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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0285500 |
| Transcript ID | LotjaGi1g1v0285500.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcineurin B-like protein; TAIR: AT5G24270.1 Calcium-binding EF-hand family protein; Swiss-Prot: sp|O81223|CNBL4_ARATH Calcineurin B-like protein 4; TrEMBL-Plants: tr|G7J6W3|G7J6W3_MEDTR Calcineurin B-like protein 4-1; Found in the gene: LotjaGi1g1v0285500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69390818..69395615) extracted from Lotus japonicus Gifu genome v1.2.
CACTACACTTGCATATACTACCTCCATTTCTCCAATTCAGCAAGCTAATACCAAATCTTTGTGCACAATCTACTAATTCA ACTGCTGGTTTTTCTAAGATACCAGGTCAGTTTCTCTTCTTAATTTCTTGGTGTTTTTGAAGTGATCATTCATTATTTTC TATCTTCAACGCTGTGTTTGTTGCTCACGTTTTCCTCCTTTTTCGGTAGAGCGATTGTGAGTTCAGATTCATGTGGAAAA AATCTGCATTTGAACAAAACCGTTAGGTAGTTCTTATGAATTGCGATCTTATGTTGTTTCTAGATTTTTCCGAGTCGGCG AGTGTTGTTGCATTTTGGCTGAGTTGTCAATGAGTCATGTCCGATTCGGAAGAATAATTAATTAATTAATTAAGCTTTTT GGATTGCTCTATAGGAAACATAAATGAAATCAGATGCTGATTTTTCAATTGTTTATTTGAAACCACAAGTTTTTTATTTG ATTATAGTGATATTTGTCCTGGGTTGCGCGCGAATATTAAGTTGGGAATTCAATTTCTACTTTGCTACTTCTGGACAGTG TAAAATTTTGTACTAGTTAGTTGTTGTCTCCAGCTTCCAGTATTGTGATTTTCTTCTAATCTGTGTCGAAAATGATCAAG CCGGGTAGGACAGACAGGCGGTAAAGCTTTTCTTACCAAGTATTTAACGTAGCCGCATCCACAGGGGGCTTGAACTCGAG ACATTTACTTAAGTTAGAGCAATTTTGTGCGATTAATGTACGCGTTTGGTGGTTAATTCTTTAATTAACAATAAATAGGA TTGAGAAAGCCAAGAAATTATGAGGTATGATTGATAAGTGTGCCTTTGGGATGACTCCAGTGGCTCTAGAGAACTACTAC TAGTCACATGCTTTATTCTTTATAATTTGCTCCTGTTTGGTAGGGAAATAAAGAATTAAATATGGGTTTTGAACCTTGCT TCCATTACTGTTGACAGCTTAATGTACTAGCAAGTGGGGGAGGCTTGATCTGTTCCCCTTGAAGGCTTAAAATTGTAGGT AGCTAGTTGTCTATTTACTTATTAAGTCTTCTTTACTTCATGATATGACATTCTTTTTGGAAGGTTTCTGAATTATAAAC ATGATAACATTTATTTTCTTTTTATATTTATAATTTATCAAACATTGTTAAGTTGCAATTGTTTTTGACAGTACTCGGTT GGTTGGTACCATGGAGACACTAGCAGGTGGTATGAGACCTTGGAGTAGCTCCTTGCTTATTTGATTTGGAGGTTACCTTA TAGTTTTTTAAATATTTTTCTATTTGGCAATGCATAGTGACTTATATTTCATGTCTCTTTCATTTGGAAAATGAATTGGT AAATCATTTGAGCCATCAATTAAGAGACAAATTAGTTTGTTGAAATAAGATAGTGAAGTGTATAGATAAAAAATACGCAT TTAAGGGTGTGCTGATAAGTACTACTAATTTTCCAGTTTCATGTTGTTTTATACTGCGTCTTGACTCTTGAGCCGTTGAG TATATTATGAGACCTTGAAAGAAACATTTTTTAAAAAAGAAAGAGTCGTTTGAATGTGAGAGCATGCTTGGGTCATCAGA CTTGTCTTACCTTATGGATTTTTCCAAAGTGGACAAGGAGAAACCATTTCTTTCTTTCTTTCTTTCTTTCTTTATCTGCA TGCTTTGAATATTTCTGAGAACTGTGGAAAGTCAAATATTCTGAACCATCTGTTCCCAATTCCCAATAGATAAACATGAA CTCGACCTTCAGAAGATGTGTAATTTTAATTTAAGGCCATATATTGCTTAAACATATTTATGTATTGTATAGAACTATAG ATCAATGTGATAGGAACATAGTTCATGTTGTAAGCATAGGAGTCATCACTTATCCTTAAAGGAAACTTAAGGGATGAAAT GACGTGAGTCAGTAATTCTATTGAGAATTGAGATCCTTTATATGTTTTATTTTTTTCTGGTTCTATTCTGCTTTGTGTCA TTTATCTTTGACTGAATTGTTTGTTTACATTGGGTGGTTTGAAATTTAGATAATCCTGTTGTGCTTTTTCCAATTCTCCT TAAGGTTGGCCTTCTGGAGATTCATTTAGCTCCAGTAGTATAGTTGTGATTGAAACTTGAACTGTTTTTGCAGATATTCA AATCCTGCTGGTCCAAGTGGCATCCCTGGAATGAATCTATTGTTTGTCAAGAAAATTGAGACTGAAGTTTGTGCTTATAT TTAATTTCATGGGCTGCTATTGTTCAACTTCAAAGAAATATAAAACACCAGGATATGAGGAGCCCACTGTTCTTGCTTCT GAGACACCTTGTGAGTATCCATCATCAAGTGGTAATTCTTGCAGCTGTGCTGTTGAATTTTATTTGGCATCTCCTAAGAA ACATCAAGCTCCTCTTGTTAACTATCTTTGTCACTACAATGCCATTCTGTTTGTGAATTTAGAAAATGAATGACTTAATA TGCTTATAACGTTTGCTAAATTTTTTTAATGTATGCTGTTCAGAATAAACTGCAAAGTTAAAACTTCAATTTCATATTAG CTGTCTCAATCCTTTCAGTTTACAATAATTATTGATAGTTGAATTTGACAAATGGTAATTTAATGAACTCTAGTCAAAAC TATAGGTATCAATGTATACAAATCGATCTGGTTTTTCTCCATGTACACAGTTAATATGTAATCAAAACACAGTTGCATTT GCATTTTGCATAGGATGCTTTCCTTACTCTAGGAAACTCTAATTAGTGTAAGAAAAGAAAGAAAACATACTTCAAAAACA CGTGTTTGTTAATCACAAATTTTCGAGTTACAGATATGTATATTCCCTTTTAGAATCCATGTAAACAATCACTCACACAC ACGAACCACTTGGAGCAAGAGAAAATTGTTACTTCATAATGTTGAATTGAAGTTTAAGCTATATTAAACACTAACACCAC GTATACATTTCTCTCTTTCTATCTAATATATTTTCGACAGTCATTTCAAACATCTGAAAGTTCCTATCGTAGTACTGATG AGTGATGACTATTATATTTTGGTTTTTCATTCCAAATGCAAAGCATTTAGTTTCATTCAACACAAAATCATGATTTCTCA TTCTCGAGTACAATGTCAAGTTTCAAAACTTAATAAAAGAAGTTCTCTCTTTTTTCTCAGTTTCTGTGAGTGAAGTAGAG GCATTATATGAACTCTATATGAAGGTCAGCAACTCAGTTATTGAAGATGGTCTTATTCACAAGGTGAATTAGGAATTTTT TAAGATTATAGTGTAGATGGGATTTCCATACTATTGCATAAGTTACTTATTGGTCATCTTTACATCCAGGAAGAATTCCA GCTGGCACTTTTCAGGAATAAAAATGAGAGAAGTCTGTTCGCAGACAGGGTATGTAAATCCGACCTATGCCCTATAGCTT AAGATTCTTTGATCTTGTTCAAGTTCTTAAGATACTTTCAGTGAAAGTATTTTATCTGTGACTTGTTATCTTGTTATACA TTGACAGTCATGTCACCTCTCTTGAGTCTTAACATGCCTGGCACCCTACTGTAATGCTTATCCATATTCATATTCATTTC TTCTTCTTTATAGATTTTTGACTTATTTGATGTCAAGCGCAATGGTGTCATTGAGTTCGGGGAATTTGTTCGATCATTGG GTGTTTTTCATCCAGATGCAGCTTTAGAAGACAAGATTGCATGTAAGATTGATCTCCAAATTTTTGTTTCCGGTTTCATT AATTGTTTGGTCACGCATAGATACTGTATCTTCTAACTGGAAATAAAATTTTGCAGTTGCTTTTCGGTTGTATGATCTGA GACAGACAGGGTATATTGAAAGAGAGGAGGTACTTTTTTTTCTCATTTCCCCATCGAATTACGAATAATTGCTCCTTTAT TAGTTTCAACCTTTAAAGTATGCTCTCTTGAGTGGTCTATCTGCAGTTAAAGGAGATGGTATTGGCACTTCTGCACGAAT CAGATCTTGTACTTTCAGATGATATGATAGAAATGATTGTGGATAAGGTTCTTAAAATTTTACCTTATATTATTACTTTC AAGAGATCCTTAAAATTATTGTTCCTTAAGTTGTAAACCTTCTTCCTCAGACTTTTGATGATGCTGATACAAAAAGTGAC GGAAGGATCGATCAAGATGAGTGGAAAGCATTTGTGTCTAAACATCCATCATTGATAAAGAACATGACTCTACCATATCT GAAGTCAGTATATACATTCTCCATGAAGCATTCATTTCAGTAATTGGAATTTTAGAAAACAAAGCATTTCCAAGTTTTGA TACTAAACTCTTATGTTCATGTCTGTCTTGCAGGGATGTTTCCTTAGCATTTCCAAGTTTTGTGGTAAGAACAGAAGTTG AAGACTCAGAGCTGTGACTTTGGAAGGTTTTTGGCATCACCAAGGATGTTGTTATCTTTGATTCCATCTCCTGATACCAT TGCTGCCAAGAAAAGACCATTCCTAAGGTGCCAGAGACAAGGAATGAAGGATAATGATCCATAGTACAATTTTATCTGGT TCCATATCAGAGCAAAGAGCTTCTAGACTTGCAAACGGCAATCTATAAGTGAGCTCTTTTCTAGTAGCTAAACATATACT GAAAGTGTTATATAAGGCTACAAATTATTCAGTTGGATAGGTTGTACATTTATGTATATATAAATTATGAGAGCTGCAAA GAGAGTAGCAGATCATGTAACTAGGCCATCTAGCAAATTGAATAAACATTAGCATGATTACTATTTACTAATAACATG
CDS sequence (LotjaGi1g1v0285500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTGCTATTGTTCAACTTCAAAGAAATATAAAACACCAGGATATGAGGAGCCCACTGTTCTTGCTTCTGAGACACC TTGTGAGTATCCATCATCAAGTGTTTCTGTGAGTGAAGTAGAGGCATTATATGAACTCTATATGAAGGTCAGCAACTCAG TTATTGAAGATGGTCTTATTCACAAGGAAGAATTCCAGCTGGCACTTTTCAGGAATAAAAATGAGAGAAGTCTGTTCGCA GACAGGATTTTTGACTTATTTGATGTCAAGCGCAATGGTGTCATTGAGTTCGGGGAATTTGTTCGATCATTGGGTGTTTT TCATCCAGATGCAGCTTTAGAAGACAAGATTGCATTTGCTTTTCGGTTGTATGATCTGAGACAGACAGGGTATATTGAAA GAGAGGAGTTAAAGGAGATGGTATTGGCACTTCTGCACGAATCAGATCTTGTACTTTCAGATGATATGATAGAAATGATT GTGGATAAGACTTTTGATGATGCTGATACAAAAAGTGACGGAAGGATCGATCAAGATGAGTGGAAAGCATTTGTGTCTAA ACATCCATCATTGATAAAGAACATGACTCTACCATATCTGAAGGATGTTTCCTTAGCATTTCCAAGTTTTGTGGTAAGAA CAGAAGTTGAAGACTCAGAGCTGTGA
Protein sequence (LotjaGi1g1v0285500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCYCSTSKKYKTPGYEEPTVLASETPCEYPSSSVSVSEVEALYELYMKVSNSVIEDGLIHKEEFQLALFRNKNERSLFA DRIFDLFDVKRNGVIEFGEFVRSLGVFHPDAALEDKIAFAFRLYDLRQTGYIEREELKEMVLALLHESDLVLSDDMIEMI VDKTFDDADTKSDGRIDQDEWKAFVSKHPSLIKNMTLPYLKDVSLAFPSFVVRTEVEDSEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 221 | 221 | 3.2E-123 | – | |
| PANTHER | 1 | 221 | 221 | 3.2E-123 | – | |
| Gene3D | 31 | 219 | 189 | 6.2E-60 | – | |
| SUPERFAMILY | 34 | 207 | 174 | 5.23E-41 | ||
| ProSiteProfiles | 75 | 110 | 36 | 11.222 | ||
| SMART | 79 | 107 | 29 | 6.7 | ||
| PRINTS | 83 | 104 | 22 | 1.9E-7 | – | |
| ProSiteProfiles | 112 | 147 | 36 | 12.114 | ||
| Pfam | 115 | 185 | 71 | 7.0E-10 | ||
| SMART | 116 | 144 | 29 | 1.5 | ||
| CDD | 116 | 186 | 71 | 2.24818E-8 | ||
| PRINTS | 130 | 148 | 19 | 1.9E-7 | – | |
| ProSiteProfiles | 156 | 191 | 36 | 10.971 | ||
| SMART | 160 | 188 | 29 | 0.21 | ||
| PRINTS | 176 | 196 | 21 | 1.9E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi1g1v0285500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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