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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0302100 |
| Transcript ID | LotjaGi1g1v0302100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Unc93-like protein 2; TAIR: AT1G18000.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q56WD3|UN931_ARATH UNC93-like protein 1; TrEMBL-Plants: tr|G7J9N9|G7J9N9_MEDTR MFS transporter; Found in the gene: LotjaGi1g1v0302100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:73634922..73636833) extracted from Lotus japonicus Gifu genome v1.2.
AAAATGGGTACCTCTGGATATGAAGAATCAGGTACCCAAATGCCTGAAACCACAAAAACTTCTTCCCTTTTCCGATACAA TTCACCTTTCGTTCAGATCGTCCTTATTGGTTTCGTCTGTTTCTGCTGCCCCGGCATGTTCAACGCCCTCTCCGGCATGG GTGGCGGTGGCCAAGTCAATCCCACAGCCTCCAACAACTCCCTCACTGCTCTCTACACCACCTTCGCCGTCTTCGGCATC CTCGGCGGTGGCATCTACAACATCCTCGGCCCCCACCTCACCCTCTTCGCCGGTTGCTCCACCTACGTCCTCTACGCCGG TTCCTTCCTCTACTACAACCACCAGCAGCACCAAATGTTTGCAATAGTCTCCGGCGCGCTTCTCGGGATCGGAGCAGGGC TGTTATGGGCGGCGCAGGGTGCTATCATGACATCTTACCCGCCGGTGAACAGAAAAGGCACTTATATTTCTATTTTCTGG AGTATTTTCAACATGGGTGGTGTGATTGGTGGGTTGATTCCTTTCATTTTGAATTACCACCGTGGTGATTCTGCTGCTAC TGTGAGTGATGGAACATACATTGGTTTCATGGCGTTTATGTCACTTGGAGCTGTTTTGTCACTGACCATCTTGCCGGCGA GTAAGGTTGTTCGTGATGATGGGACTAGATGCACCAACATGTTGTACTCCAATGTGTGGAGAGAGTGTGTGGAGATTCTG AATTTGTTCTACAACAAGAAGATGCTTCTCATGCTTCCTGCTGCTTGGGCTAGCAATTTCTTCTACACTTATCAATTCAA TCATGTGAACAAGACACAGTTCAATTTGAGGACAAGGGGTTTGAACAATGTGTTCTATTGGGGAGCACAGATGTTGGGGT CTGTTGGGATTGGTTACATAATGGATTTCAGTTTCAAGAGCAGGAATAAGAGGGGGATTGTGGGAATTAGTGTGGTTGCT ATTCTGGGATCTGCTATTTGGGGTGGTGCACTTGCTAATCAGATTAAACACCAAAAAGGGGAGATCTTGGATTTTAAGGA GTCAGGTTCTGGCTTTGCTGGACCCTTTGTCTTGTACTTTTCTTTTGGTTTGCTGGATGCCATGTTCCAGAGTATGGTGT ACTGGGTTATTGGAGCTCTGGCTAATGATTCTGAGGTTCTTAGCAGGTAACTATAAATTGCAAAGCAGCATCTGTTATAT TCATAACATGTTTGGATTGCTTCTCTTTCCTTACAATTAATTCTGGTACCCCAAAGTTGTGCATGTTTGGTTTTCAGTTA AAAACCACGTTTCCCAACCTTGAATTCCAAGGGCCCTAACGTGAAACAGGCTTATGACCGCCGCCCTGTGGCATTCAGTT GAATGAGTTCAACTGAAAACCAAACATGCTTTCAGAATTGATTTTGGTTTTGGAAAGGATTTCAAAACATGCACTCAATT GTTTGGTTAATTATTCTATTTGTGACTGTCTTAGCTTTTAGTCAGTGAAAATTTGTGATTGATCAACTATTAGTATGTTT GAGTGAGCTTTAATCAATTATGGCACACAAAGCTGCTCAGAAAAGCTTCTTCTCATAATTGACTTTGGCTTTATGATCAA TTTTCGAAAGATTATCAGATATAGCATTATGTTGTTCTTACTTGAAATTTGGTAATCAATTCACCTATTGTTTACAGGTA CACTGGATTCTACAAAGGGATACAAAGTGCTGGGGCAGCAGTTGCATGGCAAATTGATAACCACAATGTGTCCCCTATGT CCCAATTGATTGTGAATTGGGTGCTCACTACAATAAGCTATCCTTTACTATTGGTTCTAGTAGTGATGGCAGTGAAAGAG GATGAGAATGCAGTAGATGAACCTGTCAAACAAGTTGCTCCTTCTTCTGCTTACAATGACTCTGTCCAATAG
CDS sequence (LotjaGi1g1v0302100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTACCTCTGGATATGAAGAATCAGGTACCCAAATGCCTGAAACCACAAAAACTTCTTCCCTTTTCCGATACAATTC ACCTTTCGTTCAGATCGTCCTTATTGGTTTCGTCTGTTTCTGCTGCCCCGGCATGTTCAACGCCCTCTCCGGCATGGGTG GCGGTGGCCAAGTCAATCCCACAGCCTCCAACAACTCCCTCACTGCTCTCTACACCACCTTCGCCGTCTTCGGCATCCTC GGCGGTGGCATCTACAACATCCTCGGCCCCCACCTCACCCTCTTCGCCGGTTGCTCCACCTACGTCCTCTACGCCGGTTC CTTCCTCTACTACAACCACCAGCAGCACCAAATGTTTGCAATAGTCTCCGGCGCGCTTCTCGGGATCGGAGCAGGGCTGT TATGGGCGGCGCAGGGTGCTATCATGACATCTTACCCGCCGGTGAACAGAAAAGGCACTTATATTTCTATTTTCTGGAGT ATTTTCAACATGGGTGGTGTGATTGGTGGGTTGATTCCTTTCATTTTGAATTACCACCGTGGTGATTCTGCTGCTACTGT GAGTGATGGAACATACATTGGTTTCATGGCGTTTATGTCACTTGGAGCTGTTTTGTCACTGACCATCTTGCCGGCGAGTA AGGTTGTTCGTGATGATGGGACTAGATGCACCAACATGTTGTACTCCAATGTGTGGAGAGAGTGTGTGGAGATTCTGAAT TTGTTCTACAACAAGAAGATGCTTCTCATGCTTCCTGCTGCTTGGGCTAGCAATTTCTTCTACACTTATCAATTCAATCA TGTGAACAAGACACAGTTCAATTTGAGGACAAGGGGTTTGAACAATGTGTTCTATTGGGGAGCACAGATGTTGGGGTCTG TTGGGATTGGTTACATAATGGATTTCAGTTTCAAGAGCAGGAATAAGAGGGGGATTGTGGGAATTAGTGTGGTTGCTATT CTGGGATCTGCTATTTGGGGTGGTGCACTTGCTAATCAGATTAAACACCAAAAAGGGGAGATCTTGGATTTTAAGGAGTC AGGTTCTGGCTTTGCTGGACCCTTTGTCTTGTACTTTTCTTTTGGTTTGCTGGATGCCATGTTCCAGAGTATGGTGTACT GGGTTATTGGAGCTCTGGCTAATGATTCTGAGGTTCTTAGCAGGTACACTGGATTCTACAAAGGGATACAAAGTGCTGGG GCAGCAGTTGCATGGCAAATTGATAACCACAATGTGTCCCCTATGTCCCAATTGATTGTGAATTGGGTGCTCACTACAAT AAGCTATCCTTTACTATTGGTTCTAGTAGTGATGGCAGTGAAAGAGGATGAGAATGCAGTAGATGAACCTGTCAAACAAG TTGCTCCTTCTTCTGCTTACAATGACTCTGTCCAATAG
Protein sequence (LotjaGi1g1v0302100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTSGYEESGTQMPETTKTSSLFRYNSPFVQIVLIGFVCFCCPGMFNALSGMGGGGQVNPTASNNSLTALYTTFAVFGIL GGGIYNILGPHLTLFAGCSTYVLYAGSFLYYNHQQHQMFAIVSGALLGIGAGLLWAAQGAIMTSYPPVNRKGTYISIFWS IFNMGGVIGGLIPFILNYHRGDSAATVSDGTYIGFMAFMSLGAVLSLTILPASKVVRDDGTRCTNMLYSNVWRECVEILN LFYNKKMLLMLPAAWASNFFYTYQFNHVNKTQFNLRTRGLNNVFYWGAQMLGSVGIGYIMDFSFKSRNKRGIVGISVVAI LGSAIWGGALANQIKHQKGEILDFKESGSGFAGPFVLYFSFGLLDAMFQSMVYWVIGALANDSEVLSRYTGFYKGIQSAG AAVAWQIDNHNVSPMSQLIVNWVLTTISYPLLLVLVVMAVKEDENAVDEPVKQVAPSSAYNDSVQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 457 | 457 | 5.3E-229 | – | |
| PANTHER | 1 | 457 | 457 | 5.3E-229 | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| Gene3D | 27 | 218 | 192 | 1.4E-10 | – | |
| Phobius | 29 | 49 | 21 | - | – | |
| CDD | 30 | 441 | 412 | 0.0 | – | |
| TMHMM | 32 | 54 | 23 | - | – | |
| SUPERFAMILY | 33 | 438 | 406 | 3.53E-25 | ||
| Phobius | 50 | 68 | 19 | - | – | |
| Pfam | 56 | 177 | 122 | 1.6E-14 | ||
| TMHMM | 67 | 89 | 23 | - | – | |
| Phobius | 69 | 88 | 20 | - | – | |
| Phobius | 89 | 93 | 5 | - | – | |
| TMHMM | 93 | 112 | 20 | - | – | |
| Phobius | 94 | 111 | 18 | - | – | |
| Phobius | 112 | 117 | 6 | - | – | |
| Phobius | 118 | 137 | 20 | - | – | |
| TMHMM | 119 | 141 | 23 | - | – | |
| Phobius | 138 | 156 | 19 | - | – | |
| TMHMM | 156 | 178 | 23 | - | – | |
| Phobius | 157 | 178 | 22 | - | – | |
| Phobius | 179 | 189 | 11 | - | – | |
| TMHMM | 190 | 212 | 23 | - | – | |
| Phobius | 190 | 210 | 21 | - | – | |
| Phobius | 211 | 246 | 36 | - | – | |
| Gene3D | 240 | 447 | 208 | 9.1E-7 | – | |
| Phobius | 247 | 263 | 17 | - | – | |
| TMHMM | 248 | 267 | 20 | - | – | |
| Phobius | 264 | 282 | 19 | - | – | |
| TMHMM | 280 | 302 | 23 | - | – | |
| Phobius | 283 | 300 | 18 | - | – | |
| Phobius | 301 | 311 | 11 | - | – | |
| TMHMM | 312 | 334 | 23 | - | – | |
| Phobius | 312 | 334 | 23 | - | – | |
| Phobius | 335 | 354 | 20 | - | – | |
| Phobius | 355 | 376 | 22 | - | – | |
| TMHMM | 355 | 377 | 23 | - | – | |
| Phobius | 377 | 418 | 42 | - | – | |
| TMHMM | 418 | 440 | 23 | - | – | |
| Phobius | 419 | 440 | 22 | - | – | |
| Phobius | 441 | 465 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0302100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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