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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0286800 |
| Transcript ID | LotjaGi1g1v0286800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT3G49260.1 IQ-domain 21; Swiss-Prot: sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1; TrEMBL-Plants: tr|A0A151RZV4|A0A151RZV4_CAJCA Protein IQ-DOMAIN 1; Found in the gene: LotjaGi1g1v0286800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69656017..69661521) extracted from Lotus japonicus Gifu genome v1.2.
GCCTAGTCTAAAAGCTAAAAAAGAAAACTAGATAGTTCTCTAATGTATGTTCAACCAATCAAATTGAGTTGTATATAAAT CAATCTCCTATTTGGATTCTCTATAAGGCTTGAGCCACCTACCGGATTACAGTTACTTATAATTAATCTCTCTCTTTTCC TCTCTCACACACACGCCCACATACACAGGCGCTCTGTGACTGCATCCTTCCTCACTACCCCTCTCCCTCTTTCTCTCTGC ATTGTGCACATCACAATTTCGCAACTTTCGGAAGACTGTCCCAAATGATGACCAAACATTACCAATTTCCCATGAATCTA AAAACATGCATCAATCAACACGTAGTACAGGCCCAACCCAACTGATTTCCCCACATTCACCTCGGTGTTAGTTAACACTT ACCAGGTTTGTTAATCACAACTCAGTTTCTTGTCTCTCTGTTGAATGTGATATAATAAATGGTCATTACAATATAAAATT CTAAGGTTCAATTCTGACATATATGATGTCTGTCTCTGTCTCTATCTCTGAATTGTTGATGCGTGCATGTAATGATGGTG GTGGCCGCCGCGGTTGTAAGCAGCAGAAGCAGAAGATCGTTTCCTCTCAGATGGGGAAGAAAGGGTGGTTCTCGTCGGTG AAGAAGAAAGTTTTCAAGTCATCATCTTCTAAGGACTCGCCTCAGGAGAAGGTGATTCATCTCCATTCCCCTGTTCTTCA TGAATTTTTTGCTGAATTGTTCTGTTTTACAAGTTTTTTTTAATATGTTAGGCTAATCAATGCTTTTTCTTTCTTCCCAT TCAGCTAAATTGGTTGGCTAAATTAATTAGGATTTCCCATTTTGGTTTTAGTTCCAAAAGCAAAATCAAATGTTCATTAT TTTCTTGGCTTAGGTCCCCCACTTTTTTTTATGCAGTGAAAATATTCCCCTCCTATCAATAAAATTTTGTGTTATGAATT AAGAAATTGTCAGTGAAGCAGTTAAAAAATTTAATTTTTAATTGACATAGTAAAATTTCATTGATGCAGCTGAGTAATAA GACATAATTGCATGTTTTGATATGCAGTGAAAAATCATAATGAAACTAAAATGATGGTGAATAGTCATAAGAGCTAAGAG AAGTTGTTTCAGTATATAGTGACTTCACTGTAATTTTACATTATCTATTGAAACATGCAGTGAAGATTTTGATTTTGTTA TGTTCTTTGACTCATGTACTTACCAAGTAAACACTCATTTTCAGTTACTAAAAAGAATTATGACAGTGTATAAAGATTCA CATATTTTAAATATGATTGGTTTACAATGTAAAAAAAAATTCAGTCGTGAGTGCATGTAATTTTTCTTGATAAATAAAAA TTTGAAACATCAGTTTATTTTTATTCCTTCAAATGATAACTTTTGACATCGAAATGGTCTAAACATCATTGTTTATGGAG ACCAAAATGATGTCCTCCGATAACAAAAAATACCATTTCAAGAATAACTCAAGTGTTATAATCTTCCTATTTCTATGGCA AGTCATTAACAAAGCATTATGCCATTTATGAACGTTTCAAATCAAAGTTCTTGAAATAGTCACGAGAGGCATGACCTTCT TTTCCTTTATCCCAAAGAAACCAAGAGAGATCACATAAATTGCTTAAAATGAAGCATGAGTATTAATGTTTTCATCGCAT TCTACCTTACACATTAAAGGCTAACAATATCTCCTTGGTAAGTACGGCAAGTCAACTTGTTAATTACTGTAGTTGTAGTT GTTGTCTTATATGCATCCACATAATAAAGGATGAGCAACCTGGCCCTTTGGACCAATGGACCATCAACCCAATGCATCAA GCAATTATGTGTGTTCATGGTCCCCTATCATGTGAGCATGCATCACATAGTTTCACTTGCATTTCTGTCACATTGTTATC ATACAACCTAACGCATCACATCATTCATCTTGATCATCATGTGATTCCAATGTTAGATCTCCATCATGCTAAACAAAGCA TATCTTGTTTTTATTTTTTAAAGAGCACTAAAAAGGTAGAGTTTTAGACTTATAATACTATTTTGTGTATGTTTTGATAC TAATTATTAATTAATGTGAAAGCATTATTTCGATCGATAAAGAATTTCGTGACATGTTTACCTTAAAGTGAGTGTTAACA TCTATTAATATTGACTCGACGAGTATTCAAAAGAGACCTTTAGATTTTTGCAAATTACAAAAGTTAACTTTAGAAGATCA TATGGTATAAGACAAATATATGTGGGGTTCAAATCACAAGGGTATAGAAACCGCTCTACTTCAACAGGTTTGGAAGAAAA ATCGTGCTTTTTAATCTTAGAATTTAAATTAAGCCTAATTCTATAAAAAAAAAAATAGGGTAAAATTATGGGTAATCAAA ATTCTAAGATAATATTATAGTTTATTTTAGATTCATTCATTCAATTGAGACGAACATAAATGTCTAACGTTTGTTCTATA TATGAGTCACTCATAATCTTTATTTATGCAATTTCTATGTTTTAAATGTCTAACTTTTAGCATGAGAGATTGTCTTGAAA AATTCCACATTGATTAGAAATATAACACGATAAGTGCTCTCATCCCTAAACGATTTTGGAGTAGGGTCAGGGTCTAAGCC TAAATTCTAAAAATTGATTCTGTAATTTTCCAATTGATTGCTAGGTAATTTAGCAATTGACCAATGTTGGTGTTTTTACT TTCAGAGGGAAAATGAAGGGAAAGGGCAGCATGAAGAGCCAGAGGTGGTATCTTTTGAGCATTTTCCTACAGATAGTTCA CCAGATATCACCAATGATCAGAGGAGTGTCGCATCCGTGCCGGTGACTGAAGATAAAAATCATGCCATTGCCTTTGCAGC CGGCACCTCAGCGGCGGTGGCGGCTGCTCAAAAAGCCGCTAGAGTTGTAAGATTGGCTGGGCGTGGACGCTACTCTAAGG AACAAATGGCAGCAACACTCATTCAATCACAGTACAGAGGATACCTTGTAAGACCTCCTTTTTGTTTGTTTTGGTAAAGT TGTTGTTCATTGTTGTTATCAGAATTCAGTAGTTTGGTAAGGGCCATAAATATGCCACCCACTCTCAAAGTTTTCTAATT ACATGAATTAATAATAACTCATGAATAACACTTGCAGCAGTATACACGATACACCTCCAAACATAAAGTTCATATTGGTT TATTTATTACATGAGCAATGCTAGCGGTTACAAATCATTCCAAAATGAGAACTAGATGAAATCATGGATCACAGCCGTTG CTTTAGTTTTTTTTTTTAAATAAAAAAAAAAACTGCACAATCACATTAGGACATATATGTATGAAATTAGATATTTGTAT TCAGAATATGCAGATTAGTCCATGACTGCTATCCTCAAATGATGTTCCAGTTTTGCCATCAATGAAATATTATCATGTCA GCTAAAAAGACATGACTTAACTTAGTCGGTTACAAAATTACCTGATACTAACTTTTAATTGAGGTGTAAGATTTTAATTT ATCCAGAAGACAAATGAAAGGGGTTTGGGCTATTAATACTTGTAAGTACAATAGTGTCCCAAGAAACGAACAAGTTAATG ACTTCATCATTTGGTGGGGTTTGTTTGTGCTGACCCATCATTCATTATTAGTTTGCATAATTGATCTCTATTTTCTAACA TAGCTATGAGTCTTTGACAATCCATTGTAAGCTTAGTTAGTTATGTTACAATTATGTATGAGTTTGAATGAAATTAATTA TTGCTACCGAAGTTAGGCCAATTTGATGTTGCTACCCATGATAGGCACATTGATGTGTCTTTCAATCGTGTATCCAAACA GGCTCGACGTGCACTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCACTTGTCAGAGGACATCATGTAAGGAAACAAG CGCAGATGACAATGCGCTGCATGCAAGCATTGGTCCGAGTTCAGGGAAGAGTAAGAGCTCGCAGACTCCAATTGACTCAC CAGAGGCTTCAGGGACATGACAGAAAAGAACAAGAGCCTAAGTTTAAGAGCCCCATGAACATTAAGGGAAATAATTATGA ACATTTGAGGAAACATGAAGCTACAATGAAGAAGGAAAGAGCTCTTGCATTAGCTTTCAACTTCCAGGTTACTTTTTTTT TTTCTCCTTTTAATTAACATTTTTTTCAGATATAAAATCATTTATAAAGAGAGGCAAGCTATGCATCTAGAAATTCAGCT CGTGGGCCGAAAAATTATTTTGTGAAGAAAAATTTAGAGTGAGAGGATGTCTGAGTCAAGGAACCTTTTCAGTACATACA ATAACCTTACATTTACTTCACCTTGAGAGGTCGAGTGAAGACTCAAAGCTGCAATCTGTTAGATATGAGACTAGTTGAAA CTCGACTTTATCATGCTTCACAACCCACTGAAGGGATCGTGGGCCAACATATATACATAAACATATAATATTAAAGTATA TATATTTTTATAGGAGAAATTGAGGAAAATTAATACACATCATATGTATATAACGATAGGAATTTTTTTGTGTGGGGGCA AATTGAAATTCATTATTCATCTTCATTGCTAATTAATATGTTTATGTTGCAGCAACAACAGAATCAATATTTGCAAATAG ACCCAACTACTGGTGATGATATTGAAAGATGTAGCAATGAGCGTGAAAAAGCCCAATTGGATTGGAACCGGTTGGAACGT TGGATGTCATCGTCACAATCACATGTTAGGCAACGAGAGAACCCATACATGACTCTTGCTACCACAGCAACCAGCACCAC AACCACAGACAACATGTCTGAAGAGAAAACACTTGAAATCGACATGGTTCTCCCAAGAGGCTCAATTCACACCAACATGG GCCTGACAGACCAAGACTTTCTTGTTTCAAGCCCAACCTCGAATTGGCACTACCACAGGCAGCAGAGTGGAGGTGTGGTG CCTAGCTATATGGCCCCAACACAGTCTGCAAGGGCCAAGGTTCGTCGGAGTCAAGGCCCGTTTAAGCAACGGGCTTTTGC TGGGCCTCAATGGAACTCGTCGACGAGGACTTATGCTGCTGGGCCGGGTTGTGACTCGTCCAGCTCTGGTGGGACCACCG CGGCTCATCAGTTTTCAAGGAGCCCAAGCCCGAAAATTAATGGGATTCGCCTCCAATCTAGACGGATTTTAGGTGGTAGC CCATACAATGTTGGCACTGAGGACTGGATCAGCCCACTTCGAGCCCAGGGTTGGATGTGATTAGATTAATAATTAATTTT TCTAAGCTTGATGATTGATAATTATAATGGCATGTTAGGTGAGGTCTGAACTTTTGACATGCATTTGTATTTACTATTAT TTAAAGGCAGTTCAATAATGTGGATGTACGTAATGAACCAAAAGGCCTCTGAGAGATTGTATAACCCTCCTTATAACAAT CTTTGGATGTGGGTGTAATGAACAAGATTGTATATTTAAATTTGCAATTCAATATTGTGCTTTTA
CDS sequence (LotjaGi1g1v0286800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCTGTCTCTGTCTCTATCTCTGAATTGTTGATGCGTGCATGTAATGATGGTGGTGGCCGCCGCGGTTGTAAGCA GCAGAAGCAGAAGATCGTTTCCTCTCAGATGGGGAAGAAAGGGTGGTTCTCGTCGGTGAAGAAGAAAGTTTTCAAGTCAT CATCTTCTAAGGACTCGCCTCAGGAGAAGAGGGAAAATGAAGGGAAAGGGCAGCATGAAGAGCCAGAGGTGGTATCTTTT GAGCATTTTCCTACAGATAGTTCACCAGATATCACCAATGATCAGAGGAGTGTCGCATCCGTGCCGGTGACTGAAGATAA AAATCATGCCATTGCCTTTGCAGCCGGCACCTCAGCGGCGGTGGCGGCTGCTCAAAAAGCCGCTAGAGTTGTAAGATTGG CTGGGCGTGGACGCTACTCTAAGGAACAAATGGCAGCAACACTCATTCAATCACAGTACAGAGGATACCTTGCTCGACGT GCACTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCACTTGTCAGAGGACATCATGTAAGGAAACAAGCGCAGATGAC AATGCGCTGCATGCAAGCATTGGTCCGAGTTCAGGGAAGAGTAAGAGCTCGCAGACTCCAATTGACTCACCAGAGGCTTC AGGGACATGACAGAAAAGAACAAGAGCCTAAGTTTAAGAGCCCCATGAACATTAAGGGAAATAATTATGAACATTTGAGG AAACATGAAGCTACAATGAAGAAGGAAAGAGCTCTTGCATTAGCTTTCAACTTCCAGCAACAACAGAATCAATATTTGCA AATAGACCCAACTACTGGTGATGATATTGAAAGATGTAGCAATGAGCGTGAAAAAGCCCAATTGGATTGGAACCGGTTGG AACGTTGGATGTCATCGTCACAATCACATGTTAGGCAACGAGAGAACCCATACATGACTCTTGCTACCACAGCAACCAGC ACCACAACCACAGACAACATGTCTGAAGAGAAAACACTTGAAATCGACATGGTTCTCCCAAGAGGCTCAATTCACACCAA CATGGGCCTGACAGACCAAGACTTTCTTGTTTCAAGCCCAACCTCGAATTGGCACTACCACAGGCAGCAGAGTGGAGGTG TGGTGCCTAGCTATATGGCCCCAACACAGTCTGCAAGGGCCAAGGTTCGTCGGAGTCAAGGCCCGTTTAAGCAACGGGCT TTTGCTGGGCCTCAATGGAACTCGTCGACGAGGACTTATGCTGCTGGGCCGGGTTGTGACTCGTCCAGCTCTGGTGGGAC CACCGCGGCTCATCAGTTTTCAAGGAGCCCAAGCCCGAAAATTAATGGGATTCGCCTCCAATCTAGACGGATTTTAGGTG GTAGCCCATACAATGTTGGCACTGAGGACTGGATCAGCCCACTTCGAGCCCAGGGTTGGATGTGA
Protein sequence (LotjaGi1g1v0286800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSVSVSISELLMRACNDGGGRRGCKQQKQKIVSSQMGKKGWFSSVKKKVFKSSSSKDSPQEKRENEGKGQHEEPEVVSF EHFPTDSSPDITNDQRSVASVPVTEDKNHAIAFAAGTSAAVAAAQKAARVVRLAGRGRYSKEQMAATLIQSQYRGYLARR ALRALKGLVRLQALVRGHHVRKQAQMTMRCMQALVRVQGRVRARRLQLTHQRLQGHDRKEQEPKFKSPMNIKGNNYEHLR KHEATMKKERALALAFNFQQQQNQYLQIDPTTGDDIERCSNEREKAQLDWNRLERWMSSSQSHVRQRENPYMTLATTATS TTTTDNMSEEKTLEIDMVLPRGSIHTNMGLTDQDFLVSSPTSNWHYHRQQSGGVVPSYMAPTQSARAKVRRSQGPFKQRA FAGPQWNSSTRTYAAGPGCDSSSSGGTTAAHQFSRSPSPKINGIRLQSRRILGGSPYNVGTEDWISPLRAQGWM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 18 | 94 | 77 | - | – | |
| PANTHER | 37 | 473 | 437 | 1.0E-162 | – | |
| PANTHER | 37 | 473 | 437 | 1.0E-162 | – | |
| MobiDBLite | 51 | 80 | 30 | - | – | |
| Gene3D | 140 | 195 | 56 | 2.0E-5 | – | |
| SMART | 141 | 163 | 23 | 5.7E-5 | ||
| ProSiteProfiles | 142 | 170 | 29 | 9.908 | ||
| Pfam | 144 | 163 | 20 | 8.0E-6 | ||
| SMART | 164 | 185 | 22 | 58.0 | ||
| ProSiteProfiles | 166 | 193 | 28 | 8.663 | ||
| Pfam | 169 | 184 | 16 | 0.18 | ||
| MobiDBLite | 212 | 226 | 15 | - | – | |
| MobiDBLite | 212 | 232 | 21 | - | – | |
| Pfam | 359 | 401 | 43 | 1.4E-5 | ||
| MobiDBLite | 390 | 442 | 53 | - | – | |
| MobiDBLite | 402 | 442 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0286800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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