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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0292900 |
| Transcript ID | LotjaGi1g1v0292900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTPase-activating protein gyp7; TAIR: AT3G49350.1 Ypt/Rab-GAP domain of gyp1p superfamily protein; Swiss-Prot: sp|Q9UUH7|GYP7_SCHPO GTPase-activating protein gyp7; TrEMBL-Plants: tr|I1KAY2|I1KAY2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0292900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:71060546..71066584) extracted from Lotus japonicus Gifu genome v1.2.
AATTAACAACACTCAAAAGAGAAAGAGGTTGGTTAGTTTGAGAGGTTTGAAAGATAACCAAAACGGCAACGTTTTAGCAA TGCTTAGAAGGCTCCTTCCCCAACTATGAAAGTAAAAGCCCAAAGCACTTTTCTTTTCCTTTATCAACAACAACAAAGTG TGAGGAGAATAGTAGATTCTTCTTCCAATTGCTTCTCACTCCTCTTCTCTTTCTCTCTCTATGATTTTAGTGGCGGTTTA GAGAGACACAATTACAAAGCAAACCTTCTTCTTCCTTCTATGAAACAACAAGTTGTGGCGGAATCAGAAGAAGAAGGAGA AGAAAAGAGGGATCGCGGTGAGGGCATTTCAGGCAGTTTCTCTCCATGTGCATAACCACCCTCTTGAACGCGAACAACAA CGTCACTCCGTTCATCTCCGGCGGCGGTGGTGGTGGTGGTGGTGTTAGATTCTCCTCCCTCATGGCCGCGACGGCGGCGC CATCTACTCAGACGGTGCTGTTCACGGCCTTGGCTGGCCTCGCTCTCGTCGCCGTCGTCTTCTACGGTGCAAGGAGGTAA AATCAAAATCAAAATCAAACAAAAACCAATGAGCGAATTCTAGAGAGAGAGAGAGAGCATCGCAATCGCAAAAACCCTAG CTCGCTCACTCACTCACTCTCCTTCACTTGACATTGTTTTCCGAAATTCATAGATGAATCCTCTTAGGCGAAGTATCAAT TCAGCTTCGTCGTCTTCCAATTCCTCTCCTTCCTCATCGTCGTCGTCGCAATCGTCGGCGTCGTCGGTGTCATCATCATC ATCTTCGTCGTCGTGGATCCATTTGCGTTCGGTTCTGTTTGTTGTTAGTTCTTCCTCACCAGCGTCTTGTTCCTCCACTG ATCGGTGAGTTCTTCTTCATCTCTCTTTCATCTTGCTCTCACTTTTTTTTTTTCTTCTTTTGGTTTTGTTTTGAAGCTCT TAGATTTCTATTACATTTTCTGTTTATTTCGTGTCAGATCTCAACTTCTGGGCATCCCCAATCTTGCTATCAGTGTCAGC TTAGATTGATCAGCTTCTGTGTTTTGCGTTTTTGTGCTTGCTGCACACACACTTCCCTGTGTGTGTTTCTATTTTGGGTT TCTTAGCCGGCAGCATTTCAGTCTGATTTGTGGGAATTATAGAGAAAACCCACCAAAATCCCTGATTTCTGTTGGGGAGG ATGATTGATGAGGAAGGAGGAGGGTTGATACGGAAGAGATAGTGAGAGGGAGAGGGAGACAGATCCTTATTTTGGGTTTT GATGGGGGTATTCCCCTGGAAAGTTTCTTCAATCTGAAGTTCCTTTCCTCTTGGCTTGAACTTTTAAATCTGCTGGTTCC CATTTTTCATGTCAAATTGCTTGTGAAATCACCCTTGCTTAGGGAAAATTTAACTTGGTGGTCTTGATCAGTTATCAAAG CCCCCACTTCTAGAAGTGTGTCTTGCTGAGCTAGAAAGGAAGATCTATGCTAGAATATATATGTTCATTTGGAGAAGGAA TTGATTGATGCTCTGGAATAATTAAGTTTTTGGCTTCTGAAAATTTTGTAGAAAATATTACAGGACTTGTCTGTCAATCT AAAAGTTGAATCAAATTTTACAAATTTGAGGCCTTGATGTTCAAGATTTCTTTCTGGATATATGTCTGAGGGATGTTGAT GTTTTCAAGTCTTCAAGGACCATTTTTTAAACTTATGTCTTCTGCCTTTATCCTTTTTGAAATTTCAAGGAATTTTAATC ATGCCCATAAATTTTTTACTTGGAATAGTCTGGTTCCTTCCTTTCAGAATAAATTAAATAATTATGAAGTTAAAATTTAA ACAAACAATGGTCATGCTGTGATATCCTGACTGGAAAGGGAATCAAATGTTTTGATTTTTCAAGTTTGGATTGAGTAACT TTAGTATTACATATAGATATAGTATTACTGAAGTCAGAGCTGAAATGCTCACTGGACAAGAACTCCAATGTTGAATTAAG CAGCCTGGCTATACGCAAATTTGATGTTGTTCATTTTCATATGTAAATTTATATCAGCATGATACAATATTAACTACATA ATTCAGGGTTTCTCGTGCTGATGCATTTAATTCTTTTAGCATTAAGGAAATTAGATAGTTCTGTGAGAACGCATTTTGCT CTAGAATCTATGAACACTCATGACATAAATATGTGTGAATCCTGTGACAGAATGGTAGTGATGTCGATATATGCTTGCTT GAGTTTTTCGGCCATGAGGAAAATAGGCCTCAATTGGCTTGAATATGCTTATCTATTATACTGGAGCACTGTGATGTGCT TTTAATCTGAAAATCTATTTTTCTATGTGCTTTTCTGCCCCCCCTTAATTTCTTAAATGGCTGTTTTTCTGCCTGTTCTC TAATCTGAAACTCATTTACAAGCAAGGACTGATTGGTATTTCTTTGTGGCTAAATTTCAGGGGTCGTCTTAAATCACCAT GGTCACGTAGGAAAAGAAAACACGCCCTTTCACCTCAGCAATGGAACAGCTTATTTACCCAAGATGGGAGAATTCGTGAT GGTGGACTTAAGTTCCTGAAAAAAGTTCGCAGTGGAGTGAGTTTACTAATCTATTTATTTAGTTATTAATTTGTACTTTA TGGAGTTTCTCCTTGGAATTAATTACATTTTAAATGTCTAATGCAGGGTGTTGAACCTAGCGTAAGAGCTGAAGTTTGGC CTTTCCTACTTGGAGTGTAAGCATGTTTTATCTTTCTGATAGAAACTGAAAATCTATTGAGTAGCAAAGAACAGTACAGT TATATTGGAAATAATGGAAATATTGCTGTAAACTCTCTGTTCTTTTGTTGTGTCCCATATTCTGCTTCATTTCCTTCATT GTTGTGTCCTTACTTGTCTAGACGCCTTTTTCTTTTTTAACATATGGATTAGCAGCCCATCATTTTCATGTTTCATTTCA ATGTGATCTTTATTTCTGAGTTTTAGACAGAAATGACATACAAAATGGGCATACACATGTAGCAAAATTTGAAGTTTCCT GTTTTGAAGTGTCATTCTCATATTGTCCTCTATTGAAATTTCTAGTGTCTGCTTCATAGCTTGGTTGATTTTTTTTTTTT ATATTTCATTTTTCAATAGATCAAACTTGATTCTTTTGCTTCATTTTATGCATTAGGCAGGATATTTGGTCACGTTATAG TTTATTTATTCTATATTGTTAAATTTTTTCCCACCCATTCTTTTCCTCGTATACTTATTTGCCTACTCAAACTTTTATGT GGTTACTGATTATGGGTACATTTAAACAGCTATGACTTGGACAGTACCAAAGAAGAAAGAGATGTTATAAGAACTCGAAA TAGGTGAGTATGCTAGTTTGATCCGCAAATCCAGGCTTGATCCATCATGTTTCTCTAATATTTAGATTTTTTTTGTTTGT ACTTCCCACTTCTGTTTGTTCGGTTTAATATAATGTTTCTTTTGCCTCTTCAAACACAGGAAGAAATACGAGAAACTCCG CAGACAATGCCGGCAACTGCTAAAGTCTAGTGGGAGCTTTAAGTTTGATGAAATAGGTGAAATCAGCTATGAAGGTGATG GTGGAAGTCTTGTTCAAGATTCTGGTTCTCCTAGTTCTGAAGATGCAACAAGTGCCAGAGAGTCCCTTTCTAGTGCGGAA CATAGCCCAGATGTTGAATATTCAGATGATCCATCTAGAGGCCTCTTGGAAGGGGATGATGCTACTAACATCGGCAATGC TGATGCCTCTACACTGGATACTGATTCCACTGATTCAGACTCCTCTGAAAGTCCTGAGGTAATTCAGACATTTCCTTCTG ATGAGGGTCCGGAAGAGAATGATTCCAGGACAGTTTCTAAGGAAAGTTCTTCTCCCTCTCAAATGAAAGTCCCATCCAAA CTACGAACTAATGAAGACTTCGCCACATGGCAACGGATCATCCGGCTTGATGCAGTACGTGCCAATGCAGAATGGATGTC GTACAATCCCACCCAAGCTGTTGTACCGGAGAGTAGGGCACGTCGTTCAGCTGAGGCTGTTGGCTTGAAGGATTATGGTC ACCTAGAACCTGGCAGAATCTTTCATGCTGCTCGACTAGTTGCTATCCTTGAAGCATATGCACTGTACGACCCTGAAATT GGCTACTGCCAGGGTATGAGCGATCTGCTATCTCCCATTATTAGTGTTATGACCGAAGATCACGAGGCTTTCTGGTGTTT TGTTGGATTTATGAAGAAGGCTAGGCAGAATTTCAGGCTTGATGAGGTGGGTATTAGGAGGCAACTTGATACAGTTGCAA AAATAATCAAATTTAAGGATGGCCACCTGTTCAGGCATTTGCAGAAGCTCCAGGCCGAGGATTGCTTTTTCGTATATCGG ATGGTGGTTGTATTGTTTAGAAGGGAGTTGACATTTGAACAGACTCTTTGTCTTTGGGAAGTAATGTGGGCAGATCAAGC AGCAATAAGGGCAGGTATTGGAAAATCAGCATGGAGCAGAATCAGGCAGCGCGCCCCGCCAACAGATGATTTGTTGCTTT TTGCAATAGCAGCTTCAGTGTTACAGAGGAGGAAATTGATCATTGAGAAGTACTGTAGCATGGATGAGATCATTAAGGAA TGCAATGGCATGGCAGGACATCTTGATGTTTGGAAGCTGCTGGATGATGCCCATAACTTGGTGGTCACCCTTCATGACAA AATGAAAATAGAGGCATCATTCTGATGACTGCAGTTGTTAACTGATAGCGCTTGGTTTTCCGGTGGGAAATACCATAATC ACTTATGAAGAGAAGTTTCGAAGTGTTACTTCTGGAATTACGTGCTTTGGATTGTGTCACCACCAATCAAAACACATAGA AGTTACAAAGTGTTACTTCTGGAGTAACCGTGTTTTGGATTGTGTCACCGCCAATCAAAACATGTTACCGAACAAGCTAG TTTAAATATTGTCAGAAGATAGTTATTTTCAGACCGTCAGGTTTCTCCTTTGCATCTAAAAAATAAGCACTGCAAATACT TGGTTTGTTACAACGAAGCCTGCAGCTTGCTGAAATTTGCCACTTCATATTTATGACAGTGTGGAGATTGAAGTAAACTA CTACTACCTAGATTTACTTGCTTCTTTTTTATTTATTCTTCTCTGTTTGGCTCCACCTTTTTCTGTTTTTGATTTTGATT TGAGAATTGAGACACATCTATGAGCACACCTTTCCATAAAGCAGGTGGGTAGGTGCATGTAACTGTTAGAAGAGGCTGAG AGGCATTGACAATTATGAAATGTTGTCCTTTTTGACTGAATCTGAACTCATGAATCCTTTGACTCTTTTAGGTGCTGACC AAGTTACAGGTCATGCGAGTTTGAGAGGATCAGAGGATTTCATTGGGATATGTAGTTACTTTAGGGGTACAAATCAATGG CCCCATAATTTGGCCACTAAGCTTATTTAACGTGCATAACACCCTGCTCTAATGGTAGCCGCATAAATTTGATTGTCATA CTTTGGCAATTTAGTTTATTAATCGGCCTAGGTTTGTTGTGGATTGCTTCTTTTCGTGCCATATGTCTTATCTAATAACA CTCTTTCACATACTATTTTATTCATTAAACTTAATGAGACCTATTAAATTGATAGTGAGTCCTATATACTTTAGCCGAAC GTGGAATCAATAATAGAGAAAATTACACCAAAATAATTATAATAGAGGAAATGGTTGAAAACGTGTTAAAGGGAGCGTTG ATTGTTTGATATTTGGACGCCAAACAACAACCTTGACAGCTGCAACAACACCACGATAAGAACCTGGAACAAAACAAGCT GAGTTGCGAAAATCAATTCGTTGTATTTGGGTAATAAAAATGAGGCTTTATAGTTTCAAGGTAGGCAAACACATTCAACA AAAACAGAGATTTTAAGGCTGGACGGTGAACATGTGAAAAATAAGGAGTTTTCAGGTAAGGTGCAAAAATAAAAGAAAGT TTCAGCAAAAAAACAAGCCTGGCCCAGGCGGGGGGTGGG
CDS sequence (LotjaGi1g1v0292900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCCTCTTAGGCGAAGTATCAATTCAGCTTCGTCGTCTTCCAATTCCTCTCCTTCCTCATCGTCGTCGTCGCAATC GTCGGCGTCGTCGGTGTCATCATCATCATCTTCGTCGTCGTGGATCCATTTGCGTTCGGTTCTGTTTGTTGTTAGTTCTT CCTCACCAGCGTCTTGTTCCTCCACTGATCGGGGTCGTCTTAAATCACCATGGTCACGTAGGAAAAGAAAACACGCCCTT TCACCTCAGCAATGGAACAGCTTATTTACCCAAGATGGGAGAATTCGTGATGGTGGACTTAAGTTCCTGAAAAAAGTTCG CAGTGGAGGTGTTGAACCTAGCGTAAGAGCTGAAGTTTGGCCTTTCCTACTTGGAGTCTATGACTTGGACAGTACCAAAG AAGAAAGAGATGTTATAAGAACTCGAAATAGGAAGAAATACGAGAAACTCCGCAGACAATGCCGGCAACTGCTAAAGTCT AGTGGGAGCTTTAAGTTTGATGAAATAGGTGAAATCAGCTATGAAGGTGATGGTGGAAGTCTTGTTCAAGATTCTGGTTC TCCTAGTTCTGAAGATGCAACAAGTGCCAGAGAGTCCCTTTCTAGTGCGGAACATAGCCCAGATGTTGAATATTCAGATG ATCCATCTAGAGGCCTCTTGGAAGGGGATGATGCTACTAACATCGGCAATGCTGATGCCTCTACACTGGATACTGATTCC ACTGATTCAGACTCCTCTGAAAGTCCTGAGGTAATTCAGACATTTCCTTCTGATGAGGGTCCGGAAGAGAATGATTCCAG GACAGTTTCTAAGGAAAGTTCTTCTCCCTCTCAAATGAAAGTCCCATCCAAACTACGAACTAATGAAGACTTCGCCACAT GGCAACGGATCATCCGGCTTGATGCAGTACGTGCCAATGCAGAATGGATGTCGTACAATCCCACCCAAGCTGTTGTACCG GAGAGTAGGGCACGTCGTTCAGCTGAGGCTGTTGGCTTGAAGGATTATGGTCACCTAGAACCTGGCAGAATCTTTCATGC TGCTCGACTAGTTGCTATCCTTGAAGCATATGCACTGTACGACCCTGAAATTGGCTACTGCCAGGGTATGAGCGATCTGC TATCTCCCATTATTAGTGTTATGACCGAAGATCACGAGGCTTTCTGGTGTTTTGTTGGATTTATGAAGAAGGCTAGGCAG AATTTCAGGCTTGATGAGGTGGGTATTAGGAGGCAACTTGATACAGTTGCAAAAATAATCAAATTTAAGGATGGCCACCT GTTCAGGCATTTGCAGAAGCTCCAGGCCGAGGATTGCTTTTTCGTATATCGGATGGTGGTTGTATTGTTTAGAAGGGAGT TGACATTTGAACAGACTCTTTGTCTTTGGGAAGTAATGTGGGCAGATCAAGCAGCAATAAGGGCAGGTATTGGAAAATCA GCATGGAGCAGAATCAGGCAGCGCGCCCCGCCAACAGATGATTTGTTGCTTTTTGCAATAGCAGCTTCAGTGTTACAGAG GAGGAAATTGATCATTGAGAAGTACTGTAGCATGGATGAGATCATTAAGGAATGCAATGGCATGGCAGGACATCTTGATG TTTGGAAGCTGCTGGATGATGCCCATAACTTGGTGGTCACCCTTCATGACAAAATGAAAATAGAGGCATCATTCTGA
Protein sequence (LotjaGi1g1v0292900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNPLRRSINSASSSSNSSPSSSSSSQSSASSVSSSSSSSSWIHLRSVLFVVSSSSPASCSSTDRGRLKSPWSRRKRKHAL SPQQWNSLFTQDGRIRDGGLKFLKKVRSGGVEPSVRAEVWPFLLGVYDLDSTKEERDVIRTRNRKKYEKLRRQCRQLLKS SGSFKFDEIGEISYEGDGGSLVQDSGSPSSEDATSARESLSSAEHSPDVEYSDDPSRGLLEGDDATNIGNADASTLDTDS TDSDSSESPEVIQTFPSDEGPEENDSRTVSKESSSPSQMKVPSKLRTNEDFATWQRIIRLDAVRANAEWMSYNPTQAVVP ESRARRSAEAVGLKDYGHLEPGRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPIISVMTEDHEAFWCFVGFMKKARQ NFRLDEVGIRRQLDTVAKIIKFKDGHLFRHLQKLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRAGIGKS AWSRIRQRAPPTDDLLLFAIAASVLQRRKLIIEKYCSMDEIIKECNGMAGHLDVWKLLDDAHNLVVTLHDKMKIEASF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| MobiDBLite | 1 | 40 | 40 | - | – | |
| PANTHER | 29 | 552 | 524 | 4.2E-218 | – | |
| PANTHER | 29 | 552 | 524 | 4.2E-218 | – | |
| MobiDBLite | 52 | 77 | 26 | - | – | |
| MobiDBLite | 52 | 66 | 15 | - | – | |
| SUPERFAMILY | 93 | 430 | 338 | 5.49E-40 | ||
| SMART | 107 | 496 | 390 | 4.3E-27 | ||
| ProSiteProfiles | 110 | 470 | 361 | 31.191 | ||
| MobiDBLite | 175 | 286 | 112 | - | – | |
| MobiDBLite | 180 | 202 | 23 | - | – | |
| MobiDBLite | 203 | 220 | 18 | - | – | |
| MobiDBLite | 228 | 253 | 26 | - | – | |
| MobiDBLite | 270 | 286 | 17 | - | – | |
| Gene3D | 333 | 396 | 64 | 4.6E-12 | – | |
| Pfam | 349 | 470 | 122 | 1.4E-30 | ||
| Gene3D | 406 | 553 | 148 | 3.8E-20 | – | |
| SUPERFAMILY | 407 | 545 | 139 | 1.88E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0292900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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