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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0313400 |
| Transcript ID | LotjaGi1g1v0313400.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter-related family protein; TAIR: AT4G09810.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2; TrEMBL-Plants: tr|A0A1J7FMQ8|A0A1J7FMQ8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0313400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:75784398..75791626) extracted from Lotus japonicus Gifu genome v1.2.
ATATTATTACCTTAATGAACATGGCGTTTACTCTGGTGATGCTACTTTCTCCGCAACTCACTTCTTTTCTTTCCTTTTCT TCGATCGATCGATCACTGAATCTGGACGTTACATTACAAAAGCACCCAACACAAACACAAAACTCCATTTTATTTATAAC CCAACCCAACCCAACCAACGAGAGAACAAGCAGAGAGAAGCGCTTCAACTCTCTTTGCTTTTCTCTCCATTCAACTCTTC TTCTTCTTCAAAACGGTGCGTTTTCTCTGAATGCGTTTTTCTGTTTTTGATTCTTATGCTCGATTAGGGATCGCAGATCT GGGTTTTCGATTCGATTTGATTGTTACTTTTTGCTCAAGTTATTATTTCTTATGCTTTCTGAATTGTTGCAATTTCGTGA TTTCGACCTGTTTCAAGTTCGAATCTGCTGTGATTTGCTTTGTATTGTGGTGCGGAGTGATGGATCTGATATGAATTTTG CTGATTTGGTTTGATTTTGCTGGTTTTTGGTTTTAATTAGCTGAACTGTTTGTGTGTTTGAAGATGTTGAATTTTCATTG CAGTTAATCATGGTTCACTCACTGTGTATGTAGTTGACTTCAATGCTCATGTTGCTGGGTCTTTTTTTTCCCCTTTTGTG ATGTTTGAACAGAAAATGGAAGAGATTCTCGTAAGAAATTCAGAATCAATTATGATAGATGTTTCATGCATATGGATATA TGCTGATACTGTTTACTTGGTCTAGGTTGTTTATTTGCCCCTGCCCTGGAGTGTTTTCTAATTCTGTTTTGAATCCTGCC AATGAGTGCCCTGTGCAAATTGGTTAGAAAATCAAGAAATAGAAAGTTTTTTTTTTATTGAAAGTACCTAAGTTAAATGT ATTGGTAAAATGAAATGTTGCACTCTTCAATAAATAATTACATTTTTTAATTCCTTAATCACTGTTTTAGGACACTCACT TCTTTTTTTTAGGGACCTTTCTTTTTTTGTTTTGCCTTTTCTGTGAAATGTGAAGCAGCATGGGTTTTTACTTTATCTAT ACTCATATGCTTGCTTCTTTTGATGATTCATGGGATTTTGAAACAATTGGTACATTTTTTTGCATTCAGGCTGAGAAGTT AAAAATCCAGTTTGTATATTGGAAGCTCTAGTTCAATATGTCGTCAGCAAGCAAGGGTGATAGGAAGGCTACCCTTGATG CATCGTCATGGTTGTTCAACGTGGTCACGTCTGTGGGAATAATCCTTGTCAATAAAGCCCTGATGGCTAAATATGGTTTT AGTTTCGGTATGACTTCTTCATGACTTTTCCCTTTTTCTTTCCCTCCATTAAATGTTTGTTTGGTCATACCTCTAATTTA AAAGATATCATGCTTCTCATCTATGTGTTGTTTGGATAAACTACCAATTTGGTGCATTCCTTTTTGGCTAGTAAGAAACA TGTATCATGTATGTATGTTTTTTGTGTTAATGGTGGAGAAAGATTTTTGCTTTAATAGACTTGATATATTCTGTGTATTT TTCACTTTGATATTACCAACTAGCATCCTTTTGGCTTTTATTGATGGTCTGCAGCATAAACTTTTCCTTGGATTTAAAAA TGCATGCATTATATCTTGGTAGTAGTTGAATAGCTGACAAGTTGGCATTGGTGATGCTGGTGTGAATACTATGTAAAATG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAATCTGAGAAGTTATGCTTTCATATCAT ATGCTGATGTTTCTCAGCCCGCACAAACTTTTTGTATTTGTGAAGTGAAATCCAATGTAAAAATGTGAGCAAAATCCTCA ATTTTTTCAATCCAAAAAACTGTTGTGATGTTACAGATGGACATTCGAAGTTTTCTCTAGGAAAGCCTTTTGAAACAACT CTTTCATTTGCCTGATTTTTAGTTTTGATATTGATTACAGAACTACTGTTCTTAATATATCCCAAAGCTAATCTTCCGAT GTGTCAAAAAAAGATATATATCCCAAAGCTACAACAGCTTTAAAGCACTGAGAATAGCATTGGATGATCAATTAAAATCT ATTAAATAACTAGTCAACCAAAGAATAATGTAGTTTATGGTTTCTTCTGATGTTACTTGTAAGGCTACAGATTGCTTCTA AACTTCTGCAATAGTCTTGAATCCTGACATTCTATATCATATCATGCTATTATGCAGCTACAACTTTAACTGGTATGCAT TTTGCCACAACAACCTTGTTGACGCTGGTTCTTAAGTCACTGGGATATATCACGCCCTCTCATCTTCCAATATCTGATAT CATCAAATTTGTATTATTTGCCAATTTCTCCATTGTTGGAATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTTTATC AGGTAACTTATGGGCTTTTTGTTATGAACTTTTTAACTCTCCTTTGACATAGATTAGTATTTATAATAATTTCTTCCTCT CATTATTATCAGATTGCTAAGCTTAGTATGATTCCAGTATCTTGTTTCCTGGAAGTTGTCTTGGACAATGTGCGATATTC AAGGGACACAAAGCTTAGTATTTTATTGGTTTTGCTTGGTGTTGCCATCTGTACAGTCACTGATGTCAGCGTCAATACAA AGGGTTTCGTAGCTGCTATAATAGCAGTTTGGAGCACAGCACTGCAGCAATATGTAAGTAGCACTACATTAAATATTGAA CCTTGGTTGGGAGATACAAACTGATCAATTTGAATTCCTTGCCATCAAGTAGTTCTAGATTGTTAAACATTCACTTTCAG GTTCATGATGCTCGTTGGTAACTTTCATGTTTGTAAGAATTAATCTTTTTATGTATCTATAAATGACAAATTGGAAGCCT GCAAAAAAATTTCTTTGTTTTTTTGCATTTTTATAATGAGCAGTATTCTCAGATGTATCATCTGGAGCAGAGTACAATAA GTTGTTTAATATTTCTAGCTCTACCTGTTTTATTTGGGTTTGACAATCTAGGTTTTGTTTGTGCAGTATGTGCATTTTCT TCAGAGGAAGTATTCTATCGGGTCATTTAACTTGTTGGGCCACACTGCTCCAGCACAGGCAGCTAGTTTACTGCTAGTAG GCCCCTTTCTGGACTATTGGTTAACAAACAAACGAGTTGATGCCTATGGCTATGGTTTGACATCCACTGTAAGTTCTCTT TCTCTTTCTAGTTTTCTTTTCTAATAAATGTTGAGTTATGAGAAGGGGGTAAGCAGAAACTTTTGAAATTTATTTAGTTC AGGTTTAGGCTGCTTTTTTCTTTTAGCTGTTAAGTTAATATTGAAATATTCGACCAAAAACAAAGTTAATATTGAAATAA GTTGTAAGACTAGGGACTAATCCTGCATCAGAGAATTGTGTGTGCCACTTGCATGGTGAATTTCATATTCATTATAAAAG ATCGCATTCTTTGTATTGCTTATTATTGAACTTGGTGCTAAGTTATACTGCCTAACTTCAGTCTCAGGTTCCTGAATGAT ATTAAGAAAATAACTTCTTGGCTTACTATGTCTAAGTCTAAGTTTTAACTTCGGTCACATTGCTTCACAACATACAAACT TTTCAATTTATAAGTCCTGTAAGCATTGCATGAAGCCAGAAGTTCTGGAAGCTTCCTTCCGTTAAGAACATTTCAAACCG TTGACTAAAAAGGACCAGTAAATAGCATTTGAAGTTCAAGGTGTTATATCCAATTCCAAACATGTTCATTCTTTTTATTA GGGTGAAATCACCTTTTCTTAACTAATGTATTCTTCTTTACCCTTCCCTTTTTTTAACTCGCTGTTGCATCTTACTAGTT AACTTTAGTTTTCCTGTTATACCATCTGTATGTAAAAAAATCATGCAGATTTGTGATTCTGAAAAGTGGCACATAATTAT TTCAAATCCACATAGATGCTGAATGTCAAGTTCTTTGTATTCTTAATATGACCAATCTAGTCTTAAAAAAATTACATTTT ATGAGCAATTTTTCTATTAAGATCTCTCAGATCATAACCCACAATCTGTAGGGGCAATTATCTTTGTGAATCATTACTTT CTTTTAAAATTTCTTGTATATTGAAGATTTTAATTAGATTGTATTATCTTGTTTTTATCTTGTGATCTCACTTATGAGTT CCTGGAGATTCTTATTTTATCTACCTTGTATTATGCTTCTATAATGATTTTAGCTTAGGAAGTTCTTTAGCAGTCCTATC CCTAGTGTACATGTAGAAAACAAGAAAGAGTCACTGTTGTTAAATTTGCTTACCTTTATACTGGCAGCATGCCAATAGCT CTTCTTTTTATTCATAAAAAACGATGTATGCTTGACAATTTGTACTTAAGTAGTTGCTCACAATTCACACTGTATTTGTG AGGATGCCTAGCCTTGGTCTACTTAGAACCAAATATTTTCTGGTTGTCAATTTGTTTTCTGGAAGATTTGGATTATGACC CATTTTCATTAGGAATATACTACTTTTTGTGAGAAACACAGTATTATCTATAAGGACTTTATGTTGTCCAATGGTGGCAC CACAGCAGAATTTCAACGACCTGCCATTTGAAGACCATTCATGACAGGTTTTGAATGGCAGACCATGGAAGCTGCTTTTG TGGAAATGCCAGAAGAATAAGCCAAAAAAATAAGAGATGGACAATATACACCCATGTCGTCTCAACATCCATGGAATGAG TTACACAAAAATCAAACACCTATTCCTCAGCCATCAAACCCTAAGTAGTCCATCATACTCACTTCTATTTTCAATAACCT CCCGCAGTCCCGCCTGACCTCTTCTATCTTCCCTTTCCAATGAACGGATTTTTTCTTACTCCTCTGTCTCTATTGTTCTA TGTAATTCTATTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTATCCCTTCACTCTACTTATTTCTTTCACT CTTATCCTCTTCTGTTTCTCATTTCTGTTATTTCTTTTCTGTGTCTGTTGTTATCTTTCTTGCTTGCTCCTTGTTACTCT ATTCTCCTCTTGATCCTTTTTAAGTTTTTTTCCCTCTGTTTTCTGCCCTCTTTTGCTCTTCATATTTTTTCCACTTTCCC ATTCTTGCCTATTCTTATTTCTTCTCTATTGCTTTGTGTTCTTGGTTCAAGAAGCGTATTTAGGCTTGATTGCACTTTTA GTCTCCTTAGTTTGGATTCTATTTGAGTTTTGTTCCCCTAGTTTCTTTTTTTAAGCTAATCAAGCCCATTTACTTTCAAA TTAAACAAATTTTGTCCTTATCTCAATCTTCATATATCCAAAATCCTAATTTTTTTGTTTCAAAAAATTCCTAAATCTTT TCTATTCAAATATTTTGGATTTTATGTTGGATTGGGGATTTAATTTTAGAAGATTTTGTAGGATGTGAGATTAAGATTTA AAGAAGTGGAAGTTTTTGGTGAAATTTAATATTTTGGTTGGTGAGTTTTGAGTGGAAGGTTTAAATGATTTAATCAGTTG AATTTGTGAAAATTATGCTTAGAAAATGAGAATTTGAAAGTAAAGTGGTCGAGGGATGTAAATGTAACAATTAAAAAAAA TTAAAGGGCTAAATTTGCTCAAAAAGTGATTTATATTAGATAAATGAAAAATGCAATTAAATTTTATAATGTTTAGTTTT AATGTTTTTTTCTACATTTTATAGTTGTTTGGTATACCTTCTGAACACATAATTTATTAGTTGTAACTTGTAATGCTTAA GCCATAGACTGCAACCCCATCTGCCATATTGGTATGGCTGATTTTTTTCTTTTGCCGCTTTGAACAGCTATCCCCCATTT ATAACATTCAAGGGACCAACTATTTCCAGTGCATATGCCATATGCTTTATTTGTCTCTCTCCTCTCTGAAAATGACACTG GCATGGTCCTAAGAAAAAGGAGAGGATCTAAATGTGCATGCTCTTTTTGTTAACTTTCTAATACTGTACTGTGCATCTTC ACTTAAAAAAACTGAGTACTGTGACAACTAGTGAACTGTTATTAAACTGAGCTACTCTTTCTGTCTGCAGTTGTTCATCA TTCTGTCCTGCACCATTGCAGTAGGGACAAACCTCAGCCAGTTCATCTGCATTGGTAGGTTTACAGCGGTAACATTCCAA GTCCTTGGCCACATGAAAACCATTCTGGTGCTGATCCTAGGGTTCATTTTCTTTGGAAAAGAGGGTCTCAATCTACAAGT TGTTATAGGCATGATGATTGCAATATTGGGAATGATTTGGTATGGTAATGCATCTTCAAAGCCAGGGGGAAAAGAGCGTC GTAGCTTTTCCATTCCTTCCTCCAAAACACAAGAATATGGTGCACTACCTGTGTCCTCTGAACCAGATGAGAAGGTATAG AAAATATAACTTCACTAGAAGAGTGGTGAAACTTTTGGTGAAGTCCATAGTAAAATCATGTGCCCTTTAGGCTAGCTGAC TTATTTTCTTTATACCTAGAGGGAATTCCCAGTTATTTATATAGATCATAGTCATATATATTTGCTTTTGTGTAATGAAT TATTTGGGAGAGAGTAGAGAGGACAAATCATTGTTAAAGAGGAAAGGGGTGAGATCTTCATTGTGTTCCAATTTTTTTAC AATAGAAAATGGTACTGTTACATTTATATTGAAGTTTCCATATTCGCCTTCATGGCTTGACAACTATGGTCCAATTGTTT CGAAGTTTGCTAAGTTTAGTGAACTTATTCATAGAATTGAGTTTGAGAAAATGATCTTATATTTGAAAATGATATTTTAA AAGTAAATTTATGACAATAGTTTAGTTTTCCAAACGGGCAATTTTCTTTCTAACCACGAGATGTGGCGTGGTGAATGGTG ATTGTTCATATCACTCTTTAATCCTAAGGTTTGAGGTTTGAACATTGCCTGTGGGGTCAATCACATTTTGGGGTCACCTG TGTTTACTGTTTCATATAATACCTACGGTGAAGGGATTAGTCATTGTTAGTGGAGGATACCTTGGGTTGCACCATCGTAA CATTTACAATTTTCCTTATTAAAATGAAGTGTAATGCCATCTTCTCAGACTTCAACAAAAGATTGTTGTGCTGAAACAAG CAACCTGTACAATCGGGCACCGCAAATAAGATAATGAATTTGGGCACGCATAATATGGACCGAGTTGCTCCTATGGATCA TTAGTGAATAGTGACACAAGTTATACTCG
CDS sequence (LotjaGi1g1v0313400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGTCAGCAAGCAAGGGTGATAGGAAGGCTACCCTTGATGCATCGTCATGGTTGTTCAACGTGGTCACGTCTGTGGG AATAATCCTTGTCAATAAAGCCCTGATGGCTAAATATGGTTTTAGTTTCGCTACAACTTTAACTGGTATGCATTTTGCCA CAACAACCTTGTTGACGCTGGTTCTTAAGTCACTGGGATATATCACGCCCTCTCATCTTCCAATATCTGATATCATCAAA TTTGTATTATTTGCCAATTTCTCCATTGTTGGAATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTTTATCAGATTGC TAAGCTTAGTATGATTCCAGTATCTTGTTTCCTGGAAGTTGTCTTGGACAATGTGCGATATTCAAGGGACACAAAGCTTA GTATTTTATTGGTTTTGCTTGGTGTTGCCATCTGTACAGTCACTGATGTCAGCGTCAATACAAAGGGTTTCGTAGCTGCT ATAATAGCAGTTTGGAGCACAGCACTGCAGCAATATTATGTGCATTTTCTTCAGAGGAAGTATTCTATCGGGTCATTTAA CTTGTTGGGCCACACTGCTCCAGCACAGGCAGCTAGTTTACTGCTAGTAGGCCCCTTTCTGGACTATTGGTTAACAAACA AACGAGTTGATGCCTATGGCTATGGTTTGACATCCACTTTGTTCATCATTCTGTCCTGCACCATTGCAGTAGGGACAAAC CTCAGCCAGTTCATCTGCATTGGTAGGTTTACAGCGGTAACATTCCAAGTCCTTGGCCACATGAAAACCATTCTGGTGCT GATCCTAGGGTTCATTTTCTTTGGAAAAGAGGGTCTCAATCTACAAGTTGTTATAGGCATGATGATTGCAATATTGGGAA TGATTTGGTATGGTAATGCATCTTCAAAGCCAGGGGGAAAAGAGCGTCGTAGCTTTTCCATTCCTTCCTCCAAAACACAA GAATATGGTGCACTACCTGTGTCCTCTGAACCAGATGAGAAGGTATAG
Protein sequence (LotjaGi1g1v0313400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSASKGDRKATLDASSWLFNVVTSVGIILVNKALMAKYGFSFATTLTGMHFATTTLLTLVLKSLGYITPSHLPISDIIK FVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDNVRYSRDTKLSILLVLLGVAICTVTDVSVNTKGFVAA IIAVWSTALQQYYVHFLQRKYSIGSFNLLGHTAPAQAASLLLVGPFLDYWLTNKRVDAYGYGLTSTLFIILSCTIAVGTN LSQFICIGRFTAVTFQVLGHMKTILVLILGFIFFGKEGLNLQVVIGMMIAILGMIWYGNASSKPGGKERRSFSIPSSKTQ EYGALPVSSEPDEKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 6 | 327 | 322 | 5.7E-206 | – | |
| PANTHER | 6 | 327 | 322 | 5.7E-206 | – | |
| Phobius | 12 | 31 | 20 | - | – | |
| TMHMM | 15 | 32 | 18 | - | – | |
| Pfam | 24 | 297 | 274 | 1.3E-16 | ||
| Phobius | 32 | 42 | 11 | - | – | |
| TMHMM | 39 | 61 | 23 | - | – | |
| Phobius | 43 | 66 | 24 | - | – | |
| Phobius | 67 | 77 | 11 | - | – | |
| Phobius | 78 | 96 | 19 | - | – | |
| TMHMM | 81 | 103 | 23 | - | – | |
| Phobius | 97 | 101 | 5 | - | – | |
| Phobius | 102 | 121 | 20 | - | – | |
| Phobius | 122 | 132 | 11 | - | – | |
| TMHMM | 133 | 152 | 20 | - | – | |
| Phobius | 133 | 150 | 18 | - | – | |
| Phobius | 151 | 155 | 5 | - | – | |
| Phobius | 156 | 174 | 19 | - | – | |
| TMHMM | 157 | 174 | 18 | - | – | |
| Phobius | 175 | 185 | 11 | - | – | |
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 186 | 207 | 22 | - | – | |
| Phobius | 208 | 218 | 11 | - | – | |
| TMHMM | 218 | 240 | 23 | - | – | |
| Phobius | 219 | 238 | 20 | - | – | |
| Phobius | 239 | 249 | 11 | - | – | |
| Phobius | 250 | 273 | 24 | - | – | |
| TMHMM | 252 | 274 | 23 | - | – | |
| Phobius | 274 | 278 | 5 | - | – | |
| TMHMM | 278 | 300 | 23 | - | – | |
| Phobius | 279 | 300 | 22 | - | – | |
| Phobius | 301 | 335 | 35 | - | – | |
| MobiDBLite | 302 | 335 | 34 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0313400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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