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LotjaGi1g1v0314300.1

Overview

Field Value
Gene ID LotjaGi1g1v0314300
Transcript ID LotjaGi1g1v0314300.1
Lotus japonicus genome version Gifu v1.2
Description Major allergen Bet v 1; TAIR: AT2G26040.1 PYR1-like 2; Swiss-Prot: sp|Q4QTJ1|NCS2_PAPSO S-norcoclaurine synthase 2; TrEMBL-Plants: tr|I3SPM5|I3SPM5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0314300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:75917743..75923653) extracted from Lotus japonicus Gifu genome v1.2.

TTTTTCTTTAATAACAACTTAATCATTTTTTAATTTTAAATTTATTTTGAAGACCCTCTCCCTCACACAGCGTACTCACT ACTCAGAGTCTCAGACCCACCCTCTTTCTCTCGCTAGTCGCTACCCAGGTCCACCGGCCACCACCACGCCCACGCCACAC CACCGCGCCAGTCACCACCCAGCCGCGCCTCTTCCGGCCTCTCTATCTGACTATCTCAGCTTCTCCTTTCTCTTTCAGTC AGTGGGTTACTGGGTAACATGGTAAGGTTGCTACTTGCTAAATTGATTTTTGTGTGCAGCTAATTGATTGCTAAATTGAT TTTTGGTGAAAATTGAAAATCCATGTCGTTGTTGTTGAGATCTGACGGAAGAAAAGGAAACATGATTTGGTATTATATGT GCACACATCCTCCCTGCTGAAAGCTTTGAAACAATGAAGGAGCAAGGGAATAAATTCCTTAGCATAATTAGTAGTTTCTT ACCTTCTAAGTTCTAATTTTTAGGTCCATTGGGTTTAGGAAAGAAATTCTACCCTGATTTAACCTCTTATGATGTGGTAA TATAACCTTTTTTTATTTCAAAAAAATATAACCTTGTAAATGGTGATTGATATGTTTTGAATTATGTTAAGATCATAAGA TGTGTTGAAAACATTGATTTTAGTTTGGATTAGAGAGTTAGTCTTGAAGTGTTTTCTGCATTATGGAGTTTTAATTGCTT TGAGTTTTGCATTATGGAGTTCAAGGAGTCCTATGAAGTGTTTTATGAAGTGTTTTCTGATCTTGCTTTCTATGTGCTGC TGCTTTGAAATTTCAATTTTTCATGGATTTATAGCCTTTTAAATGGAATTTTGAAAGTTGGAAGATAGATGGTTTGAAAT CACAATCGAGCAACCAAAGCTTCATGCTTGATATCTGAGACTGAAATGCTGCATAACAGCAACCAAAGCCTTTTCCCTCT GGGTGTAGTCAACTAGATAGATCAATTAATTCCATAATATAACCTGAGGCACTCTATATAGTTGGACCTTTTGGAGTCAT GGGATTTTCTTATCAATTCATAAGGGCATCAACCAGAAGATGCAAAATGATTGCAGTGTGATAATGTTTCATGTTTCACA CTGGCTGAAATAAGTGATTGTGGAGAACCTATGCTAATGAATACCCTTTCTCAATTATAATGCTTCTAGGAATGACAAAT GTCAGAAGAATTAAGCAGTATAGTTGTACAATAATGACCGGATACTACTTTTAACCTTTCATTTATCCTTTAATTTTTTG ACCATTTTTCTTCTTGTTTCTTTTAACACAAACAAACATCAGAAATCTTCAATCAAAGTGTGATGAGTCATCGGTTTGGA CACTTTGTTCAATTCTTCTTCTGCTGCAGCAATTATAGAGTGCATGACATTAGTTTTTTTTTTGAAAAATAAAGGATTGT ATTATTATCCACAAAAAAAAAAAAAGACCTTGAGGACAGAACCCCCCAAAGCCGGAAAATGAGGCAGACAAGGCACGCAC GGACCGCTCGAAAGAAAAACCCAAAAAAGAATAACCATCCCCCACAGGGAACCCAAAAAACAACCCCACGGGCTATCAGC AGAGCTATATAAGCAATAACCAAGGCCAAAAAAACGTGAAACACCAAATGAGGCACAAAACCAGCCTGAGATTCAAGGCA CGAAATGTTCCTCAAAAACCTTTTCGAGACCCTGTATAGCCTCGATGTCGCTCCCTTCAAACACCATACCCACAACCTTG CCGAGAAGCCACGCCTTCTTTGCTCGCGTGAAGAAACGCCCCCTGCTAACAGTTCCCAAATCCGGCACTGACGAAGAAGC CAATGGATTGACCAAAGCAGAGCCCTCAGCCAATAACAAAGAATCATCCAACTCACAAGTTCCTGGAATAAGTGACGAAG ATCCCCCATCCTCCAAAACTGAGTCTCTAGCTTTAATTTTCCTAGGCCTCCCTCGAGAACGAGATGCAGAACCATTAAGG CCGCAACCCCTGGCCTTCTTAGGACGACCCCGACGCTTAGGAACACAAGAGCCCCCAACCACAACAGCATCAGGATCCAC ATCTGGAAAATCAACCCCAGAATGGCATCCACCAGCATCAAGGGGGGTGACCAAGCAAACCTCATTCAACCCCTCCGACG TACAAATAACACCACCATCCAATACAGAACCAGTAAGCACCTGGAAAAGATCTTCCAGAGCAAAAGCCTCCAACATCCAA GCACTTAAAGTGAAAGTTTAATGTATTCTCTTTTGTGGTCTCCCCAATTTATTGATTTGGAACCCCCTGACCCCCGGGTC CTGGATCCGCCACTGTCTTCAGTGCAAATTAATTTTTTCAGGGGTTAAAAAAAAATCTATACAAGGGGTAAGTGGAAAAT TTAACCTTTTAAATTGAATCAAAATCCAGCGGAAGCAATGCATCTGAGTATAAATTTCCTACAAAGATGTGTAGACATGT TCCCCAAAAATGCAACAGATATGGTGGGGTGGTGACAGATAAACAAATCATAAGACATAGATTACCAAAAACACTTCATG AGGATGTAGTGTATACCTTTATGACCTGCTAAGGTTAATATGTGAAAATCAGTGCCCAGGGACATCTTATATTGTTGATA ATCGATTTGATACTATTCAATAGTTGGTCATTTGAACTACTATTATCTATCCATTGGGTTGGGCATAAAGATAAGGTTTT ACGAATGACTTTAGGAAATAAAGTTGAGAATTTAATAGTGTGTAGGTTATCTATCCATTAGGTTTTCCATTTCCCTTAGT AGTTAGGATTCTTGATTTTCTGCAAAACAAAAGCAAATGCAAAAAAACCTGTCAAAAAAATAACCAAATATAAAAAACTG AACCTAAAAATCTTGAAATTGATACTTCCCAGCTGGAAATCTACAACTAAACTACATCAAAATCTAGTTTAAGGAATGGA TTTAGGAAAATTGCAATGGTTAATTATCACACATCGAGTTATGTGTGATAATTAAGCTATTTTTGTTCTGCAGCCTCAAA AGCCAAAAAGAAAAAAAAAAACTGATTTGATAACACTAACGTGAAGATAAAAATCCTAGGATTGAAAATCATTCATACCT CAACTTTCTTCATACATGAATTTGCTTTCTGAGCGAACTGAGGCAGGGAGAAATTCCAAAATTTATTGATATTTGAACAA CAATTGAAATCTCCAATACAACTATAAGAACAAATTGAAAATCATGTGAAGAACAACTAGAGAGATTCGAGCTTACCACA ATAGCAGATGAACGACCTGATTTTGATGCAGGTACAAGGTATAACACAAGTTTCTCAAGAAACCCTCGATAGACATTCGT CGTCGTTTATCGCCCGATTTGGCTCGCCTTCATGATTGGCCTTGGCCTCCACTGGTCGCGGTGGACATCGCTCGCTTCCT CTGGACGGCACTGTCGGGGTTCGTTGCCCACCGCCACTGGTTCGTTCGTATTCATCGTTCTCTTCTCTTGCGGCAAGAGA AACGAAAAGAATATGCTGGTATGGTGCCTCTGCCTATTAAAGGGAAAAAAAGGGAATGAAGGAAGGGGTAAATGCATGCG AAGTACTACTCTTTTAGTGGGAAATTATCACTGTATAATCAAATTAATACCAACCAATCTTTAGTTATCACGGATTTTAA AAATTCTCAAATAAATCACTGACAATATGCTTATTGGCTACAAATTTGTCGGTAAAGGCCACTTTTCTTGTAGAGTCTTG TCTCTCGACGAGTGACACTGAAGCAAAAGTAGGTTTAATCTATTTATTTATTTATCTCTGATTTTTTTGTTGTTATTGCC ATTGGATTAGGCATCTTACGGAGTCTGTAACAAAAAAAAAGGCATCTTACGGAGTCAACAACGTACAGATTCTAAGCCAG GAGAACTTGTCTTCACATGCAGTTATCCTTTATCTCTGTGTGTTGTTTCATACTTCAGATATACACTATACACACCAGAA ACACAGTCCATTGTCAAGAGCAACGTTTCTGTAAGAGATCATGTTTGGCAAACTGGAGCATGAGCTGGAGATGCATGTGC CTGCCTGCAAGAGAGGTATGGGATCTGTTTGGCACCCTTCGTATAGGCCAATTTGTTGAGCAAGAGATGACTGAGTTGTT CCAAAAGGTGGAGCTAATTGAAGGAGATGGAGGGGTTGGAACTGTCCTCAAACTAACCTTTGCTCCAGGTCATTTATTTA TCTTAATTATATATTAATTCATATATTGTATGATATTAGTGCATGTTTTGAAAGTCTTTCTATAAATGATTATGAAACCA AAATCAATTCAGGGGCGGGGAAACACTTCTCTGACTAATTTCTAGGTGCTAGAATTAACTATTATAAGGAAGAATAAGCT AATTCAAACATGCTATTAGCTTAGCGTCACAACTATGCAAAAGAACTAATTTTCCGATGATACCCTCTAGAAAAACAAAC AAGACTCACTAATCTCAAAGTATAAACATTGTTTAAAAAAAAGGTATAAACATGAATGCATAGTACTCACACTGATAGTG TCTTTTATATAATCTTGATGATCTCCAATGAAAAGAAAACTATTAGTTGAGATATGCTGTTGTTATATTTGATTACTAGT TGCAATTGTAAATTTACTAATTAATCAACATGTCTTTGTTACAAGTGGAAGGAGCTCAAATTTCTGAAGGATATGATATT GATTCAATCTTCAGATTCATGCACAGTGTATAAATAATACTATCGATTTCAATTCCCCCCAAAATTAAATTAAAAACTCA CTTAGAGTAAATCTCAGGATGGTGATGATTATTTTATTTTTTTGGATACAAGGAAGGGCCAAGCCCTATTTTTAAATATT CATGTATGATGTATAATTAGGGGCCTTGCCCATAGTTAAATTATATTGATTGTTGAAGTTTTGGGGGTTAATTTGACTAG GTATACCGCTAACAAGTTACAAAGAGAAGTTCACCAAGATTGATAATGAGAAGAGGATCAAAGAAGTAGAGGTAGTTGAA GGAGGGTACTTGGAGCATGGATTCACTTTATACAAAGTTACCTTACATGTCATAGAGAAAGGTGAAGATTCAAGCGCGCT CAAGTCCACAATCGAGTATGAAGTCAAGGAAGAGGATGCAGCTAATGCCTCACTTGTTTCCATCCAGCCAATTGCAAACA TTGCACAACTTGCCAAGAATTACTTCAGCAGAAACAAGGCTGCAAATTAAAAGAAGCAAAACAGTAATCATGTTTGTATC AACTTAACTTTTTTCTCAGAATCCATTATGGGAACCAAAAGCTACTCAAAAAAGCTTCTCTCCATAATTAATTTTGACTT TAAAATCAATTGTCGAAGGATTTTCAAACATTCACTAAATAATACTCGAGAATGGCAAACTCACTCCCTTGATTTGCCTA AGTTCATGAATAAATGATAAAGTTGTCTCATATGCCCAATCATCTACCATGTTTATTTGTTGAGCATAATTTATCAAATT TTGTTTCCAGTGTCCAAAAGCTATAGTCTTCATTAATAAATCACCAGGGGCGGATCCACATTACACTCAGGGGTTCAGAT GAACCCCCTAAAAAAAAAATTTCTACATACCCACTTGTATAAATTCTTTTTGGAACCCCCTGAAAATTTTGATTTGCACC CAAGACCCACTCCTCTTTACCTCACACACACAGTCACACACACTCACTACTCAGAGTACCGGTAAGTGAGATAAAACACA AAAAGAATGGAGAAGAATCAATAACAGAAGCTTCCTGGCTGTGTTGAGCGTGAGTGCGGCGCACAGAGGAGATTGGAAAG GATATTCACGTACTAGGGTTTCTAAATAAGTATGAGTCTTTGGGCCTTTATGCTAATTGTCTGGATGCAAG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0314300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCAGTTATCCTTTATCTCTGTGTGTTGTTTCATACTTCAGATATACACTATACACACCAGAAACACAGTCCATTGTCA AGAGCAACGTTTCTGTAAGAGATCATGTTTGGCAAACTGGAGCATGAGCTGGAGATGCATGTGCCTGCCTGCAAGAGAGG TATGGGATCTGTTTGGCACCCTTCGTATAGGCCAATTTGTTGAGCAAGAGATGACTGAGTTGTTCCAAAAGGTGGAGCTA ATTGAAGGAGATGGAGGGGTTGGAACTGTCCTCAAACTAACCTTTGCTCCAGGTATACCGCTAACAAGTTACAAAGAGAA GTTCACCAAGATTGATAATGAGAAGAGGATCAAAGAAGTAGAGGTAGTTGAAGGAGGGTACTTGGAGCATGGATTCACTT TATACAAAGTTACCTTACATGTCATAGAGAAAGGTGAAGATTCAAGCGCGCTCAAGTCCACAATCGAGTATGAAGTCAAG GAAGAGGATGCAGCTAATGCCTCACTTGTTTCCATCCAGCCAATTGCAAACATTGCACAACTTGCCAAGAATTACTTCAG CAGAAACAAGGCTGCAAATTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0314300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MQLSFISVCCFILQIYTIHTRNTVHCQEQRFCKRSCLANWSMSWRCMCLPAREVWDLFGTLRIGQFVEQEMTELFQKVEL IEGDGGVGTVLKLTFAPGIPLTSYKEKFTKIDNEKRIKEVEVVEGGYLEHGFTLYKVTLHVIEKGEDSSALKSTIEYEVK EEDAANASLVSIQPIANIAQLAKNYFSRNKAAN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_EUK
SignalP-noTM
1 20 20 - –
Phobius
SIGNAL_PEPTIDE
1 20 20 - –
Phobius
SIGNAL_PEPTIDE_N_REGION
1 2 2 - –
Phobius
SIGNAL_PEPTIDE_H_REGION
3 13 11 - –
Phobius
SIGNAL_PEPTIDE_C_REGION
14 20 7 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
21 193 173 - –
Gene3D
G3DSA:3.30.530.20
45 192 148 5.8E-39
IPR023393
PANTHER
PTHR31213
49 191 143 6.8E-58 –
CDD
cd07816
49 163 115 9.64269E-37 –
PANTHER
PTHR31213:SF19
49 191 143 6.8E-58 –
SUPERFAMILY
SSF55961
50 189 140 1.75E-24 –
Pfam
PF00407
67 166 100 2.8E-16
IPR000916

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006952
Biological process Defense response Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0314300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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