGAT GCTGATACAAAAAGTGACGGAAGGATCGATCAAGATGAGTGGAAAGCATTTGTGTCTAAACATCCATCATTGATAAAGAA CATGACTCTACCATATCTGAAGGATGTTTCCTTAGCATTTCCAAGTTTTGTGGTAAGAACAGAAGTTGAAGACTCAGAGC TGTGA
Protein sequence (LotjaGi1g1v0285500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCYCSTSKKYKTPGYEEPTVLASETPFSVSEVEALYELYMKVSNSVIEDGLIHKEEFQLALFRNKNERSLFADRIFDLF DVKRNGVIEFGEFVRSLGVFHPDAALEDKIAFAFRLYDLRQTGYIEREELKEMVLALLHESDLVLSDDMIEMIVDKTFDD ADTKSDGRIDQDEWKAFVSKHPSLIKNMTLPYLKDVSLAFPSFVVRTEVEDSEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 214 | 214 | 1.4E-127 | – | |
| PANTHER | 1 | 214 | 214 | 1.4E-127 | – | |
| Gene3D | 18 | 212 | 195 | 2.3E-62 | – | |
| SUPERFAMILY | 21 | 200 | 180 | 1.49E-42 | ||
| ProSiteProfiles | 68 | 103 | 36 | 11.222 | ||
| SMART | 72 | 100 | 29 | 6.7 | ||
| PRINTS | 76 | 97 | 22 | 1.8E-7 | – | |
| ProSiteProfiles | 105 | 140 | 36 | 12.114 | ||
| Pfam | 108 | 178 | 71 | 6.6E-10 | ||
| CDD | 109 | 179 | 71 | 3.33743E-8 | ||
| SMART | 109 | 137 | 29 | 1.5 | ||
| PRINTS | 123 | 141 | 19 | 1.8E-7 | – | |
| ProSiteProfiles | 149 | 184 | 36 | 10.971 | ||
| SMART | 153 | 181 | 29 | 0.21 | ||
| PRINTS | 169 | 189 | 21 | 1.8E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi1g1v0285500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…