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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0308700 |
| Transcript ID | LotjaGi1g1v0308700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter-related family protein; TAIR: AT1G06890.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890; TrEMBL-Plants: tr|I1JYA8|I1JYA8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0308700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:75013431..75019169) extracted from Lotus japonicus Gifu genome v1.2.
AAAGGACAATAACCCACATGAGCTTGATCCGTGTCTGCTGATTGGAATTGGAACGGAAGCCTTGAATCATGGTCAATTAC CAAACCCCCCATATCCCTGTTTTTATTTCTTGTTGTGTCACCAGTTCATGTGCAACCGCGTTCTGATAAATTAATAATAA TAATTCACATTCACCTCTGCATCACAATCACAATGCTCTTCCTCCTCACACCCATCACTGATTTTCCAAACATTCCAATC TTCAAACGTTGTTGATTCCTTCCATTGTTGATCACTCACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT TTCTCTTTCTCTCTCTACCCAAAACCATTGATTCGATCTGAATCTGTGTACTCTGCTCTCACAAATCGCAAACCCCCTTT ACTCAATTTCCTCCCTTTTTCACTCCTGTCTGCTTTTGGGTGGGTAAAGTTGTTATTTTCGTTTCTGGGTCTGTCTGATT CTACTTTTTTTTCCCGATAATCTGTCGTTTGTTGTCTGATTCCGTTTCTGACGTTTTGTGTTTCTATTTGTTTCGGTTTT TTCAGGTATTCAGCAAAGACAAAGATGGGTGAGGGAGAACGTTTCCAGCTGGGGACTGTTGGCGCCTTGAGTCTTTCTGT GGTGTCATCAGTGTCCATTGTGATTTGCAATAAAGCTCTCATGAGCTCACTCCATTTCATTTTTGGTAAATTCATATTTT TCTTTGTTGGCTATTTTGTGTATGTACCTGTCTTTTACTATCAGATTTGTTCTGTTAGCTTCAAGAAGTCTTGTCTTGTG TTGTGTGATTTGTTATGTTATTAGAATTGAAGGTTTTGAAACATAGCCCTCCATTCCCTCTTGTATGTTTTGTTGGAGAT TGCTCCATTGTACTTGCTGCTACCCTATTCTGTGCAGCTATGTTGTGCCAGTTGTCTAGGCAAAGTGCTCACATGAATGA ACTTTAGGTGGGAATTTTGTAATGAAAACTACGTTATACTTGCTTGGTTAAACATGAACATGACTAGGTAAAAATTAAAA ATGACTTCATTTTCACTCTTGGTTAACAATCATTTTCCCTCAACTAAACCAACCACACCTTAGTAAAATTAGAGGCAATG ATTGGAGATTGGATTTGTCGAATTTTACAATTTCTCCTTTGGCTTTACTGCTGGAATTTAATTTCCTAGATACTATTCAT GGAAATGTGACTCAATTTGTCAGTATCCCTTTTTTCTAATTAAATACTGTCTCGTTGAAAATATAAATCGTTGTCGTATT CGTTATTTGCTACCGAGTTGAGGACTTTGTCCTCCTTCCCCAAATTAATATTGCAATTAAGTGATGTGAATGATATATAA GTTGCATCATAAAGAATAATTAGTGATTCGATTTTCGGAAGTGCCTGAACATTAGACATCGCTTAACATAGTTCACTTAT TAGTTTACCAATTTTCAGTCCTAATCATGAAGAAGGGAAAATTATCACCTCGGAAGTGGGGTGTATGCTGGTTTGGGTTA TTTCAATGATATATGCAAACTTGAGCTCCCCATTTACATTCAAATTAATTGTATATTAGTTACATACTTACATGACATGT TTTTGAAAATTGTCTTCTGGTCATGCAGCTACAACTTTGACAAGCTGGCATCTGCTTGTCACATTTTGTTCCCTTCATGT AGCGCTTAGAATGAGATTCTTTGAGCACAAACCTTTTGAGCAGAAAGCTGTAATGGGATTCGGGATTTTAAATGGAATCT CAATTGGTCTTTTAAATTTGAGCCTGGGGTTCAATTCTGTTGGCTTCTATCAAGTATGGTTGTTGTTGTGAACTTGTGAT TCTGTTTTTCTCATGTGTTAATTTGATTTTTGTTGACTTTGAATGCCTCTGATGTTTCTACTCAGATGACTAAGCTGGCA ATCATTCCTTGTACTGTACTGTTGGAGACCATTTTCCTCGGGAAGAGATTCAGGTTCCATTTAGCTTCCTATCAATTCAA TGGTTTTTATGAATGGTTTTCAATATATACGATATATCTTGTAATTAATTACACAAAGGTCCATGAAAGAATTGTCTTAT TGTACTACCTTTTGTTTTCTTTTTGTTCTTCCTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCAGCTCATTGCTTTG ACCTGAAGTATCAACGTATCCTGTAGTCACGCAGCCGTGCTCATTTTTACTGTCATACCATACCTTTAAGTGTTTCCATT AATTGTAAACTATATTAATTATCTTTTCATTCTCATTGCAGTAAAAGAATTCAATTTGCCCTATCTACCCTCCTTTTGGG TGTTGGGATTGCAACTGTCACTGATTTGCAGCTTAATGCTCTGGGCTCTTTCTTATCTTTCTTGGCGGTGATTACAACAT GTGTTGCTCAGATTGTATCCTTAAAATAACAAATTGTTCCTATTAGCACCTAAACTTTTTAGCAGTAATGTGAGATAAGT TTTGTGATAGATTGAAAAGAAGTGGGGCCCATTTTTGAACTTGTTCCTCAATGCACTATTTCTTAAATCTTAGCCATGTG AAATGGTTCTTGAAGATATTATGCTGCTAACTATGTAGAGAAAGAAATATCATGCTTTTCCCTGGGGATAAACTTCTGCA GGGAGTAAGGTACATGGACTAGGTGAAGAACTAATGATATTCCTAAATTTGTATTTTTAGGTTTTCTTGTGTGAAATGAA GGACCCCCACCCTCCCCTTCATTTTTGCCTGGAAGCTCTCTTGTCACTTTGCGTATGTTTGGATGAGTCCAGTTTCTTTA TCTAGATGCTGATTTTCATGTTATGTCATCTGAACATAGTTAGTAGACATATGTCTTTTTATTGCATGCAAAAGCTTTAC AATGATGATTGTCTGATTTTTTTCATGGCCGATCAACCTTTTCTTTTTGTCTTATCCTTAATCAGCTGCTTTCAGATGAC TAATACTATCCAGAAGAAGTATAAGGTTTCTTCCACCCAGCTTCTGTATCAATCATGTCCATATCAAGCAGCAACCCTGT TAATCTGTGGTCCATATCTGGATAAACTTTTGACAAACCTGAATGTATTCGCTTTCAAGTACACAACTCAAGTGACGGTA AGAGTTAAAAAGTTTTCTTTATCTTTTTTCTTTTTGGCCCCAGCTCCTTGCTTTCTCTTACATTTTCTTCTTTTCTTCTT TGTGTGTCACAGGCATTCATAGTTCTTTCCTGCCTTATCTCCATCTCTGTCAATTTTAGTACATTTCTTGTTATTGGAAA GACATCTCCAGTCACCTATCAGGTTCTTGGACACCTCAAGACATGCCTCGTATTGGCATTTGGTTATATTTTACTCCGCG ACCCATTCAGCTGGAGAAACATACTGGGTATTTTGGTAGCCATGATTGGAATGATTCTATATTCTTACTATTGTTCTCTT GAAAGTCAGCAAAAAGCAGTTGAAGCTGCAGCACAAGCATCCCAGGTTTGTTTTACCCAACTAAATTAGCTTATCTTTCC TCATAATCTATTCTGACACCCAGAAGCTACTCATAGAAGTTTCCTCCAAATTTGATTTTGGCTTCCAAACATGCACGAAC TTTACGTGTCTTGAGTCTTTGCTTTATTAATTACTACATGAACGGTTTGTGATCCCGTTTCTTGTTGATGTTTACAGGCA AGAGAAGCAGAATCTGATCCTCTCATTAGTGTGGAAAATGGAAGTGGAGTTGCGAGCGACTCAGTTGGACAAAAGTCCAC TGTATGGAGCAAAGACAGAGACTAGTAAGCTTATGGGATTTGTTAAATTATTGTCAAGAACCGTTATAGTCCTTATAGAG GGTGAACACCCATAATCCTTATGGAATTAGGAAGTGTTGCCAAACGCAAGTGAGCCTCATTTGTTTTTCTAGGTAGCATT ATTCTAGTATTTCATTAATCATTTGCCAACCAGGAACCAGCAGTAGTAGGGAGGGGAACAATTACATATTTACATGGTCA TGTCGTAATTCTATTGGCCACAAATATGCCTAATAGTAACTAACATTTCATGGTGATGTTTTTACATAATGTTACATTTA TAATTTGATATACATATTTAAACTTTTTTCTCTCTCATGAGTAACAGCATATCATAACCATCTACTGTTGGGAAGCCAGA GAAAGAAGGTGAAAGAAATGACAATGTTTTATCAAAAAAGAATTGAACAATTAACTCTCAAACTAACAATTGTGCAGAAG GCTCTCTCTAATCTGATTTACCCATATATATATATAGCTAATGCCCTTCTGCTACTAACCAACTACCTTAACAACGTCTA ACTACTATAAAAGCCCCTAACTAATTTTCCCTTCTCTTACATCCTAACATCTACTGGTAATTCTCTGTCCTTCTCTTTCT CTCTGATTTAGTTATCTCTCTAATTTATTCATATATCACAAAGTGCTAATTTCTTCTATGTAAATAGAGATTTTTCAGAA ATAATTATGATCTGAGCTCTATTTATCATAAAAGGCACAGTTCCTAATGTCCAGCAATCAAGCTGGACATTAGGAACTGA AAAAGAATAAACTCTCAAACATTTGTTAATATTCAAATCTGCCTCAAGAAGAATAATTGTGCACTTGTCATATATTCTGC TTTTGCAATACTTATTGCAAAGATATTTTGCTTCTTGTTTCTTTGAGTCACAACATTGCCCCCACAGTTTGATGCAATAA CTAGTTGCTAATTTTGCTTCTTCTACAAAACCTGCTCAATTTGCATGGGCATAGCATTCAAACCCTCAGTCATTATTATT TTTTGAATGGCATTCCCTTGGCATGAATCCTTTTTAAGTAACCAAGGATCTGATTTATAGCTTCTGAATGTCTCTTAGTA GGAGAATACTTTAACAGACACACTACACTTTGATTGTGAGCAATGTCAGGTCAAGTGAGATGCAAGCAGATTATTTTTCC CTCTCCAAAGAAGGATCTTCTTCATTAATTGTGTTTCTATTGTCTATCTTGGATACTATTCTATTGAAAAAATATTCTCT TTGGACAGACTACCCAATTTTAAAATGTCTTTGTCGTGGTGGAAGTCTTTTATGGTTATGGTGGAAGTTGTCTAAAGGAA AAAATGGGCCTTCATGTTTTTATTTTATATTTGGGCTCAATTATGTGGCACTTTACTTGCTTAATCGTGACACGTTTCTG AATAGAAGAATAATACTCCTAATGTCATGGTCATTGGCATATTCTCCTGATGTGCTGTAACAGTCACACAGATGCTCCTT GTACAAGCTTGCACGTAGATACACTGCTTGACTACGTTCACTTCACTTGGCCATTTACACACGGTTTACACTTGTCCCTC GTAACTCCTTTATGGCTTAATAGCACTTTTGGTCCCCCACGAACACGTTTTGTGCAAAATAAGTCCCTAAACTTTAAAAA TAGCATTCTTGATCCCAAACGTTATACTCCGTTAACAGTTTTGGTCCCTCCTCACTTTTCCATCCAAAAACTGACGTTTT CTGGATTTTCCAGAAAATTCAATCACTTCTTCATCTTCTTCATACAACCTACCATCATCTTCATCATATTCTTCAAACCC ATCACTCTCACCTCATAAATTTGGAAACTTTTTGCATTACCCTCATATCCAACATATTCAGACTCTCTCTCGATCTCTCT TTCTCATCACATCCTCTTCTCCTTCCTCCAATAGCAGCCACGTAAAAAAAAAAATCGAA
CDS sequence (LotjaGi1g1v0308700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGAGGGAGAACGTTTCCAGCTGGGGACTGTTGGCGCCTTGAGTCTTTCTGTGGTGTCATCAGTGTCCATTGTGAT TTGCAATAAAGCTCTCATGAGCTCACTCCATTTCATTTTTGCTACAACTTTGACAAGCTGGCATCTGCTTGTCACATTTT GTTCCCTTCATGTAGCGCTTAGAATGAGATTCTTTGAGCACAAACCTTTTGAGCAGAAAGCTGTAATGGGATTCGGGATT TTAAATGGAATCTCAATTGGTCTTTTAAATTTGAGCCTGGGGTTCAATTCTGTTGGCTTCTATCAAATGACTAAGCTGGC AATCATTCCTTGTACTGTACTGTTGGAGACCATTTTCCTCGGGAAGAGATTCAGTAAAAGAATTCAATTTGCCCTATCTA CCCTCCTTTTGGGTGTTGGGATTGCAACTGTCACTGATTTGCAGCTTAATGCTCTGGGCTCTTTCTTATCTTTCTTGGCG GTGATTACAACATGTGTTGCTCAGATTATGACTAATACTATCCAGAAGAAGTATAAGGTTTCTTCCACCCAGCTTCTGTA TCAATCATGTCCATATCAAGCAGCAACCCTGTTAATCTGTGGTCCATATCTGGATAAACTTTTGACAAACCTGAATGTAT TCGCTTTCAAGTACACAACTCAAGTGACGGCATTCATAGTTCTTTCCTGCCTTATCTCCATCTCTGTCAATTTTAGTACA TTTCTTGTTATTGGAAAGACATCTCCAGTCACCTATCAGGTTCTTGGACACCTCAAGACATGCCTCGTATTGGCATTTGG TTATATTTTACTCCGCGACCCATTCAGCTGGAGAAACATACTGGGTATTTTGGTAGCCATGATTGGAATGATTCTATATT CTTACTATTGTTCTCTTGAAAGTCAGCAAAAAGCAGTTGAAGCTGCAGCACAAGCATCCCAGGCAAGAGAAGCAGAATCT GATCCTCTCATTAGTGTGGAAAATGGAAGTGGAGTTGCGAGCGACTCAGTTGGACAAAAGTCCACTGTATGGAGCAAAGA CAGAGACTAG
Protein sequence (LotjaGi1g1v0308700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEGERFQLGTVGALSLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALRMRFFEHKPFEQKAVMGFGI LNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETIFLGKRFSKRIQFALSTLLLGVGIATVTDLQLNALGSFLSFLA VITTCVAQIMTNTIQKKYKVSSTQLLYQSCPYQAATLLICGPYLDKLLTNLNVFAFKYTTQVTAFIVLSCLISISVNFST FLVIGKTSPVTYQVLGHLKTCLVLAFGYILLRDPFSWRNILGILVAMIGMILYSYYCSLESQQKAVEAAAQASQAREAES DPLISVENGSGVASDSVGQKSTVWSKDRD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 332 | 332 | 2.1E-208 | – | |
| PANTHER | 1 | 332 | 332 | 2.1E-208 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| TMHMM | 9 | 28 | 20 | - | – | |
| Phobius | 12 | 32 | 21 | - | – | |
| Pfam | 21 | 294 | 274 | 3.8E-18 | ||
| Phobius | 33 | 37 | 5 | - | – | |
| TMHMM | 38 | 60 | 23 | - | – | |
| Phobius | 38 | 62 | 25 | - | – | |
| Phobius | 63 | 73 | 11 | - | – | |
| TMHMM | 73 | 95 | 23 | - | – | |
| Phobius | 74 | 93 | 20 | - | – | |
| Phobius | 94 | 98 | 5 | - | – | |
| Phobius | 99 | 121 | 23 | - | – | |
| TMHMM | 99 | 121 | 23 | - | – | |
| Phobius | 122 | 127 | 6 | - | – | |
| Phobius | 128 | 145 | 18 | - | – | |
| TMHMM | 128 | 145 | 18 | - | – | |
| Phobius | 146 | 150 | 5 | - | – | |
| TMHMM | 149 | 171 | 23 | - | – | |
| Phobius | 151 | 173 | 23 | - | – | |
| Phobius | 174 | 184 | 11 | - | – | |
| Phobius | 185 | 204 | 20 | - | – | |
| Phobius | 205 | 223 | 19 | - | – | |
| SUPERFAMILY | 219 | 294 | 76 | 6.15E-6 | – | |
| TMHMM | 222 | 244 | 23 | - | – | |
| Phobius | 224 | 245 | 22 | - | – | |
| Phobius | 246 | 251 | 6 | - | – | |
| Phobius | 252 | 271 | 20 | - | – | |
| Phobius | 272 | 276 | 5 | - | – | |
| TMHMM | 275 | 297 | 23 | - | – | |
| Phobius | 277 | 296 | 20 | - | – | |
| Phobius | 297 | 349 | 53 | - | – | |
| MobiDBLite | 317 | 349 | 33 | - | – | |
| MobiDBLite | 327 | 341 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0308700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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