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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0318300 |
| Transcript ID | LotjaGi1g1v0318300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT5G64600.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|G7JBI4|G7JBI4_MEDTR O-fucosyltransferase family protein; Found in the gene: LotjaGi1g1v0318300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:76653378..76657117) extracted from Lotus japonicus Gifu genome v1.2.
TTTATCCTACAGATATCAGACATGGTGGCAGTGGCACATATAATGAATGCAACTTTAGTCATTCCTCAATTGGATAAACG TTCATTCTGGCAAGACTCAAGGTATATCTGGGTATACTTTATTTTTGCATCATTTGGTTCTTTAGATGCATATTATTTCC TTTTCCAATATTATCTTCTTTTTTATTGGATGTGTGCGCAGTGTATTTTCAGATATATTTGATGAGCTTCATTTCATTGA GTCCCTGAAAGGAGATATCAAGATTGTGAGGGAACTTCCCAAGAACTTGGAAGGTGCCCCCCGGGCCAGGAAACATTTCA CTTCCTGGGCTGGAGTTGGTTACTATGAAGAAGTGGCAAGGTTATGGAACGACTATCAGGTACTCAAGTTTTTCCTATAC GATCTACAAGTTCTGGTGGTTCTCATTTTCTGCAGAAAGTTTCACTGTAAAACATGCTAATTGGTAAACTTAGTTTTGCT TGCTTAATCTCAAATCAGCTCTCAGTGAAAATTATTACTTCAATTTTCTGGCATATGATTCCGAATAGTTCTGTTTGTGA AATGTAGCAGTATGATTGAACACCAGAGACACTTTTATGCTCCAATCCATCCGTTTCTTCTTTAATATAGACAATGGAAA AACATTGCAGAAAAGGAAACGAGGAATAGGCTGGCAATTCAAAGTAAACATTTCACATTTGTATGAATGTGGGAATTGCA GTTTTATTACAACAATTCATATAGTTGCAGCAAGGAGTTTGTATGCAATCTAGTTGACAAATTTTTCCCATTAAAAAAAT TTAGTAATATATATTGAAAAATGTTAGGCAGTGAATGTTTTGCTACATATTTTACGGGGCAGTTTAATCATAAAAGGACA TGGAATGCTACTGCTTTACTATCCTACCGCTGTCATTACCATATAGAAGAATAAGATATGGATGCATAGTTGTATGCCAG CATTGTTGTTCACTTACATTTTAAATCAATTGTCTTCTAATGTAGTACAATGTTAAACATGTTTTGGTAGATGTCTGATT TAAGTTTTGAGGACCATATTAGATTTTTTGCTGACATTTATTGATTGCTTACTTCTGGGTATGTGCAAACTTAATATCCA TTCTCAGTGGAAGGAATTTCTGTTTATGTTCTCGCTTAGCTAGTGAATTTATCATTGCGCTTCTATGGTTCCTTATATTT CTGTTTTTTTTTTAATTTTGCTATTGACTGTATTTCATAGTCTGAAGGTCTGGAGCAATGATTTATTTTCCAGGTGATAC ATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTGGACATCCAGAGACTGAGATGCCGTGCAATGTAT CAGGCACTCCGATTTTCTCCTCCTATTGAGGATCTAGGAAAGGTTTGACTTTTTTCTGGTGTGTCATTTCTAGTGTCCTA AGTATCTCAAAAAGATATCATCTGTGCATCATATTTGGATTTGGTGACTGATAAATAAAATGATGGAATGGAGATTAAAG AGGAATAACTGATTTGATTCCTGTGTGATCTTTTTTCTTAATAAGTTATAATATGAACCAAATTGTAGCATTTTTTAATG GATCAATTTAGAGAGAATAAAAATGGGAAACATACCTGAAAAGATACAAATTGAAATGAAATGTGATTTTCTCCTTCCCA TTTTGTGCCTAAATAATTGGAAAACTAAGGATATTTGTAGTTTAAAATTGTCTGTGGGAGTTTGGAATGTGAGGCTGACA TATGTTTGTCTCATTGCCATCTCTTTAATGATTACTGTATAAGAAGTACTATATTGAATTATTTAAATAGTTTGAATGCT GAAAAGTTAATTGGTTTAAAACCTTGTGAGTTCAAGTCCTATATTTCTGCATGTCATGCTAGAAAATGATGCATGTGATC CCAGGATTGCAATATGCTTCACTTTTGGTGCATTTAAGATGTCTATGTGGGGGCTTCCTGCTAAATTAGGTTCTGAGCAT ACATGACGGTGAAAAAACAGAGGTTGGTGGATCGGTTGAGATCACGCTGGGGAAGATACATCGCTCTCCATCTCAGATAT GAGAAAGATATGCTGTCTTTTACTGGCTGTGCATATGGTCTGACGGATGCAGAATCTGAAGAGCTGAGAGTTTTGAGGTG AAACTAGTTACTATGTATATGCTAGCTGCCTTGTGTTTGAAATATATATAACCTTAGAAATACATAATTATTCTGCTCAT CTTTTTTCTAAGAAACATTTGTTTTAATTCTTCTAGGGAGAGTACAAATTATTGGAAAGTGAAAAAGATAAATGCAACAG AACAGAGAATTGGAGGATTTTGTCCGTTGACTCCAAAGGAGGTGGGTGTTTTTCTTCTAGCTCTCGGGTTTCCTCCATCA ACACCAATATACATTGCAGCGGGGGAGATCTATGGTGGTAACACTCATCTTTCGGAGCTCTCCTCCCGTTTCCCTAATCT AGTCTTTAAGGTGTGGAGATCATTTTGCTGTCGAATTGTATTAAATAGTTCAATAGCGCCTCATCTGTGGTTGAGGTGCA GCATTGGCCTGATTAATTGATTGATAGATGATAACAGGAACACCTTGCAACTCCTGAAGAGCTGAAAGCTTTCACCAATC ATGCATCTCAAAATGCTGCAGTTGATTACATAATCTCTATTGAGAGCGATGTATTTGTTCCGTCATATTCAGGAAATATG GCAAGGGCTGTTGAGGGACACCGCAGATTCTTAGGTCACCGCAAGACAATTAACCCAGACAGGTACTGAATACATTTCAA CCACTTCCAGGCTTCTCTTCTTGTTTTTCTTTCTTTTTCTTTTTAATTTCCATGCTGGCCAAAATGTTGTTTTTTGTTCC TTAAATGTTCTGTATTTACGTTAGAAATTACTCAGCATTCAGAAACAACAGCAATCAAAGTCTTATCCCACTAGTTGGGT TTTGTTACATGGACTAAATGAGGCCATCATATCCTATCATGAATATGTCTAATGAGTAATTACAGAGCAGTTAATTCCAA ATGTTTCTTTATAGTTTGAATTATAGTTTTTCTTGGTTTTCCTTTATTTCTAACTATTGTACCATCCTTCAATTGGTGTT TCTATGGTTTTTCTCCACACATGTTCAAAAGATAAAGAAAATGCCATTTTATATTTGATTCTTCAATTTATTTCTTTTTA ATTTTCTCATTCATTTTATTTTTAGGAAAGGACTTGTTGAAATTTTTGATAGGCTGGAAACTGGAGACCTAAAAGAAGGA GAGCCACTGTCACATCTGGTGCAGCAGATGCACAAGAACAGGTTTGTTTCTGGCATAATGTCACTAGATTCCCATTCTCT TTAGTTTCTGATGTGACCTTATTATGTAATGACTTGATAATTAGAAAAAAATTATTTACAACTACATTTTTCTTTAATAT AGAACTTTATTATCTTGTTCATTTTAATCTGTACTTATTTCTTTCCATTTAATCTGCAATCACTTGTTCTTTCACCTATC ACCTCTAGTTGATTTCATTTTGCAAGTTTCTGAAATAAAAAGAACTTTGCTTATTTTTCATGATTATATTTATACGTGTA GGGAAGGAGCTCCAAGGAAAAGACAAGGCTCCCCACCAGGAATTAAAGGGCGAGCACGGTTTAGGACTGAAGAATCCTTT TACGAAGATCCATACCCTGAGTGTATATGTGGCTCTAGAAGCAAACTAGAAAGAACATGA
CDS sequence (LotjaGi1g1v0318300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGCAGTGGCACATATAATGAATGCAACTTTAGTCATTCCTCAATTGGATAAACGTTCATTCTGGCAAGACTCAAG TGTATTTTCAGATATATTTGATGAGCTTCATTTCATTGAGTCCCTGAAAGGAGATATCAAGATTGTGAGGGAACTTCCCA AGAACTTGGAAGGTGCCCCCCGGGCCAGGAAACATTTCACTTCCTGGGCTGGAGTTGGTTACTATGAAGAAGTGGCAAGG TTATGGAACGACTATCAGGTGATACATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTGGACATCCA GAGACTGAGATGCCGTGCAATGTATCAGGCACTCCGATTTTCTCCTCCTATTGAGGATCTAGGAAAGAGGTTGGTGGATC GGTTGAGATCACGCTGGGGAAGATACATCGCTCTCCATCTCAGATATGAGAAAGATATGCTGTCTTTTACTGGCTGTGCA TATGGTCTGACGGATGCAGAATCTGAAGAGCTGAGAGTTTTGAGGGAGAGTACAAATTATTGGAAAGTGAAAAAGATAAA TGCAACAGAACAGAGAATTGGAGGATTTTGTCCGTTGACTCCAAAGGAGGTGGGTGTTTTTCTTCTAGCTCTCGGGTTTC CTCCATCAACACCAATATACATTGCAGCGGGGGAGATCTATGGTGGTAACACTCATCTTTCGGAGCTCTCCTCCCGTTTC CCTAATCTAGTCTTTAAGGAACACCTTGCAACTCCTGAAGAGCTGAAAGCTTTCACCAATCATGCATCTCAAAATGCTGC AGTTGATTACATAATCTCTATTGAGAGCGATGTATTTGTTCCGTCATATTCAGGAAATATGGCAAGGGCTGTTGAGGGAC ACCGCAGATTCTTAGGTCACCGCAAGACAATTAACCCAGACAGGAAAGGACTTGTTGAAATTTTTGATAGGCTGGAAACT GGAGACCTAAAAGAAGGAGAGCCACTGTCACATCTGGTGCAGCAGATGCACAAGAACAGGGAAGGAGCTCCAAGGAAAAG ACAAGGCTCCCCACCAGGAATTAAAGGGCGAGCACGGTTTAGGACTGAAGAATCCTTTTACGAAGATCCATACCCTGAGT GTATATGTGGCTCTAGAAGCAAACTAGAAAGAACATGA
Protein sequence (LotjaGi1g1v0318300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVAVAHIMNATLVIPQLDKRSFWQDSSVFSDIFDELHFIESLKGDIKIVRELPKNLEGAPRARKHFTSWAGVGYYEEVAR LWNDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYQALRFSPPIEDLGKRLVDRLRSRWGRYIALHLRYEKDMLSFTGCA YGLTDAESEELRVLRESTNYWKVKKINATEQRIGGFCPLTPKEVGVFLLALGFPPSTPIYIAAGEIYGGNTHLSELSSRF PNLVFKEHLATPEELKAFTNHASQNAAVDYIISIESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVEIFDRLET GDLKEGEPLSHLVQQMHKNREGAPRKRQGSPPGIKGRARFRTEESFYEDPYPECICGSRSKLERT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 381 | 381 | 1.6E-240 | – | |
| PANTHER | 1 | 381 | 381 | 1.6E-240 | – | |
| Pfam | 1 | 297 | 297 | 8.5E-61 | ||
| CDD | 1 | 303 | 303 | 2.42783E-146 | ||
| PIRSF | 1 | 380 | 380 | 1.4E-149 | ||
| MobiDBLite | 337 | 364 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0318300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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