Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0313400 |
Transcript ID | LotjaGi1g1v0313400.2 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Transporter-related family protein; TAIR: AT4G09810.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2; TrEMBL-Plants: tr|G7JAC6|G7JAC6_MEDTR Nucleotide/sugar transporter family protein; Found in the gene: LotjaGi1g1v0313400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:75785050..75790479) extracted from Lotus japonicus Gifu genome v1.2.
CTAGTTCAATATGTCGTCAGCAAGCAAGGGTGATAGGAAGGCTACCCTTGATGCATCGTCATGGTTGTTCAACGTGGTCA CGTCTGTGGGAATAATCCTTGTCAATAAAGCCCTGATGGCTAAATATGGTTTTAGTTTCGGTATGACTTCTTCATGACTT TTCCCTTTTTCTTTCCCTCCATTAAATGTTTGTTTGGTCATACCTCTAATTTAAAAGATATCATGCTTCTCATCTATGTG TTGTTTGGATAAACTACCAATTTGGTGCATTCCTTTTTGGCTAGTAAGAAACATGTATCATGTATGTATGTTTTTTGTGT TAATGGTGGAGAAAGATTTTTGCTTTAATAGACTTGATATATTCTGTGTATTTTTCACTTTGATATTACCAACTAGCATC CTTTTGGCTTTTATTGATGGTCTGCAGCATAAACTTTTCCTTGGATTTAAAAATGCATGCATTATATCTTGGTAGTAGTT GAATAGCTGACAAGTTGGCATTGGTGATGCTGGTGTGAATACTATGTAAAATGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGTAAATCTGAGAAGTTATGCTTTCATATCATATGCTGATGTTTCTCAGCCCGCACAAA CTTTTTGTATTTGTGAAGTGAAATCCAATGTAAAAATGTGAGCAAAATCCTCAATTTTTTCAATCCAAAAAACTGTTGTG ATGTTACAGATGGACATTCGAAGTTTTCTCTAGGAAAGCCTTTTGAAACAACTCTTTCATTTGCCTGATTTTTAGTTTTG ATATTGATTACAGAACTACTGTTCTTAATATATCCCAAAGCTAATCTTCCGATGTGTCAAAAAAAGATATATATCCCAAA GCTACAACAGCTTTAAAGCACTGAGAATAGCATTGGATGATCAATTAAAATCTATTAAATAACTAGTCAACCAAAGAATA ATGTAGTTTATGGTTTCTTCTGATGTTACTTGTAAGGCTACAGATTGCTTCTAAACTTCTGCAATAGTCTTGAATCCTGA CATTCTATATCATATCATGCTATTATGCAGCTACAACTTTAACTGGTATGCATTTTGCCACAACAACCTTGTTGACGCTG GTTCTTAAGTCACTGGGATATATCACGCCCTCTCATCTTCCAATATCTGATATCATCAAATTTGTATTATTTGCCAATTT CTCCATTGTTGGAATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTTTATCAGGTAACTTATGGGCTTTTTGTTATGA ACTTTTTAACTCTCCTTTGACATAGATTAGTATTTATAATAATTTCTTCCTCTCATTATTATCAGATTGCTAAGCTTAGT ATGATTCCAGTATCTTGTTTCCTGGAAGTTGTCTTGGACAATGTGCGATATTCAAGGGACACAAAGCTTAGTATTTTATT GGTTTTGCTTGGTGTTGCCATCTGTACAGTCACTGATGTCAGCGTCAATACAAAGGGTTTCGTAGCTGCTATAATAGCAG TTTGGAGCACAGCACTGCAGCAATATGTAAGTAGCACTACATTAAATATTGAACCTTGGTTGGGAGATACAAACTGATCA ATTTGAATTCCTTGCCATCAAGTAGTTCTAGATTGTTAAACATTCACTTTCAGGTTCATGATGCTCGTTGGTAACTTTCA TGTTTGTAAGAATTAATCTTTTTATGTATCTATAAATGACAAATTGGAAGCCTGCAAAAAAATTTCTTTGTTTTTTTGCA TTTTTATAATGAGCAGTATTCTCAGATGTATCATCTGGAGCAGAGTACAATAAGTTGTTTAATATTTCTAGCTCTACCTG TTTTATTTGGGTTTGACAATCTAGGTTTTGTTTGTGCAGTATGTGCATTTTCTTCAGAGGAAGTATTCTATCGGGTCATT TAACTTGTTGGGCCACACTGCTCCAGCACAGGCAGCTAGTTTACTGCTAGTAGGCCCCTTTCTGGACTATTGGTTAACAA ACAAACGAGTTGATGCCTATGGCTATGGTTTGACATCCACTGTAAGTTCTCTTTCTCTTTCTAGTTTTCTTTTCTAATAA ATGTTGAGTTATGAGAAGGGGGTAAGCAGAAACTTTTGAAATTTATTTAGTTCAGGTTTAGGCTGCTTTTTTCTTTTAGC TGTTAAGTTAATATTGAAATATTCGACCAAAAACAAAGTTAATATTGAAATAAGTTGTAAGACTAGGGACTAATCCTGCA TCAGAGAATTGTGTGTGCCACTTGCATGGTGAATTTCATATTCATTATAAAAGATCGCATTCTTTGTATTGCTTATTATT GAACTTGGTGCTAAGTTATACTGCCTAACTTCAGTCTCAGGTTCCTGAATGATATTAAGAAAATAACTTCTTGGCTTACT ATGTCTAAGTCTAAGTTTTAACTTCGGTCACATTGCTTCACAACATACAAACTTTTCAATTTATAAGTCCTGTAAGCATT GCATGAAGCCAGAAGTTCTGGAAGCTTCCTTCCGTTAAGAACATTTCAAACCGTTGACTAAAAAGGACCAGTAAATAGCA TTTGAAGTTCAAGGTGTTATATCCAATTCCAAACATGTTCATTCTTTTTATTAGGGTGAAATCACCTTTTCTTAACTAAT GTATTCTTCTTTACCCTTCCCTTTTTTTAACTCGCTGTTGCATCTTACTAGTTAACTTTAGTTTTCCTGTTATACCATCT GTATGTAAAAAAATCATGCAGATTTGTGATTCTGAAAAGTGGCACATAATTATTTCAAATCCACATAGATGCTGAATGTC AAGTTCTTTGTATTCTTAATATGACCAATCTAGTCTTAAAAAAATTACATTTTATGAGCAATTTTTCTATTAAGATCTCT CAGATCATAACCCACAATCTGTAGGGGCAATTATCTTTGTGAATCATTACTTTCTTTTAAAATTTCTTGTATATTGAAGA TTTTAATTAGATTGTATTATCTTGTTTTTATCTTGTGATCTCACTTATGAGTTCCTGGAGATTCTTATTTTATCTACCTT GTATTATGCTTCTATAATGATTTTAGCTTAGGAAGTTCTTTAGCAGTCCTATCCCTAGTGTACATGTAGAAAACAAGAAA GAGTCACTGTTGTTAAATTTGCTTACCTTTATACTGGCAGCATGCCAATAGCTCTTCTTTTTATTCATAAAAAACGATGT ATGCTTGACAATTTGTACTTAAGTAGTTGCTCACAATTCACACTGTATTTGTGAGGATGCCTAGCCTTGGTCTACTTAGA ACCAAATATTTTCTGGTTGTCAATTTGTTTTCTGGAAGATTTGGATTATGACCCATTTTCATTAGGAATATACTACTTTT TGTGAGAAACACAGTATTATCTATAAGGACTTTATGTTGTCCAATGGTGGCACCACAGCAGAATTTCAACGACCTGCCAT TTGAAGACCATTCATGACAGGTTTTGAATGGCAGACCATGGAAGCTGCTTTTGTGGAAATGCCAGAAGAATAAGCCAAAA AAATAAGAGATGGACAATATACACCCATGTCGTCTCAACATCCATGGAATGAGTTACACAAAAATCAAACACCTATTCCT CAGCCATCAAACCCTAAGTAGTCCATCATACTCACTTCTATTTTCAATAACCTCCCGCAGTCCCGCCTGACCTCTTCTAT CTTCCCTTTCCAATGAACGGATTTTTTCTTACTCCTCTGTCTCTATTGTTCTATGTAATTCTATTTCATTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTATGTATCCCTTCACTCTACTTATTTCTTTCACTCTTATCCTCTTCTGTTTCTCATTTCTG TTATTTCTTTTCTGTGTCTGTTGTTATCTTTCTTGCTTGCTCCTTGTTACTCTATTCTCCTCTTGATCCTTTTTAAGTTT TTTTCCCTCTGTTTTCTGCCCTCTTTTGCTCTTCATATTTTTTCCACTTTCCCATTCTTGCCTATTCTTATTTCTTCTCT ATTGCTTTGTGTTCTTGGTTCAAGAAGCGTATTTAGGCTTGATTGCACTTTTAGTCTCCTTAGTTTGGATTCTATTTGAG TTTTGTTCCCCTAGTTTCTTTTTTTAAGCTAATCAAGCCCATTTACTTTCAAATTAAACAAATTTTGTCCTTATCTCAAT CTTCATATATCCAAAATCCTAATTTTTTTGTTTCAAAAAATTCCTAAATCTTTTCTATTCAAATATTTTGGATTTTATGT TGGATTGGGGATTTAATTTTAGAAGATTTTGTAGGATGTGAGATTAAGATTTAAAGAAGTGGAAGTTTTTGGTGAAATTT AATATTTTGGTTGGTGAGTTTTGAGTGGAAGGTTTAAATGATTTAATCAGTTGAATTTGTGAAAATTATGCTTAGAAAAT GAGAATTTGAAAGTAAAGTGGTCGAGGGATGTAAATGTAACAATTAAAAAAAATTAAAGGGCTAAATTTGCTCAAAAAGT GATTTATATTAGATAAATGAAAAATGCAATTAAATTTTATAATGTTTAGTTTTAATGTTTTTTTCTACATTTTATAGTTG TTTGGTATACCTTCTGAACACATAATTTATTAGTTGTAACTTGTAATGCTTAAGCCATAGACTGCAACCCCATCTGCCAT ATTGGTATGGCTGATTTTTTTCTTTTGCCGCTTTGAACAGCTATCCCCCATTTATAACATTCAAGGGACCAACTATTTCC AGTGCATATGCCATATGCTTTATTTGTCTCTCTCCTCTCTGAAAATGACACTGGCATGGTCCTAAGAAAAAGGAGAGGAT CTAAATGTGCATGCTCTTTTTGTTAACTTTCTAATACTGTACTGTGCATCTTCACTTAAAAAAACTGAGTACTGTGACAA CTAGTGAACTGTTATTAAACTGAGCTACTCTTTCTGTCTGCAGTTGTTCATCATTCTGTCCTGCACCATTGCAGTAGGGA CAAACCTCAGCCAGTTCATCTGCATTGGTAGGTTTACAGCGGTAACATTCCAAGTCCTTGGCCACATGAAAACCATTCTG GTGCTGATCCTAGGGTTCATTTTCTTTGGAAAAGAGGGTCTCAATCTACAAGTTGTTATAGGCATGATGATTGCAATATT GGGAATGATTTGGTATGGTAATGCATCTTCAAAGCCAGGGGGAAAAGAGCGTCGTAGCTTTTCCATTCCTTCCTCCAAAA CACAAGAATATGGTGCACTACCTGTGTCCTCTGAACCAGATGAGAAGGTATAGAAAATATAACTTCACTAGAAGAGTGGT GAAACTTTTGGTGAAGTCCATAGTAAAATCATGTGCCCTTTAGGCTAGCTGACTTATTTTCTTTATACCTAGAGGGAATT CCCAGTTATTTATATAGATCATAGTCATATATATTTGCTTTTGTGTAATGAATTATTTGGGAGAGAGTAG
CDS sequence (LotjaGi1g1v0313400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGTCAGCAAGCAAGGGTGATAGGAAGGCTACCCTTGATGCATCGTCATGGTTGTTCAACGTGGTCACGTCTGTGGG AATAATCCTTGTCAATAAAGCCCTGATGGCTAAATATGGTTTTAGTTTCGCTACAACTTTAACTGGTATGCATTTTGCCA CAACAACCTTGTTGACGCTGGTTCTTAAGTCACTGGGATATATCACGCCCTCTCATCTTCCAATATCTGATATCATCAAA TTTGTATTATTTGCCAATTTCTCCATTGTTGGAATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTTTATCAGATTGC TAAGCTTAGTATGATTCCAGTATCTTGTTTCCTGGAAGTTGTCTTGGACAATGTGCGATATTCAAGGGACACAAAGCTTA GTATTTTATTGGTTTTGCTTGGTGTTGCCATCTGTACAGTCACTGATGTCAGCGTCAATACAAAGGGTTTCGTAGCTGCT ATAATAGCAGTTTGGAGCACAGTTTTGTTTGTGCAGTATGTGCATTTTCTTCAGAGGAAGTATTCTATCGGGTCATTTAA CTTGTTGGGCCACACTGCTCCAGCACAGGCAGCTAGTTTACTGCTAGTAGGCCCCTTTCTGGACTATTGGTTAACAAACA AACGAGTTGATGCCTATGGCTATGGTTTGACATCCACTTTGTTCATCATTCTGTCCTGCACCATTGCAGTAGGGACAAAC CTCAGCCAGTTCATCTGCATTGGTAGGTTTACAGCGGTAACATTCCAAGTCCTTGGCCACATGAAAACCATTCTGGTGCT GATCCTAGGGTTCATTTTCTTTGGAAAAGAGGGTCTCAATCTACAAGTTGTTATAGGCATGATGATTGCAATATTGGGAA TGATTTGGTATGGTAATGCATCTTCAAAGCCAGGGGGAAAAGAGCGTCGTAGCTTTTCCATTCCTTCCTCCAAAACACAA GAAGAGTAG
Protein sequence (LotjaGi1g1v0313400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSASKGDRKATLDASSWLFNVVTSVGIILVNKALMAKYGFSFATTLTGMHFATTTLLTLVLKSLGYITPSHLPISDIIK FVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDNVRYSRDTKLSILLVLLGVAICTVTDVSVNTKGFVAA IIAVWSTVLFVQYVHFLQRKYSIGSFNLLGHTAPAQAASLLLVGPFLDYWLTNKRVDAYGYGLTSTLFIILSCTIAVGTN LSQFICIGRFTAVTFQVLGHMKTILVLILGFIFFGKEGLNLQVVIGMMIAILGMIWYGNASSKPGGKERRSFSIPSSKTQ EE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 11 | 11 | - | – | |
PANTHER | 6 | 321 | 316 | 7.3E-200 | – | |
PANTHER | 6 | 321 | 316 | 7.3E-200 | – | |
Phobius | 12 | 31 | 20 | - | – | |
TMHMM | 15 | 32 | 18 | - | – | |
Pfam | 24 | 297 | 274 | 8.8E-15 | ||
Phobius | 32 | 42 | 11 | - | – | |
TMHMM | 39 | 61 | 23 | - | – | |
Phobius | 43 | 66 | 24 | - | – | |
Phobius | 67 | 77 | 11 | - | – | |
Phobius | 78 | 96 | 19 | - | – | |
TMHMM | 81 | 103 | 23 | - | – | |
Phobius | 97 | 101 | 5 | - | – | |
Phobius | 102 | 121 | 20 | - | – | |
Phobius | 122 | 132 | 11 | - | – | |
Phobius | 133 | 151 | 19 | - | – | |
TMHMM | 133 | 152 | 20 | - | – | |
Phobius | 152 | 156 | 5 | - | – | |
TMHMM | 157 | 174 | 18 | - | – | |
Phobius | 157 | 176 | 20 | - | – | |
Phobius | 177 | 187 | 11 | - | – | |
TMHMM | 181 | 203 | 23 | - | – | |
Phobius | 188 | 207 | 20 | - | – | |
Phobius | 208 | 218 | 11 | - | – | |
TMHMM | 218 | 240 | 23 | - | – | |
Phobius | 219 | 238 | 20 | - | – | |
Phobius | 239 | 249 | 11 | - | – | |
Phobius | 250 | 273 | 24 | - | – | |
TMHMM | 252 | 274 | 23 | - | – | |
Phobius | 274 | 278 | 5 | - | – | |
TMHMM | 278 | 300 | 23 | - | – | |
Phobius | 279 | 300 | 22 | - | – | |
Phobius | 301 | 322 | 22 | - | – | |
MobiDBLite | 302 | 322 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0313400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…