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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0322800 |
| Transcript ID | LotjaGi1g1v0322800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amino acid permease; TAIR: AT2G01170.1 bidirectional amino acid transporter 1; Swiss-Prot: sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog; TrEMBL-Plants: tr|I3SR81|I3SR81_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0322800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:77431517..77434674) extracted from Lotus japonicus Gifu genome v1.2.
ACCTTAGCGGAAGGAACAGGAAACAGCACAGCTATGGATTCAGCAGAGAAGAGGCTCAATGAGCTTGGTTACAAGCAAGA ACTCAGAAGAGAAATGGTTATTCTTGATCTTGATTTTGTGAGAATAAATCAACTTTTTCTTGTAATTAACTCTGTTAAAC TCTTCTATTTATCTTGCAGACTATGTTCAAAACTCTGGCAATATCATTCTCAACAATGACCCTTTTCACTGGAATTACTC CTCTCTTTGGTTCTAGCCTTCAATATGCAGGCCCTGCAACTCTTGTCTGGGGATGGCTAGTGGTTTCTTTCTTCACTTGC TTTGTGGGAGTTGCAATGGCTGAGATATGCTCATCGTTCCCGGTTTGTCTCTTCTTATAAAGTTTAGTTATGTAATTTTG TTGAGTAGCGGTGGCACTTTAAGGCTTAAAGGTTAAAGTATAATCTCTGAAAACATGTTTGATGTCCAGATGGAAAACGG CAGAATAAATTTTGGTAGATTAAAATCAATTGTGGATGAAAATATGATGTTTGGTAGTTATTTTGGAGAATTGATTTCAG ACCCAAAATTATTCTTGTAGAAGCTAAAGAGAGTAGCTTATGCGTTGAACATAATAAATTGTGAGATTGTACAAGTGAAT TTCACACCATCACCCAACAAAAATTCACCTTTTCATAAATGTATGCAAATATAAATCACTTCACTTTCAACTCACTTTTA CTATAATCAATTTTACCAAATTCAATTTTTGATAAATTCGGATACAAATATGCACGCATCTCCCTAGAATTGGTTCTGTG TTACACATCATTTAGGGAGATAGTTAGTGTGGCTATATAAGTAGAGTCCACCATTGTAATTGGTATGTTGTTAATGATAA TGATACTCTTTTCCCTTGTTTCCCTCTCTATTCTCTTTGTTCTTCCCTCTCTCCCTAATTCTATCCCTAACATTCTGACT TTAGAATCAATTATAGAAGGATTTCAAACATGTACTCAATTTATGAAACTAATTTACCCTTCATGTTCAATCTAACAGAC GACTGGTTCTCTGTACTTTTGGGCTGCTCATTTAGCTGGTCCCAAATGGGGACCATTTTCTTCATGGTGCTGTGCTTGGC TTGAGACAATAGGGCTTATTGCCGGGATAGGGACTCAGGTACTTAAACTTTGGTCAAATTTCTACTTACGCTAATGCAAA ATCACAGTGGACACTCACAAAAGCTATTGCTTCTGTCCATCGTGATTTTGGCTTCACAATGGTTTTCGCTGCGTATCCAA ACATACAAAGTTTTTAAGAAAAAAGTTTTCATGGTAACTCATGCTTTTCATGGTTGGAAAAAAGGCATATGCAGGATCAC AAACATTGCAGAGTATAATCCTACTTTCAACCGGCACAAATAAAGGTGGAGGGTACTTTGCCCCAAAATGGCTTTTCTTA TGTATGTACATTGGCCTCACTGTTATCTGGGCAGCACTGAACACGTTTGCACTAGAAGTGATTGCCTTGATCGACATGAT TTCAATATGGTGGCAGGTACTTTTTCTTCTTTGTATAACAATACTGCATTTGGATGGCCTAAGCTAGCTCAGTGCTTGTT TGAAAACTCTAAAATCATGGTGTAGAGAAGCAACTTCCCTTAACTTTTACTTCTGTTCACCATAATTTTGGTTTCACTGT GGTTTCAGAATGAGTTTCCAAACATGCATTTATTCTGTGATTAAGAGAAAATAATAGAAGTGAGAGAGAAGGTTATATTT TTACTTGATTAAACCCCAATAATATTTACTTCTGGATTTGCTTATGCTATAATTGTTTATTTCTATCAAAATTGTTGAAA TGTAATTCACAATATGCTCAACAATTTGAAGGTTTTTTTGTGTGTTAGAAGGTAATGCCCTCATTCATTGTGTCAGGTTA TTGGTGGAACAGTGATAGTGATATTGTTACCTCTGGTAGCACCAACTACAAAATCTGCATCATATGTATTCTCACACATG GAATTGGCCACTGATACAACAGGAATATCAAGCAAACCATATGCAGTCATTCTATCATTTCTTGTCAGCCAGTATTCCCT CTATGGATATGATGCTGCAGCACATCTAACTGAAGAAACTAAAGGTGCAGACAAGAATGGACCCATTGCAATACTAGGTA GTATTGGGATCATTGCCGTGTTTGGATGGGCTTACATCTTGGCACTTACATTCAGCATTCAGGTAAGAATATCTAAGTTT ATCTCAGGAATAAACATCTTCAAGATATGATCAAGCAATAAAAAAACACTTCTTCCCCTCTTTGCCCCCAAGGAAAATGA CTTTATGAAGCATGTTAGAATTTAGAACTCAATGCATATGTAGATATAAAAATGTAAATGAAGATAGTCAAAATTTTCAA GCAAAATTTAGGCTGAGAGATTTTCAGTTTATCATCTTCTGAATGGCCAAGAGAGTATATAGCATCAAGTGAGGGTTCAT TTAGTTCGCTTGTCATGTTGACTTAGTGCATGTTTGGAAACCTTTCTATAATTGATTTGAAGTCAGAATCAATTCTAGTG AGAAGCTCCTGGATTTCTGAATTGATTCTGCCATAATTGATTCTGAAAGACAAACTGATCCAAACATGCTATTAAACTAT ACCGCTTTTGTCCAAAGGACGATAGTAACACCAGTTTTCAACTCTCTCAGGATTTTGGTTACCTTTACGATCCAAACAAT GAGACGGCTGGAGCATTTGTGCCAGCACAAATACTCTATGATGCATTCCATGGAAGATATCACAATTCTGCTGGAGCAAT CATTATACTATTTATCATTTGGGGCTCATTCTTCTTTGGTGGACTTTCAATCACTACAAGTGCTGCCAGAGTGGTAAGTG AAGTAACTTTATGTCTCTTTGTTTATTAGAATGGTAAGTGGGAGGTCTAGCTTCTAATTTACATCCTTTGCAACTGCTAG AAGTTATCTTTTGTGAGAATGGAAGTATTAGGTTATCCAATTTTTAGCTGTAATTTAGATTACTTATGTGAGAAGGGAAA TTGATTTGTAGATATCCACATGGTGCAGGCACCCAACAGACACCCTGAGAAAGAAATAGAAGAGAGAGAAGTACTGAATG TGATATGTGATGAATGTGATAAGAAGAGAGATAGATAG
CDS sequence (LotjaGi1g1v0322800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCAGCAGAGAAGAGGCTCAATGAGCTTGGTTACAAGCAAGAACTCAGAAGAGAAATGACTATGTTCAAAACTCT GGCAATATCATTCTCAACAATGACCCTTTTCACTGGAATTACTCCTCTCTTTGGTTCTAGCCTTCAATATGCAGGCCCTG CAACTCTTGTCTGGGGATGGCTAGTGGTTTCTTTCTTCACTTGCTTTGTGGGAGTTGCAATGGCTGAGATATGCTCATCG TTCCCGACGACTGGTTCTCTGTACTTTTGGGCTGCTCATTTAGCTGGTCCCAAATGGGGACCATTTTCTTCATGGTGCTG TGCTTGGCTTGAGACAATAGGGCTTATTGCCGGGATAGGGACTCAGGCATATGCAGGATCACAAACATTGCAGAGTATAA TCCTACTTTCAACCGGCACAAATAAAGGTGGAGGGTACTTTGCCCCAAAATGGCTTTTCTTATGTATGTACATTGGCCTC ACTGTTATCTGGGCAGCACTGAACACGTTTGCACTAGAAGTGATTGCCTTGATCGACATGATTTCAATATGGTGGCAGGT TATTGGTGGAACAGTGATAGTGATATTGTTACCTCTGGTAGCACCAACTACAAAATCTGCATCATATGTATTCTCACACA TGGAATTGGCCACTGATACAACAGGAATATCAAGCAAACCATATGCAGTCATTCTATCATTTCTTGTCAGCCAGTATTCC CTCTATGGATATGATGCTGCAGCACATCTAACTGAAGAAACTAAAGGTGCAGACAAGAATGGACCCATTGCAATACTAGG TAGTATTGGGATCATTGCCGTGTTTGGATGGGCTTACATCTTGGCACTTACATTCAGCATTCAGGATTTTGGTTACCTTT ACGATCCAAACAATGAGACGGCTGGAGCATTTGTGCCAGCACAAATACTCTATGATGCATTCCATGGAAGATATCACAAT TCTGCTGGAGCAATCATTATACTATTTATCATTTGGGGCTCATTCTTCTTTGGTGGACTTTCAATCACTACAAGTGCTGC CAGAGTGATTACTTATGTGAGAAGGGAAATTGATTTGTAG
Protein sequence (LotjaGi1g1v0322800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSAEKRLNELGYKQELRREMTMFKTLAISFSTMTLFTGITPLFGSSLQYAGPATLVWGWLVVSFFTCFVGVAMAEICSS FPTTGSLYFWAAHLAGPKWGPFSSWCCAWLETIGLIAGIGTQAYAGSQTLQSIILLSTGTNKGGGYFAPKWLFLCMYIGL TVIWAALNTFALEVIALIDMISIWWQVIGGTVIVILLPLVAPTTKSASYVFSHMELATDTTGISSKPYAVILSFLVSQYS LYGYDAAAHLTEETKGADKNGPIAILGSIGIIAVFGWAYILALTFSIQDFGYLYDPNNETAGAFVPAQILYDAFHGRYHN SAGAIIILFIIWGSFFFGGLSITTSAARVITYVRREIDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 356 | 356 | 3.0E-220 | – | |
| PANTHER | 1 | 356 | 356 | 3.0E-220 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| PIRSF | 4 | 356 | 353 | 2.2E-33 | – | |
| Gene3D | 16 | 353 | 338 | 8.1E-19 | – | |
| Phobius | 21 | 45 | 25 | - | – | |
| Pfam | 23 | 350 | 328 | 5.6E-36 | ||
| TMHMM | 27 | 46 | 20 | - | – | |
| Phobius | 46 | 56 | 11 | - | – | |
| TMHMM | 56 | 78 | 23 | - | – | |
| Phobius | 57 | 78 | 22 | - | – | |
| Phobius | 79 | 150 | 72 | - | – | |
| TMHMM | 99 | 121 | 23 | - | – | |
| Phobius | 151 | 171 | 21 | - | – | |
| TMHMM | 153 | 175 | 23 | - | – | |
| Phobius | 172 | 182 | 11 | - | – | |
| TMHMM | 182 | 204 | 23 | - | – | |
| Phobius | 183 | 201 | 19 | - | – | |
| Phobius | 202 | 262 | 61 | - | – | |
| TMHMM | 228 | 250 | 23 | - | – | |
| TMHMM | 263 | 285 | 23 | - | – | |
| Phobius | 263 | 287 | 25 | - | – | |
| Phobius | 288 | 323 | 36 | - | – | |
| TMHMM | 322 | 344 | 23 | - | – | |
| Phobius | 324 | 347 | 24 | - | – | |
| Phobius | 348 | 359 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0322800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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