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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0286800 |
| Transcript ID | LotjaGi1g1v0286800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT3G49260.1 IQ-domain 21; Swiss-Prot: sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1; TrEMBL-Plants: tr|A0A151RZV4|A0A151RZV4_CAJCA Protein IQ-DOMAIN 1; Found in the gene: LotjaGi1g1v0286800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69656017..69661521) extracted from Lotus japonicus Gifu genome v1.2.
GCCTAGTCTAAAAGCTAAAAAAGAAAACTAGATAGTTCTCTAATGTATGTTCAACCAATCAAATTGAGTTGTATATAAAT CAATCTCCTATTTGGATTCTCTATAAGGCTTGAGCCACCTACCGGATTACAGTTACTTATAATTAATCTCTCTCTTTTCC TCTCTCACACACACGCCCACATACACAGGCGCTCTGTGACTGCATCCTTCCTCACTACCCCTCTCCCTCTTTCTCTCTGC ATTGTGCACATCACAATTTCGCAACTTTCGGAAGACTGTCCCAAATGATGACCAAACATTACCAATTTCCCATGAATCTA AAAACATGCATCAATCAACACGTAGTACAGGCCCAACCCAACTGATTTCCCCACATTCACCTCGGTGTTAGTTAACACTT ACCAGGTTTGTTAATCACAACTCAGTTTCTTGTCTCTCTGTTGAATGTGATATAATAAATGGTCATTACAATATAAAATT CTAAGGTTCAATTCTGACATATATGATGTCTGTCTCTGTCTCTATCTCTGAATTGTTGATGCGTGCATGTAATGATGGTG GTGGCCGCCGCGGTTGTAAGCAGCAGAAGCAGAAGATCGTTTCCTCTCAGATGGGGAAGAAAGGGTGGTTCTCGTCGGTG AAGAAGAAAGTTTTCAAGTCATCATCTTCTAAGGACTCGCCTCAGGAGAAGGTGATTCATCTCCATTCCCCTGTTCTTCA TGAATTTTTTGCTGAATTGTTCTGTTTTACAAGTTTTTTTTAATATGTTAGGCTAATCAATGCTTTTTCTTTCTTCCCAT TCAGCTAAATTGGTTGGCTAAATTAATTAGGATTTCCCATTTTGGTTTTAGTTCCAAAAGCAAAATCAAATGTTCATTAT TTTCTTGGCTTAGGTCCCCCACTTTTTTTTATGCAGTGAAAATATTCCCCTCCTATCAATAAAATTTTGTGTTATGAATT AAGAAATTGTCAGTGAAGCAGTTAAAAAATTTAATTTTTAATTGACATAGTAAAATTTCATTGATGCAGCTGAGTAATAA GACATAATTGCATGTTTTGATATGCAGTGAAAAATCATAATGAAACTAAAATGATGGTGAATAGTCATAAGAGCTAAGAG AAGTTGTTTCAGTATATAGTGACTTCACTGTAATTTTACATTATCTATTGAAACATGCAGTGAAGATTTTGATTTTGTTA TGTTCTTTGACTCATGTACTTACCAAGTAAACACTCATTTTCAGTTACTAAAAAGAATTATGACAGTGTATAAAGATTCA CATATTTTAAATATGATTGGTTTACAATGTAAAAAAAAATTCAGTCGTGAGTGCATGTAATTTTTCTTGATAAATAAAAA TTTGAAACATCAGTTTATTTTTATTCCTTCAAATGATAACTTTTGACATCGAAATGGTCTAAACATCATTGTTTATGGAG ACCAAAATGATGTCCTCCGATAACAAAAAATACCATTTCAAGAATAACTCAAGTGTTATAATCTTCCTATTTCTATGGCA AGTCATTAACAAAGCATTATGCCATTTATGAACGTTTCAAATCAAAGTTCTTGAAATAGTCACGAGAGGCATGACCTTCT TTTCCTTTATCCCAAAGAAACCAAGAGAGATCACATAAATTGCTTAAAATGAAGCATGAGTATTAATGTTTTCATCGCAT TCTACCTTACACATTAAAGGCTAACAATATCTCCTTGGTAAGTACGGCAAGTCAACTTGTTAATTACTGTAGTTGTAGTT GTTGTCTTATATGCATCCACATAATAAAGGATGAGCAACCTGGCCCTTTGGACCAATGGACCATCAACCCAATGCATCAA GCAATTATGTGTGTTCATGGTCCCCTATCATGTGAGCATGCATCACATAGTTTCACTTGCATTTCTGTCACATTGTTATC ATACAACCTAACGCATCACATCATTCATCTTGATCATCATGTGATTCCAATGTTAGATCTCCATCATGCTAAACAAAGCA TATCTTGTTTTTATTTTTTAAAGAGCACTAAAAAGGTAGAGTTTTAGACTTATAATACTATTTTGTGTATGTTTTGATAC TAATTATTAATTAATGTGAAAGCATTATTTCGATCGATAAAGAATTTCGTGACATGTTTACCTTAAAGTGAGTGTTAACA TCTATTAATATTGACTCGACGAGTATTCAAAAGAGACCTTTAGATTTTTGCAAATTACAAAAGTTAACTTTAGAAGATCA TATGGTATAAGACAAATATATGTGGGGTTCAAATCACAAGGGTATAGAAACCGCTCTACTTCAACAGGTTTGGAAGAAAA ATCGTGCTTTTTAATCTTAGAATTTAAATTAAGCCTAATTCTATAAAAAAAAAAATAGGGTAAAATTATGGGTAATCAAA ATTCTAAGATAATATTATAGTTTATTTTAGATTCATTCATTCAATTGAGACGAACATAAATGTCTAACGTTTGTTCTATA TATGAGTCACTCATAATCTTTATTTATGCAATTTCTATGTTTTAAATGTCTAACTTTTAGCATGAGAGATTGTCTTGAAA AATTCCACATTGATTAGAAATATAACACGATAAGTGCTCTCATCCCTAAACGATTTTGGAGTAGGGTCAGGGTCTAAGCC TAAATTCTAAAAATTGATTCTGTAATTTTCCAATTGATTGCTAGGTAATTTAGCAATTGACCAATGTTGGTGTTTTTACT TTCAGAGGGAAAATGAAGGGAAAGGGCAGCATGAAGAGCCAGAGGTGGTATCTTTTGAGCATTTTCCTACAGATAGTTCA CCAGATATCACCAATGATCAGAGGAGTGTCGCATCCGTGCCGGTGACTGAAGATAAAAATCATGCCATTGCCTTTGCAGC CGGCACCTCAGCGGCGGTGGCGGCTGCTCAAAAAGCCGCTAGAGTTGTAAGATTGGCTGGGCGTGGACGCTACTCTAAGG AACAAATGGCAGCAACACTCATTCAATCACAGTACAGAGGATACCTTGTAAGACCTCCTTTTTGTTTGTTTTGGTAAAGT TGTTGTTCATTGTTGTTATCAGAATTCAGTAGTTTGGTAAGGGCCATAAATATGCCACCCACTCTCAAAGTTTTCTAATT ACATGAATTAATAATAACTCATGAATAACACTTGCAGCAGTATACACGATACACCTCCAAACATAAAGTTCATATTGGTT TATTTATTACATGAGCAATGCTAGCGGTTACAAATCATTCCAAAATGAGAACTAGATGAAATCATGGATCACAGCCGTTG CTTTAGTTTTTTTTTTTAAATAAAAAAAAAAACTGCACAATCACATTAGGACATATATGTATGAAATTAGATATTTGTAT TCAGAATATGCAGATTAGTCCATGACTGCTATCCTCAAATGATGTTCCAGTTTTGCCATCAATGAAATATTATCATGTCA GCTAAAAAGACATGACTTAACTTAGTCGGTTACAAAATTACCTGATACTAACTTTTAATTGAGGTGTAAGATTTTAATTT ATCCAGAAGACAAATGAAAGGGGTTTGGGCTATTAATACTTGTAAGTACAATAGTGTCCCAAGAAACGAACAAGTTAATG ACTTCATCATTTGGTGGGGTTTGTTTGTGCTGACCCATCATTCATTATTAGTTTGCATAATTGATCTCTATTTTCTAACA TAGCTATGAGTCTTTGACAATCCATTGTAAGCTTAGTTAGTTATGTTACAATTATGTATGAGTTTGAATGAAATTAATTA TTGCTACCGAAGTTAGGCCAATTTGATGTTGCTACCCATGATAGGCACATTGATGTGTCTTTCAATCGTGTATCCAAACA GGCTCGACGTGCACTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCACTTGTCAGAGGACATCATGTAAGGAAACAAG CGCAGATGACAATGCGCTGCATGCAAGCATTGGTCCGAGTTCAGGGAAGAGTAAGAGCTCGCAGACTCCAATTGACTCAC CAGAGGCTTCAGGGACATGACAGAAAAGAACAAGAGCCTAAGTTTAAGAGCCCCATGAACATTAAGGGAAATAATTATGA ACATTTGAGGAAACATGAAGCTACAATGAAGAAGGAAAGAGCTCTTGCATTAGCTTTCAACTTCCAGGTTACTTTTTTTT TTTCTCCTTTTAATTAACATTTTTTTCAGATATAAAATCATTTATAAAGAGAGGCAAGCTATGCATCTAGAAATTCAGCT CGTGGGCCGAAAAATTATTTTGTGAAGAAAAATTTAGAGTGAGAGGATGTCTGAGTCAAGGAACCTTTTCAGTACATACA ATAACCTTACATTTACTTCACCTTGAGAGGTCGAGTGAAGACTCAAAGCTGCAATCTGTTAGATATGAGACTAGTTGAAA CTCGACTTTATCATGCTTCACAACCCACTGAAGGGATCGTGGGCCAACATATATACATAAACATATAATATTAAAGTATA TATATTTTTATAGGAGAAATTGAGGAAAATTAATACACATCATATGTATATAACGATAGGAATTTTTTTGTGTGGGGGCA AATTGAAATTCATTATTCATCTTCATTGCTAATTAATATGTTTATGTTGCAGCAACAACAGAATCAATATTTGCAAATAG ACCCAACTACTGGTGATGATATTGAAAGATGTAGCAATGAGCGTGAAAAAGCCCAATTGGATTGGAACCGGTTGGAACGT TGGATGTCATCGTCACAATCACATGTTAGGCAACGAGAGAACCCATACATGACTCTTGCTACCACAGCAACCAGCACCAC AACCACAGACAACATGTCTGAAGAGAAAACACTTGAAATCGACATGGTTCTCCCAAGAGGCTCAATTCACACCAACATGG GCCTGACAGACCAAGACTTTCTTGTTTCAAGCCCAACCTCGAATTGGCACTACCACAGGCAGCAGAGTGGAGGTGTGGTG CCTAGCTATATGGCCCCAACACAGTCTGCAAGGGCCAAGGTTCGTCGGAGTCAAGGCCCGTTTAAGCAACGGGCTTTTGC TGGGCCTCAATGGAACTCGTCGACGAGGACTTATGCTGCTGGGCCGGGTTGTGACTCGTCCAGCTCTGGTGGGACCACCG CGGCTCATCAGTTTTCAAGGAGCCCAAGCCCGAAAATTAATGGGATTCGCCTCCAATCTAGACGGATTTTAGGTGGTAGC CCATACAATGTTGGCACTGAGGACTGGATCAGCCCACTTCGAGCCCAGGGTTGGATGTGATTAGATTAATAATTAATTTT TCTAAGCTTGATGATTGATAATTATAATGGCATGTTAGGTGAGGTCTGAACTTTTGACATGCATTTGTATTTACTATTAT TTAAAGGCAGTTCAATAATGTGGATGTACGTAATGAACCAAAAGGCCTCTGAGAGATTGTATAACCCTCCTTATAACAAT CTTTGGATGTGGGTGTAATGAACAAGATTGTATATTTAAATTTGCAATTCAATATTGTGCTTTTA
CDS sequence (LotjaGi1g1v0286800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAGAAAGGGTGGTTCTCGTCGGTGAAGAAGAAAGTTTTCAAGTCATCATCTTCTAAGGACTCGCCTCAGGAGAA GAGGGAAAATGAAGGGAAAGGGCAGCATGAAGAGCCAGAGGTGGTATCTTTTGAGCATTTTCCTACAGATAGTTCACCAG ATATCACCAATGATCAGAGGAGTGTCGCATCCGTGCCGGTGACTGAAGATAAAAATCATGCCATTGCCTTTGCAGCCGGC ACCTCAGCGGCGGTGGCGGCTGCTCAAAAAGCCGCTAGAGTTGTAAGATTGGCTGGGCGTGGACGCTACTCTAAGGAACA AATGGCAGCAACACTCATTCAATCACAGTACAGAGGATACCTTGCTCGACGTGCACTGCGTGCTTTGAAGGGATTGGTGA GGCTGCAAGCACTTGTCAGAGGACATCATGTAAGGAAACAAGCGCAGATGACAATGCGCTGCATGCAAGCATTGGTCCGA GTTCAGGGAAGAGTAAGAGCTCGCAGACTCCAATTGACTCACCAGAGGCTTCAGGGACATGACAGAAAAGAACAAGAGCC TAAGTTTAAGAGCCCCATGAACATTAAGGGAAATAATTATGAACATTTGAGGAAACATGAAGCTACAATGAAGAAGGAAA GAGCTCTTGCATTAGCTTTCAACTTCCAGCAACAACAGAATCAATATTTGCAAATAGACCCAACTACTGGTGATGATATT GAAAGATGTAGCAATGAGCGTGAAAAAGCCCAATTGGATTGGAACCGGTTGGAACGTTGGATGTCATCGTCACAATCACA TGTTAGGCAACGAGAGAACCCATACATGACTCTTGCTACCACAGCAACCAGCACCACAACCACAGACAACATGTCTGAAG AGAAAACACTTGAAATCGACATGGTTCTCCCAAGAGGCTCAATTCACACCAACATGGGCCTGACAGACCAAGACTTTCTT GTTTCAAGCCCAACCTCGAATTGGCACTACCACAGGCAGCAGAGTGGAGGTGTGGTGCCTAGCTATATGGCCCCAACACA GTCTGCAAGGGCCAAGGTTCGTCGGAGTCAAGGCCCGTTTAAGCAACGGGCTTTTGCTGGGCCTCAATGGAACTCGTCGA CGAGGACTTATGCTGCTGGGCCGGGTTGTGACTCGTCCAGCTCTGGTGGGACCACCGCGGCTCATCAGTTTTCAAGGAGC CCAAGCCCGAAAATTAATGGGATTCGCCTCCAATCTAGACGGATTTTAGGTGGTAGCCCATACAATGTTGGCACTGAGGA CTGGATCAGCCCACTTCGAGCCCAGGGTTGGATGTGA
Protein sequence (LotjaGi1g1v0286800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKKGWFSSVKKKVFKSSSSKDSPQEKRENEGKGQHEEPEVVSFEHFPTDSSPDITNDQRSVASVPVTEDKNHAIAFAAG TSAAVAAAQKAARVVRLAGRGRYSKEQMAATLIQSQYRGYLARRALRALKGLVRLQALVRGHHVRKQAQMTMRCMQALVR VQGRVRARRLQLTHQRLQGHDRKEQEPKFKSPMNIKGNNYEHLRKHEATMKKERALALAFNFQQQQNQYLQIDPTTGDDI ERCSNEREKAQLDWNRLERWMSSSQSHVRQRENPYMTLATTATSTTTTDNMSEEKTLEIDMVLPRGSIHTNMGLTDQDFL VSSPTSNWHYHRQQSGGVVPSYMAPTQSARAKVRRSQGPFKQRAFAGPQWNSSTRTYAAGPGCDSSSSGGTTAAHQFSRS PSPKINGIRLQSRRILGGSPYNVGTEDWISPLRAQGWM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 437 | 437 | 9.0E-163 | – | |
| MobiDBLite | 1 | 62 | 62 | - | – | |
| PANTHER | 1 | 437 | 437 | 9.0E-163 | – | |
| MobiDBLite | 15 | 44 | 30 | - | – | |
| Gene3D | 104 | 159 | 56 | 1.7E-5 | – | |
| SMART | 105 | 127 | 23 | 5.7E-5 | ||
| ProSiteProfiles | 106 | 134 | 29 | 9.908 | ||
| Pfam | 108 | 127 | 20 | 7.3E-6 | ||
| SMART | 128 | 149 | 22 | 58.0 | ||
| ProSiteProfiles | 130 | 157 | 28 | 8.663 | ||
| Pfam | 133 | 148 | 16 | 0.17 | ||
| MobiDBLite | 176 | 190 | 15 | - | – | |
| MobiDBLite | 176 | 196 | 21 | - | – | |
| Pfam | 323 | 365 | 43 | 8.4E-6 | ||
| MobiDBLite | 354 | 406 | 53 | - | – | |
| MobiDBLite | 366 | 406 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0286800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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