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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0290500 |
| Transcript ID | LotjaGi1g1v0290500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oligopeptide transporter, putative; TAIR: AT4G27730.1 oligopeptide transporter 1; Swiss-Prot: sp|Q9T095|OPT6_ARATH Oligopeptide transporter 6; TrEMBL-Plants: tr|A0A151SS88|A0A151SS88_CAJCA Oligopeptide transporter 6; Found in the gene: LotjaGi1g1v0290500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:70624901..70627838) extracted from Lotus japonicus Gifu genome v1.2.
TCATATGAAAGGTATGATGCAGAATATTGTCTCATGCTATGTATTCAATTTTAGGTTCTGGGATTTGGTTGGGCAGGACT GTTCAGGAAATATCTGGTTGAGCCAGGGGAGATGTGGTGGCCTAATAATCTAGTGCAGGTCTCATTATTCAGGTAAGTTT TTTTTTTTCAACCAATGTGTTATTCAATCATCAGCTACTTCTTAAAGAATGCAACTATGCTAATAGCATGTTTGGATCAG CTTCTTTGTTCTTAAAATCAATTCTCACACCCAGAAGCTACTCACACAAGCTTCTCTCCATAGTTAATTTTGACAGAAGA TTCAGTGCTAGAAGAGTTTCCAAACACGCAATAAGCGAGTTTATTGTAATGCAGGGCTCTACATGAGAAAGACAAGAGAT CAAAAGGAGGCACAACTCGTACTCAATTTTTTCTCCTTGTTTTGATCTCTTCCTTGGCATACTATGTGTTTCCCGGTTAC ATGTTTAAAATGCTGACATCTTTCTCTTGGGTATGTTGGCTTGCTCCCAAGTCTATCCTAGTCCAACAACTTGGTTCTGG CATGCGGGGTCTTGGCATTGCTGCACTGGGATTTGATTGGTCTACAATTTCTTCTTACCTTGGTAGTCCACTAGCTAGTC CATGGTTTGCCACTGCCAACATTGCTGTTGGATTTGTTTTTGTCATGTATGTGATGACACCAATTACTTACTGGTCAAAT GCCTATGGTGCCAAGAAGTTTCCAATATTTTCAAGTGGCCTTTTTATGGGAAATGGCTCGGAATATGAAATTTTGTCTAT TGTGAACTCCAATTTCCATCTTGATCGTGAGGCTTATTCAAAGAACGGGCCTTTACATCTCAGTACATTCTTTGCAATGA CTTATGGCCTTGGATTCGCGGCGCTTTCTGCTACGGTAGTGCATGTTCTGCTCTTTCATGGAAGGTAGCCACCCTGTGCT TCATTTTATTTTATCATCAATATGCCATGTTTAAGGATTTTACATATTATGAACATCCCCCAATTTTAAAATTTATTTAT GCAGCTCTTGAATAGACCTCTCCTGAACTTATATATCAAAGAGCTTCAATTTATACATTCATTTCTAGTAGAAATTTCTG AATTTAAATTAACTTACAAGACATAGATATAGATTAGCGCATATTATAATTCAATAGTGTAGTGATGTTATGAGTAATTG CATTCCAGGTATGATTCTCTAAACTTGATTTCCATATACTGATGTTATCAGTTACTATGGTGAGTTATGCTTGTATGATG TTTGGATCAAATTGGCATGCTTTCACATCCTAGAACTACAAGAGTTTTTCTTATATTCCAATCTAGTATGATCACAGATT TCTTCTGTTTGAATAAAGTCAAGATGTTCTTGTTAGGACATAATATGAAAGTCTGCAACAGTCCTCAACATATTCCAATT TATTTTTTGGACAACTGTGTGATGTCTTGCAAAACTTTAATTTCATTTGCAATTACCATATTTTTTCAGGGAAATATGGA TGCAGAGTAAAAGGGCCTTTGAAGATAGTAAAAAAATTGACATACACACAAGACTTATGAGGAGGTACAAATCAGTCCCC CAGTGGTGGTTTCACATCATTCTAGTGGCGAACATAGCTCTGATTATTTTTATCTGTCAGTACTACAACGAATCACTTCA ATTACCTTGGTGGGGTGTGTTGCTAGCTTGTGCAATTGCCATTTCCTTCACTCTACCAATCGGTATTATATCAGCCACTA CAAATCAGGTACCTTGACATTATATTAACATGTTTGGATTCGCATTCAAATCTTTTAGAATCACTTCTCCTCCCATAAAA GTCATTTGGAGTAGCTTCTCCCAGAATCAAATCTCCCGTGTATCCTAACAATCACTTACGTAATGAGCTTGCTATTTCTA TAATGGAGCTAAGGAGAACTGTCTAAGACTTTGTCACTTTCTTCTTAACAGCAACCAGGTTTGAACATTATAACAGAATA TATCATTGGCTACATGTATCCGGAGTTCCCTGTGGCTAACATGTGCTTTAAGGTGTATGGTTACATTAGCATGGCTCAAG CACTAACGTTTTTGTCAGACTTCAAACTCGGTCACTACATGAAGATTCCACCAAGAACAATGTTCTTGGCACAGGTCAGT TATGATTCATTTTATTCCTCTCTCATTTCAAATTTGAGCCATAAGGGTCCTAAAATTATGATTAGTGGACACCAGCACGA ACATACATTAGTTTTCAGAGGTGTCACAATGCGCTGGTGTCCATGAATCATTAATCAAAACCTAAAGCTGAATTCACTTT ATGCAGGTGGTAGGAACAATCATATCAGTAATTGTGTACACATTAACTGCATGGTGGTTGATGGGGACAATCCCTAACCT TTGTGACATCTCCAAATTACCAGATGATAGCCCTTGGCGATGCCCAATGGACAATGTCTTCTATGATGCTTCTGTTATCT GGGGTCTTCTAGGACCACGAAGGATATTTGGAGACCTCGGCGAATATGCCAAAGTGAATCTATTCTTCCTTGGTGGAGCC ATTGCTCCACTTCTAGTTTGGCTTGCTCACAAGGCCTTCCCAGGACAAAAATGGATACGTCTGATTCACATGCCTATCAT GCTTGGTGCTACATCAATGATGCCCCCTGCCACTGCAGTTAACTACACTAGTTGGTTACTCGTCGCATTTCTCTCAGGGT ATGTGGTATTTAGGTACAAACAAGAATGGTGGAAGCGCTACAATTATGTTATGTCTGGTGGTCTTGATGCTGGAACTGCC TTTATGACAATCTTGCTGTTTCTTACACTCAATGGCATTAGTATTGACTGGTGGGGAAATGGTAATGTAGATGGGTGCCC CTTGGCTCGTTGTCCTACTGCAAAGGGCATTGCAATTGAAAGTTGTCCTTTGCAATGA
CDS sequence (LotjaGi1g1v0290500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGTGGCCTAATAATCTAGTGCAGGTCTCATTATTCAGGGCTCTACATGAGAAAGACAAGAGATCAAAAGGAGGCAC AACTCGTACTCAATTTTTTCTCCTTGTTTTGATCTCTTCCTTGGCATACTATGTGTTTCCCGGTTACATGTTTAAAATGC TGACATCTTTCTCTTGGGTATGTTGGCTTGCTCCCAAGTCTATCCTAGTCCAACAACTTGGTTCTGGCATGCGGGGTCTT GGCATTGCTGCACTGGGATTTGATTGGTCTACAATTTCTTCTTACCTTGGTAGTCCACTAGCTAGTCCATGGTTTGCCAC TGCCAACATTGCTGTTGGATTTGTTTTTGTCATGTATGTGATGACACCAATTACTTACTGGTCAAATGCCTATGGTGCCA AGAAGTTTCCAATATTTTCAAGTGGCCTTTTTATGGGAAATGGCTCGGAATATGAAATTTTGTCTATTGTGAACTCCAAT TTCCATCTTGATCGTGAGGCTTATTCAAAGAACGGGCCTTTACATCTCAGTACATTCTTTGCAATGACTTATGGCCTTGG ATTCGCGGCGCTTTCTGCTACGGTAGTGCATGTTCTGCTCTTTCATGGAAGGGAAATATGGATGCAGAGTAAAAGGGCCT TTGAAGATAGTAAAAAAATTGACATACACACAAGACTTATGAGGAGGTACAAATCAGTCCCCCAGTGGTGGTTTCACATC ATTCTAGTGGCGAACATAGCTCTGATTATTTTTATCTGTCAGTACTACAACGAATCACTTCAATTACCTTGGTGGGGTGT GTTGCTAGCTTGTGCAATTGCCATTTCCTTCACTCTACCAATCGGTATTATATCAGCCACTACAAATCAGCAACCAGGTT TGAACATTATAACAGAATATATCATTGGCTACATGTATCCGGAGTTCCCTGTGGCTAACATGTGCTTTAAGGTGTATGGT TACATTAGCATGGCTCAAGCACTAACGTTTTTGTCAGACTTCAAACTCGGTCACTACATGAAGATTCCACCAAGAACAAT GTTCTTGGCACAGGTGGTAGGAACAATCATATCAGTAATTGTGTACACATTAACTGCATGGTGGTTGATGGGGACAATCC CTAACCTTTGTGACATCTCCAAATTACCAGATGATAGCCCTTGGCGATGCCCAATGGACAATGTCTTCTATGATGCTTCT GTTATCTGGGGTCTTCTAGGACCACGAAGGATATTTGGAGACCTCGGCGAATATGCCAAAGTGAATCTATTCTTCCTTGG TGGAGCCATTGCTCCACTTCTAGTTTGGCTTGCTCACAAGGCCTTCCCAGGACAAAAATGGATACGTCTGATTCACATGC CTATCATGCTTGGTGCTACATCAATGATGCCCCCTGCCACTGCAGTTAACTACACTAGTTGGTTACTCGTCGCATTTCTC TCAGGGTATGTGGTATTTAGGTACAAACAAGAATGGTGGAAGCGCTACAATTATGTTATGTCTGGTGGTCTTGATGCTGG AACTGCCTTTATGACAATCTTGCTGTTTCTTACACTCAATGGCATTAGTATTGACTGGTGGGGAAATGGTAATGTAGATG GGTGCCCCTTGGCTCGTTGTCCTACTGCAAAGGGCATTGCAATTGAAAGTTGTCCTTTGCAATGA
Protein sequence (LotjaGi1g1v0290500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWWPNNLVQVSLFRALHEKDKRSKGGTTRTQFFLLVLISSLAYYVFPGYMFKMLTSFSWVCWLAPKSILVQQLGSGMRGL GIAALGFDWSTISSYLGSPLASPWFATANIAVGFVFVMYVMTPITYWSNAYGAKKFPIFSSGLFMGNGSEYEILSIVNSN FHLDREAYSKNGPLHLSTFFAMTYGLGFAALSATVVHVLLFHGREIWMQSKRAFEDSKKIDIHTRLMRRYKSVPQWWFHI ILVANIALIIFICQYYNESLQLPWWGVLLACAIAISFTLPIGIISATTNQQPGLNIITEYIIGYMYPEFPVANMCFKVYG YISMAQALTFLSDFKLGHYMKIPPRTMFLAQVVGTIISVIVYTLTAWWLMGTIPNLCDISKLPDDSPWRCPMDNVFYDAS VIWGLLGPRRIFGDLGEYAKVNLFFLGGAIAPLLVWLAHKAFPGQKWIRLIHMPIMLGATSMMPPATAVNYTSWLLVAFL SGYVVFRYKQEWWKRYNYVMSGGLDAGTAFMTILLFLTLNGISIDWWGNGNVDGCPLARCPTAKGIAIESCPLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 517 | 517 | 1.2E-130 | ||
| PANTHER | 1 | 553 | 553 | 0.0 | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| TIGRFAM | 1 | 520 | 520 | 4.4E-143 | ||
| TIGRFAM | 1 | 519 | 519 | 2.9E-150 | ||
| PANTHER | 1 | 553 | 553 | 0.0 | – | |
| Phobius | 32 | 50 | 19 | - | – | |
| TMHMM | 32 | 51 | 20 | - | – | |
| Phobius | 51 | 103 | 53 | - | – | |
| TMHMM | 76 | 98 | 23 | - | – | |
| Phobius | 104 | 126 | 23 | - | – | |
| TMHMM | 105 | 127 | 23 | - | – | |
| Phobius | 127 | 137 | 11 | - | – | |
| Phobius | 138 | 157 | 20 | - | – | |
| Phobius | 158 | 176 | 19 | - | – | |
| Phobius | 177 | 201 | 25 | - | – | |
| TMHMM | 179 | 201 | 23 | - | – | |
| Phobius | 202 | 235 | 34 | - | – | |
| Phobius | 236 | 257 | 22 | - | – | |
| TMHMM | 236 | 255 | 20 | - | – | |
| Phobius | 258 | 262 | 5 | - | – | |
| Phobius | 263 | 284 | 22 | - | – | |
| TMHMM | 265 | 287 | 23 | - | – | |
| Phobius | 285 | 347 | 63 | - | – | |
| TMHMM | 300 | 322 | 23 | - | – | |
| TMHMM | 347 | 369 | 23 | - | – | |
| Phobius | 348 | 370 | 23 | - | – | |
| Phobius | 371 | 417 | 47 | - | – | |
| Phobius | 418 | 438 | 21 | - | – | |
| TMHMM | 421 | 443 | 23 | - | – | |
| Phobius | 439 | 446 | 8 | - | – | |
| Phobius | 447 | 463 | 17 | - | – | |
| TMHMM | 463 | 485 | 23 | - | – | |
| Phobius | 464 | 468 | 5 | - | – | |
| Phobius | 469 | 486 | 18 | - | – | |
| Phobius | 487 | 497 | 11 | - | – | |
| Phobius | 498 | 519 | 22 | - | – | |
| TMHMM | 506 | 528 | 23 | - | – | |
| Phobius | 520 | 554 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0290500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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