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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0290700 |
| Transcript ID | LotjaGi1g1v0290700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oligopeptide transporter, putative; TAIR: AT4G27730.1 oligopeptide transporter 1; Swiss-Prot: sp|Q9T095|OPT6_ARATH Oligopeptide transporter 6; TrEMBL-Plants: tr|A0A0S3RE33|A0A0S3RE33_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0290700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:70639432..70645024) extracted from Lotus japonicus Gifu genome v1.2.
ATAAAAAACATAATTAACTAGTGTCATGAGTTTATTGGTTGCATTTGAAACTGTTTTGAAACTGTCTCAATTGAGACAAT ACCGAAGAGGTCACCTTTACACAAACAACATTTTTAAGTTTGCCTAAATTAAATATGAAAGTATTACACACATGAAACAT AAATGAATCTAGACCAAAAGAAGAGAGGATCTGAAACACCCTGTAAGAACCTAACATACTGATGCCATTTTTAGCAAAAA CATCGAGTTGACTTCCCTAAAAATATGCCTCCAAAGGTGAATCTTGTGACATCCTATGTTTAGCAAAGCAATGGCCACCT CAGAATCACATTCATTCAATGTTAACTCTATAAAAGCCCTTGGATTTGGCAAGCATTATCTATGAATGATGCATGCCCCA TCATTCAGCATAAAGAACCAGCAATGAAACACCTCTGAGGACCCCTCCACAAAGCTGCGTTGTTGCTTCCAGGTTAGAAA GATGCATATATTATCCAGTTTTGACATTGTAGTAGTGTTTCTTTATTTGCATTGTGCATGAATTTGAATCAGGCTATGAA AATGGGATAGAATCATAACCCAAAAATGAAATGCACACTTTCTTTATCAGAAACGCTCGTGAATTCTTATCAGCATTTGT GAGCACCGAGCATGGCTTCAAGGTTTGAGATGGAAGGAAGCAAGACGACAGAGGAGGTGAATAGAGAGCATGAAGAAGAA GAAGAAGAAGAAATAGAAGAAGAGAGCCCTGTGAAACAAGTGGAACTCACAGTGCCGAAAACCGATGACCCCAGTTTGCA CATTCTTACATTCAGAATGTGGTTTCTGGGTGTTGTATCTTGTGTGTTGCTTTCCTTTGTGAACCAATTCTTTTGGTACA GAACTGAGCCTTTGACAGTGACATCAATTTCTGCCCAGATTGCTGTGGTTCCAATTGGCCATTTCATGGCGAGGACATTG CCGACTCGCGTGTTTTTCCAGGGATCGCGCTTCGAATTCTCGCTCAATAGAGGGCCATTCAATGTTAAGGAGCATGTTCT CATAACAATCTTTGCAAATTCTGGTGCTGGAAGTGTCTACGCTACGCATATTTTGACTGCAGTGAAGCTCATTTACAGAA GAAAACTCGATTTCCTCCCCGCAATATTGCTCATGCTCACCACTCAGGTTCTCTTCAACCCATAATTCTATGTATTTTTC TCATTTCTAGGTAGCCTAAAAGTTACTTTACTTGTGCTTTAAGAATCTTCATATTCTTAACTGTTGAATGTTATGGGACT CTGTGAGTGCGTGTTTGGAAATCGTTTTTCAATTGATTCTAAACCTAGAATCAATTTTCGGGAGAAATTTATGTGAGTAG GTTCTGAATTTCAGAATTGATTCCAGCCTTAGGGTAAGAGAAGCTGATCCAAAGATGCTATGAATAGTGAAATTGAGGGA GAAAATAGCACAATCTTGTTAAGTGGCAACAACTTGGAGAACGAAATTTAATAATCCAGGACAAGTTGTCAACCAAAGCG TTAAATACTTTTCAATTGCAAGTCCACTTATGAAGAATTTTATCACCTGATAGCTTTAGTAGCTATTAAGGACCACTTAG AAAAACCCAGAGAGAATATTAATCAATATCAAATAATTCTTCAGATTTTCACTAGATAAAAAAAGTTGAAATTTTAACCT GTATTCAATCCTGTCATCTACAAATCCACTAATTCATCTTTGACCCTGAGATTATTTGGTCAGGGTTGATTGTGGACACT TGAATGATGTTTGATTTATTCTGGCATAGAAACTATGTTATGTTGAAATGATTGTCACAACTCACAATCAGCTAAACTTC CATTTTCTTCATGTTGTACTAATTTTCTTGGCTAACTCATATGAAAGGGTACAGAATATTGTCTCATGCTTGTTATTCAA ATTCAGGTGTTGGGATTTGGCTGGGCAGGACTGTTTAGGAAATTTCTGGTTGAGCCAGGGGAGATGTGGTGGCCTTCTAA TCTAGTACAGGTCTCATTATTCAGGTAAATCTTTTCAACAAATTATCTTATTCAAACTTCCGCAATTTCTTAAAGAATGC AACTATGCTAATAACATGTTTGGGTCCGCTTCTGTGTTCTTAGAATCAATTCTGAGACCTAGAAGTTACTCACAGAAGCT TCTCTCCATCATTAATTTTGACTTTAGAATCAATGGTGAAAGAATTTCCAAACACGCAATAAGCTAGTTTATTGTAATGC AGGGCTCTACACGAGAAAGACAAGAGACTGAAAGGAGGCACAACCCGCACTCAGTTCTTCGTCCTTGTCTTGATCTCTGC CATGGCATACTATGTGTTGCCTGGCTACTTGTTTCAAATGCTGACATCTTTCTCTTGGGTATGTTGGTTTGCTCCCAAGT CTATCCTAGTCCAACAACTTGGTTCTGGCATGAAGGGTCTTGGCATTGGTGCACTTGGATTTGATTGGTCTGTGATATCT TCGTACCTTGGTAGTCCACTAGCTAGTCCATGGTTCGCCACTGCAAATGTTGCTGTTGGATTTTTTATGGTCATGTATGT GATGACACCACTTGCTTACTGGACAAATACTTATGATGCCAAGACGTTTCCAATATTTTCAAGTAAACTTTTTATGGGAA ATGGTTCAGAGTATAAAATTGATTCTATTGTGGACTCCAATTTCCATCTTGATCGTGAGGCTTATTCAAAGAGCGGGACT TTACATCTCAGCACATTCTTTGCAATGACTTATGGCCTTGGATTCGCGGCGCTTTCTGCTACGATAGTGCATGTTCTGCT CTTTCATGGAAGGTAGCCACCCTGTGATTCATTTTCTTTTATCATCTATATGAAATGTTATGGATTTTACATATTATGAT CGTCCCCCATTTTTAAATTTTATGTAGCTCTTAAATAGACCTCTTCTGAACTTATGGGCTAAACAGTTTCAATTTATAAA TGATCATTTCCTTGTATTTTTTTTTTTGAAAATGTTATTTCCTTGTAGAAACTGCTGAGTTTAAATTAACTTATAAGACA TACATATAAATTACAGCATGTTATGATTCAATAGTATAGAGTAATTGTGAACCTAATATCATTGCGATTCATTGTTGTGT TATCTGTTTCACTTGGGAAGTGTGAATGTGGGTACCTGGTATCATTCTCTAAACTTGATTTCCATATACTCATGATATCA GTTACTATGGTGAGTCATGATTGTAGTGATGTTTGGATTAAATTGGAATACTTTCACATCCTAGAACTACGAGAGTTTTT CTTATATAGTATGATCACAGATTTCTTCTGTTTGAATAAAGTAAAGATGTTCTTGTTATGATTTAATATGAAAGTCTGCA CAGTCCTCAGCATATTCCAAATTTTATTTTGGACAAATGTGATGTCTTAATTTCATTTGCAATTACCGTATTTATTCAGG GAAATATGGATGCAGAGCAAAAGGGCATTTGGAGATAATAAAAAAATTGACATACACACTAGACTTATGAGGAGGTACAA ATCAGTCCCCCAGTGGTGGTTTCACATCATTCTAGTGTTGAACATAGCTCTGATTCTTTTTATCTGTGAGTACTTCAACG AATCACTTCAATTACCTTGGTGGGGTGTGTTGCTAGCTTGTGCAATTGCCATTGCCTTCACTCTTCCAATCGGTATTATA GCAGCCACTACAAATCAGGTACCTTGACAATCTATAACATGTCTAGATTCATGTACAAATTCATTAACTCACTTTTCCTC CCATAAAAGTCATTAGGTGTAGCTTCTCCCATAATCAAATCTACCGTGTATCCAAACAATCACTTACTTAAAGAGCTTGC TATTTTCATATTGGCGCTAAGGAGAACTGTCTAACACTTCATGACTTTCTTCTTAACAGCAACCAGGTTTAAACATTATA ACAGAATACATCATTGGTTACATGTATCCAGAGCGCCCTGTGGCTAACATGTGCTTTAAGGTGTATGGTTACATTAGCAT GGCTCAAGCACTAACATTCTTGGGAGACTTCAAGCTCGGTCACTATATGAAGATTCCACCAAGAACAATGTTCATGGCAC AGGTTAGCTATGATTCATTCCTATCTCATTCTATGTTAAAAAATGTTAGGATTAAGACTGTAATCTCTCCTAGTTATGAT GACTTGTTAGTTATGATTACCTAGTTGCAGAAAACTAGAATAAAATTATGTGGGTTAGTTGTAGAAAACTAAAAAAAACA CTACCTTTGTTCCAGAATGTTCTTTTTTTCGAAAAGCAGTTCTGGAATGTTTGTTGTTTAAGGTTATCCACAGAATAGGA TGTCGTTTATTGATATACAAAACTTGCCTAGAACAGTCGTCTCCTTGTCATGATGCCTTCGTTTTCTTTGTTTTCTTCAC CAAAAAACTAAAGCTGAATGCATTGTATGTAGGTGGTGGGAACAATCATATCAGTAGTTGTGTACACTGGAACTGCATGG TGGTTGATGGGGACAATCCCTGACCTTTGTGATGCTTCAAAATTACCAACTGATAGCCCTTGGCTATGCCCAATGGACAA CGTCTTCTATGATGCATCTGTTATCTGGGGTCTTCTAGGACCACGAAGGATATTTGGAGACCAAGGTGTATATGGCAAAG TGAATTACTTCTTCCTTGGTGGAGCCATTGCTCCTCTTCTAGTTTGGCTTGCTCACAAGGCCTTCCCAGATAAAGAATGG TTACGCCTGATTCACATGCCTATCATGCTTGGTGCTACATCAATGATGCCCCCTGCCACTGCAGTTAACTACACTAGTTG GTTACTCGTCGCGTTTCTCTCAGGGTATGTGATATTTAGGTACAAACAACAATGGTGGACGCGCTACAATTATGTTATGT CTGGTGGTCTTGATGCTGGAACTGCCTTTATGACAATCTTGCTGTTTCTTACACTCAATGGCATTAGTATTGACTGGTGG GGAAATGGTAATGTAGATGGGTGCCCCTTGGCTCGTTGTCCTACTGCAAAGGGCGTTGCAGTTGCAAGTTGCCCTGTGCA ATGATCACTACTTCATGAACCATGATTCTTTATTTAGGTACATTTTGTATGTGCCAATGTATAAAAAAAAGTATCGTTTA CTTTTTATCTTGAAGTGAGTGTCACCGTCCGTTTAATTGATATTCAACTGTTTCTCTTGAGACATCTTCCTAATTCCTAC AACGCTAATCACCATCCTATATAGCGCGCATCATCAAAGCATCCTGGTCTCCCAAATCCTGCTCACATTGCTGGTCTTGA ATCATCTTGACTTGTACTTTCTTTATTTAGAGTAAGAGAAATGCTAGCAACCCTTCATGAAGCCCCACTAGCTTCCACCT CTGCATAGGAAAAGCAAGAAATCCTTATCACTACAAGTGAAGTGAACTAGCTAAAGTATGTGTGTGCTCTCCATCCTTTC ATAATTGGAAGTTGAACCTCTTAAACTTGTATAATATTTGAGATTGAGAACAGTACTCCTTGTACATAGCCTAGCTTGAA ATTTATGAATAATTATTTCTATTATCTATATCCTACTTTACGTGGTAGTAACATTTGAATATTGAGCTTAAGG
CDS sequence (LotjaGi1g1v0290700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCAAGGTTTGAGATGGAAGGAAGCAAGACGACAGAGGAGGTGAATAGAGAGCATGAAGAAGAAGAAGAAGAAGA AATAGAAGAAGAGAGCCCTGTGAAACAAGTGGAACTCACAGTGCCGAAAACCGATGACCCCAGTTTGCACATTCTTACAT TCAGAATGTGGTTTCTGGGTGTTGTATCTTGTGTGTTGCTTTCCTTTGTGAACCAATTCTTTTGGTACAGAACTGAGCCT TTGACAGTGACATCAATTTCTGCCCAGATTGCTGTGGTTCCAATTGGCCATTTCATGGCGAGGACATTGCCGACTCGCGT GTTTTTCCAGGGATCGCGCTTCGAATTCTCGCTCAATAGAGGGCCATTCAATGTTAAGGAGCATGTTCTCATAACAATCT TTGCAAATTCTGGTGCTGGAAGTGTCTACGCTACGCATATTTTGACTGCAGTGAAGCTCATTTACAGAAGAAAACTCGAT TTCCTCCCCGCAATATTGCTCATGCTCACCACTCAGGTGTTGGGATTTGGCTGGGCAGGACTGTTTAGGAAATTTCTGGT TGAGCCAGGGGAGATGTGGTGGCCTTCTAATCTAGTACAGGTCTCATTATTCAGGGCTCTACACGAGAAAGACAAGAGAC TGAAAGGAGGCACAACCCGCACTCAGTTCTTCGTCCTTGTCTTGATCTCTGCCATGGCATACTATGTGTTGCCTGGCTAC TTGTTTCAAATGCTGACATCTTTCTCTTGGGTATGTTGGTTTGCTCCCAAGTCTATCCTAGTCCAACAACTTGGTTCTGG CATGAAGGGTCTTGGCATTGGTGCACTTGGATTTGATTGGTCTGTGATATCTTCGTACCTTGGTAGTCCACTAGCTAGTC CATGGTTCGCCACTGCAAATGTTGCTGTTGGATTTTTTATGGTCATGTATGTGATGACACCACTTGCTTACTGGACAAAT ACTTATGATGCCAAGACGTTTCCAATATTTTCAAGTAAACTTTTTATGGGAAATGGTTCAGAGTATAAAATTGATTCTAT TGTGGACTCCAATTTCCATCTTGATCGTGAGGCTTATTCAAAGAGCGGGACTTTACATCTCAGCACATTCTTTGCAATGA CTTATGGCCTTGGATTCGCGGCGCTTTCTGCTACGATAGTGCATGTTCTGCTCTTTCATGGAAGGGAAATATGGATGCAG AGCAAAAGGGCATTTGGAGATAATAAAAAAATTGACATACACACTAGACTTATGAGGAGGTACAAATCAGTCCCCCAGTG GTGGTTTCACATCATTCTAGTGTTGAACATAGCTCTGATTCTTTTTATCTGTGAGTACTTCAACGAATCACTTCAATTAC CTTGGTGGGGTGTGTTGCTAGCTTGTGCAATTGCCATTGCCTTCACTCTTCCAATCGGTATTATAGCAGCCACTACAAAT CAGCAACCAGGTTTAAACATTATAACAGAATACATCATTGGTTACATGTATCCAGAGCGCCCTGTGGCTAACATGTGCTT TAAGGTGTATGGTTACATTAGCATGGCTCAAGCACTAACATTCTTGGGAGACTTCAAGCTCGGTCACTATATGAAGATTC CACCAAGAACAATGTTCATGGCACAGGTGGTGGGAACAATCATATCAGTAGTTGTGTACACTGGAACTGCATGGTGGTTG ATGGGGACAATCCCTGACCTTTGTGATGCTTCAAAATTACCAACTGATAGCCCTTGGCTATGCCCAATGGACAACGTCTT CTATGATGCATCTGTTATCTGGGGTCTTCTAGGACCACGAAGGATATTTGGAGACCAAGGTGTATATGGCAAAGTGAATT ACTTCTTCCTTGGTGGAGCCATTGCTCCTCTTCTAGTTTGGCTTGCTCACAAGGCCTTCCCAGATAAAGAATGGTTACGC CTGATTCACATGCCTATCATGCTTGGTGCTACATCAATGATGCCCCCTGCCACTGCAGTTAACTACACTAGTTGGTTACT CGTCGCGTTTCTCTCAGGGTATGTGATATTTAGGTACAAACAACAATGGTGGACGCGCTACAATTATGTTATGTCTGGTG GTCTTGATGCTGGAACTGCCTTTATGACAATCTTGCTGTTTCTTACACTCAATGGCATTAGTATTGACTGGTGGGGAAAT GGTAATGTAGATGGGTGCCCCTTGGCTCGTTGTCCTACTGCAAAGGGCGTTGCAGTTGCAAGTTGCCCTGTGCAATGA
Protein sequence (LotjaGi1g1v0290700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASRFEMEGSKTTEEVNREHEEEEEEEIEEESPVKQVELTVPKTDDPSLHILTFRMWFLGVVSCVLLSFVNQFFWYRTEP LTVTSISAQIAVVPIGHFMARTLPTRVFFQGSRFEFSLNRGPFNVKEHVLITIFANSGAGSVYATHILTAVKLIYRRKLD FLPAILLMLTTQVLGFGWAGLFRKFLVEPGEMWWPSNLVQVSLFRALHEKDKRLKGGTTRTQFFVLVLISAMAYYVLPGY LFQMLTSFSWVCWFAPKSILVQQLGSGMKGLGIGALGFDWSVISSYLGSPLASPWFATANVAVGFFMVMYVMTPLAYWTN TYDAKTFPIFSSKLFMGNGSEYKIDSIVDSNFHLDREAYSKSGTLHLSTFFAMTYGLGFAALSATIVHVLLFHGREIWMQ SKRAFGDNKKIDIHTRLMRRYKSVPQWWFHIILVLNIALILFICEYFNESLQLPWWGVLLACAIAIAFTLPIGIIAATTN QQPGLNIITEYIIGYMYPERPVANMCFKVYGYISMAQALTFLGDFKLGHYMKIPPRTMFMAQVVGTIISVVVYTGTAWWL MGTIPDLCDASKLPTDSPWLCPMDNVFYDASVIWGLLGPRRIFGDQGVYGKVNYFFLGGAIAPLLVWLAHKAFPDKEWLR LIHMPIMLGATSMMPPATAVNYTSWLLVAFLSGYVIFRYKQQWWTRYNYVMSGGLDAGTAFMTILLFLTLNGISIDWWGN GNVDGCPLARCPTAKGVAVASCPVQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 55 | 55 | - | – | |
| MobiDBLite | 1 | 35 | 35 | - | – | |
| Coils | 10 | 31 | 22 | - | – | |
| PANTHER | 22 | 744 | 723 | 0.0 | – | |
| PANTHER | 22 | 744 | 723 | 0.0 | – | |
| TIGRFAM | 29 | 711 | 683 | 1.0E-187 | ||
| TIGRFAM | 37 | 710 | 674 | 1.7E-208 | ||
| Pfam | 52 | 708 | 657 | 3.3E-174 | ||
| TMHMM | 53 | 75 | 23 | - | – | |
| Phobius | 56 | 76 | 21 | - | – | |
| Phobius | 77 | 87 | 11 | - | – | |
| Phobius | 88 | 109 | 22 | - | – | |
| Phobius | 110 | 128 | 19 | - | – | |
| Phobius | 129 | 155 | 27 | - | – | |
| TMHMM | 129 | 151 | 23 | - | – | |
| Phobius | 156 | 160 | 5 | - | – | |
| Phobius | 161 | 182 | 22 | - | – | |
| TMHMM | 161 | 182 | 22 | - | – | |
| Phobius | 183 | 222 | 40 | - | – | |
| TMHMM | 223 | 245 | 23 | - | – | |
| Phobius | 223 | 250 | 28 | - | – | |
| Phobius | 251 | 269 | 19 | - | – | |
| TMHMM | 270 | 289 | 20 | - | – | |
| Phobius | 270 | 288 | 19 | - | – | |
| Phobius | 289 | 294 | 6 | - | – | |
| Phobius | 295 | 318 | 24 | - | – | |
| TMHMM | 296 | 318 | 23 | - | – | |
| Phobius | 319 | 369 | 51 | - | – | |
| TMHMM | 370 | 392 | 23 | - | – | |
| Phobius | 370 | 393 | 24 | - | – | |
| Phobius | 394 | 426 | 33 | - | – | |
| TMHMM | 427 | 444 | 18 | - | – | |
| Phobius | 427 | 448 | 22 | - | – | |
| Phobius | 449 | 453 | 5 | - | – | |
| TMHMM | 454 | 476 | 23 | - | – | |
| Phobius | 454 | 477 | 24 | - | – | |
| Phobius | 478 | 538 | 61 | - | – | |
| TMHMM | 501 | 523 | 23 | - | – | |
| TMHMM | 538 | 560 | 23 | - | – | |
| Phobius | 539 | 561 | 23 | - | – | |
| Phobius | 562 | 585 | 24 | - | – | |
| Phobius | 586 | 603 | 18 | - | – | |
| Phobius | 604 | 614 | 11 | - | – | |
| TMHMM | 607 | 629 | 23 | - | – | |
| Phobius | 615 | 633 | 19 | - | – | |
| Phobius | 634 | 652 | 19 | - | – | |
| Phobius | 653 | 677 | 25 | - | – | |
| TMHMM | 654 | 676 | 23 | - | – | |
| Phobius | 678 | 688 | 11 | - | – | |
| Phobius | 689 | 710 | 22 | - | – | |
| TMHMM | 697 | 719 | 23 | - | – | |
| Phobius | 711 | 745 | 35 | - | – | |
| Coils | 744 | 745 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0290700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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