Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0314900 |
| Transcript ID | LotjaGi1g1v0314900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Citrate-binding protein; TAIR: AT5G06620.1 SET domain protein 38; Swiss-Prot: sp|Q39962|CBPR_HEVBR Citrate-binding protein; TrEMBL-Plants: tr|K7KV50|K7KV50_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0314900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:76090553..76092404) extracted from Lotus japonicus Gifu genome v1.2.
TCTGAACTAATCAGTAACTAACATGCCAGCTCATGCCAGCTTACAATAAACTTCTATAGTATTACAATATAGTCCTTGTA CTACTACTTATTACTAATAGTGATCCAATGAACTTTTACAAATACACATATATTGATTCGACCCCACACATCACATGCAA ACTAAACTCAGTAAATTATCATAGTCTTCCTATTGCAGCTCAATAATCACTATTAAGTGCCCGGATGCGGACGGCATCAA TAGCAGGTTGCATACCCTCTTGTTTTTTCTTTTGGGGTTCAACCTTTTGATAAAAACTCTCTTGCAGGCACAAACCAATT GAACCAATGAAAACTCTCTTGCAGGCACAAACCAATGTAATATTGGGGCAGATTATAAATATGCCGCTCAGACTAGCTAA TTTTGCAAACCATCCGCTCAAGGCTTCCCTCCATCTCCTCACATTTCCTCATCATTTCAACTGCTTCAACTTATATTACT AAGGCTTTCTCTGTTCCACATCTTTCAACTGAAGGATATGGGTACTCTGCATCAGATTACTCTGCCTCTTCTGAACATGC TTCTTTATATTACATTAATCATGCACAGCACAATAAGCACCTCACGGGTGGACCTCACACTTGGTTTCATTCATCTCCCA CTAAACTCCTCCAATTTGCGCCATCACAAGCCATACAATTTACCCCTACACAAACGCTACAGCTTTAGACACGGAGTACA CAAGCTTTGGGTACACTCCACAGACAAACCTTTGTACCGAAATAGCCCAACCAAGCCTAGATCAGAAATCCGCATTGCTG TATATAATCCAAGCAACCTCCTTAATTTTCGAGTGAGTGCTCAATTTCTCTCTCAAAGTGTAAGTGTCGGGAAAGTTAGT CAATAAAAGAAGGAAATATCTCATGACGCAGTTCCTTCTTGATTGTGTTGAATGTGGGTCAAGTTAATCCCTATGGCAGA TATAGGAACCAACTTCACCAACATTTGAACAATAAGGACCGCGTGGATATTTCTTTTTTTTTTTACAGACTAACCTATTT GACACTTACATTTTCTGTGAGGAAATTGAACATTCAATCTTAATTTTCTCAAGTACACTTTTCTGATTCTTCTTTAGGCT CATACCATATGTCCATATATATGAATTAATGTATTATGTTGCTTTCAGGGCCACGATTACTCTTCTGGGGTATGGCAATT TGAAGGGCAGGGGTATGTGCCATGTGGTACTTCTGGCGTTTCCATCATGCAAGTGTTTGGGTCAGATCCTCCACATGCGA CCACCTTAATGGTTAGAACCTATAACGGGTCTCTTTCATATTATAGGGGTCCTGTTCTGGTTCAAAACATCTGGGATAGA TGGTTTTATTTGAATGTGATCCATGATGTGGAGGCTTGTAATGTGAAGGTTTATGTTGATGGGGTTCTGGTTTTAGAAGC ACCGGGTCGTGGAGGGAGCTCCCATTACTTCAAATTTGGAGTTTATGCACAGAATGATCCTTCCTACTACATGGAGTCCC GGTGGAAGGGAATCAGAGTTCTCAAAAAATGTTCATGATTGAAATGAAATAGAGTTGTTGAGTCATGAAAATTAGTTTCT TTTGATGCTTAATATGACTTTACATTTTAGATTTAGCATCAGACGCCTGAGATTTTACAGGACACAAGCGCAGGAAAATT TGATCTATCAACTAATAAATGTTTTATTTTTTTTGATAATATCAACCAGGTTGTCTAAATGACTCATAATAAAATTTGGG TTAAATAACTCATCATCCAATCATATTGAAAATAAGTGAGGTGGAATTTCTATATTTTATTTATTAATTTATTTCCAACT CACTTATCTCCA
CDS sequence (LotjaGi1g1v0314900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTACTCTGCATCAGATTACTCTGCCTCTTCTGAACATGCTTCTTTATATTACATTAATCATGCACAGCACAATAAG CACCTCACGGGTGGACCTCACACTTGGTTTCATTCATCTCCCACTAAACTCCTCCAATTTGCGCCATCACAAGCCATACA ATTTACCCCTACACAAACGCTACAGCTTTAGACACGGAGTACACAAGCTTTGGGTACACTCCACAGACAAACCTTTGTAC CGAAATAGCCCAACCAAGCCTAGATCAGAAATCCGCATTGCTGGCCACGATTACTCTTCTGGGGTATGGCAATTTGAAGG GCAGGGGTATGTGCCATGTGGTACTTCTGGCGTTTCCATCATGCAAGTGTTTGGGTCAGATCCTCCACATGCGACCACCT TAATGGTTAGAACCTATAACGGGTCTCTTTCATATTATAGGGGTCCTGTTCTGGTTCAAAACATCTGGGATAGATGGTTT TATTTGAATGTGATCCATGATGTGGAGGCTTGTAATGTGAAGGTTTATGTTGATGGGGTTCTGGTTTTAGAAGCACCGGG TCGTGGAGGGAGCTCCCATTACTTCAAATTTGGAGTTTATGCACAGAATGATCCTTCCTACTACATGGAGTCCCGGTGGA AGGGAATCAGAGTTCTCAAAAAATGTTCATGA
Protein sequence (LotjaGi1g1v0314900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTLHQITLPLLNMLLYITLIMHSTISTSRVDLTLGFIHLPLNSSNLRHHKPYNLPLHKRYSFRHGVHKLWVHSTDKPLY RNSPTKPRSEIRIAGHDYSSGVWQFEGQGYVPCGTSGVSIMQVFGSDPPHATTLMVRTYNGSLSYYRGPVLVQNIWDRWF YLNVIHDVEACNVKVYVDGVLVLEAPGRGGSSHYFKFGVYAQNDPSYYMESRWKGIRVLKKCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| PANTHER | 9 | 221 | 213 | 1.8E-104 | – | |
| PANTHER | 9 | 221 | 213 | 1.8E-104 | – | |
| SUPERFAMILY | 81 | 208 | 128 | 2.64E-19 | ||
| Pfam | 81 | 218 | 138 | 7.1E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0314900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…