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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0329200 |
| Transcript ID | LotjaGi1g1v0329200.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT2G40980.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6RET6|CCAMK_PEA Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase; TrEMBL-Plants: tr|I1JXV1|I1JXV1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0329200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78435151..78437544) extracted from Lotus japonicus Gifu genome v1.2.
TTGATGATACACAAGCTTGGTGCTGCATACTCTGATGTACATCTGAAATACATCTAATGATAGTATCATACAAATAGTGC CATCCCACTCTGGTTATTAATCTTTTTTCTTGGTTCTGCTTCTTATGTCTTTGTTCTCTTCTCATTTATTATGTTTTCAT GCTTGGAGTAGTTTTCCCATGAAAAAGCATTAGCATTTCTCCCATAATATATAGTCGTGACTATTTTTTATGAATATAAC ATGGTTTTCTATGTGGCAGTTATTTCTACTAGTAATGTCTCTGAGACCTCAGGAATGAGCAAGTTTGTTCCTATATCCAG AAGAGTTTTAAAGGGGCTCAAGGAATATGGAAGGAAACTGGTTGACCTGGAGTTATTCACACAGTATCTTGAGGAATGGG TCTTGGAGAATCTAAATGGTGATTCAGCAGATGGGTCTCAAAGTTTTAGTTCTCCCTTCACGATTGATGAGTTGCGCAAG CTTGATTTGGCATTAGAGGGGGTTCCATTTCAGCAATTGGTTCGTATGCCAATCCTCTCTGAGGTTTCTGATGACTATTT GGAAGATCAGTATCTAGCAGCAGAAGATTTCCTTCACGCCATCATCATTGGCCTTTGGCGTACATTTTGGCATAAAAGTG GACCACTGCCATTATGTGTCTCCTGCCCCTCTCATGTTGGTTCTAAGTTCAGCAGTGTGGAGAAAGCAATGTCAAGGGGA AGGTTGAAGGAAATGCGCGGCTTAGCTCTAATATCAAAAAATGAGAGTGATTTGAGATTCAAATGGGATCAGGTGGTAGA GTTTGCCTTATTCAAGCCAGAAGTAATCTTGGACAATGTTTTGAGAGTGTCAGCCAGTACTATTTGTGAAGCTCTCTTTT ATGGCTTCCATGTTCTCGTTTCGCGCAGTTTGAGCAAGATAAGTTCAATTAACAGTGATTCTGTTTTTCTGCTAGTTCTT GATTCTAAGTGTGGCACGGTGATGAAGCTCAGTGGTGACCTTGGCAAACTTGATTTGCTAAATTCAAGCAATCCATATCT GTCTGTGGCTGAATGGATAAAAACTCATGCTGAAATTTGTGTCACCCGGGCGGAACCAATATGGAACAGATTGGGAAATG CCAAATGGGGGGATATAGGAACTCTGCAGATACTATTGGCAACTTTCTACTCTATTGCCCAGTGGAACGGACCGCCACGA AAATCAGTTGCCTCATTAATCTCAGATCACAGCCTTCGCCTTCAGAAGCGCCGGACAGAATGCTGCATCGTTGAGACTGA AAATGCACTGATTCCTTATCATGGTGCAGGAGAGATTGTTGAACTTGACCAAAATGAGTTCTTTTCCAAAAATCGAGCCT CACGTCTGAAGCTGAAGCACGGCGACATATTGGTCTTGGATGATCCGCAGCAGGGTCAGAAAAGTTTCCAAATTCATGAA TCTTTGGTCGGAGGGAACTACTATCTCTATGGTTCAGTGTGTCTTGATCATCCTTCAGAGTTATTGTCTTTATATGTAGG TGCTCATCCATCTAGACTTGAGCCTTCTTGGGAGGATATGAGCCTCTGGTATCAAGTGCAACGTCAAACAAAAGTGCTAA ACATTTTGAGGAATCAAGGAATCTTGAGCAAACATTTACCCGAAATTGTTGCCTCAGGTAAGATTGTACATTCCGGTCCT TGCAAGAAAGAAAGCCCTGGAGGAAAGTGTGATCATCCATGGTGCGGCACTCCGATTCTGGTGACATCTCCGGTAGGGGA GCCACTAACATCTGTAATTGCTCATGAGGGGACATTTTCTGCTGATGAAGCAACGCGCTTATGCCGAGACTGTCTCGCCG CTCTCAGAAGCGCAGCTGTGGCTAATGTCCAGCATGGTGATATCTGTCCAGAGAACATAATACGTGTTGACGAAAGACAA GGAGTTGCAAATAACCAAGCAATGTATGTCCCGATATCTTGGGGGCGCGCCGTGTTGGAAGATAGGGATAGCCCTGCTAT AAACTTGCAATTCTCATCATCTCATGCACTTCAGCATGGGAAGCTGTGTCCATCTTCTGATGCTGAAAGCATTGTCTACA TTCTTTATTTTATCTGTGGAGGGACCATGAGTCAACAAGATTCTATTGAGTCTGCTTTGCAATGGAGAGAGCGAAGCTGG GCGAAGCGCGTGATCCAGCAACATCTTGGTCAGGTTTCTGCTCTCTTGAAAGCATTTGCTGATTATGTTGATAGCCTTTG TGGAACTCCATACCCTGTTGACTATGATATATGGTTGAAGAGGCTGAACAAGGCTGTGGAAGGATCAGCAGATAAAGGTA AAATGATTGAAGAAATGGCGGTAACTTTGAGATTAGAAGATGCTGCAGAGTCTTCAGGAGCTTCTGGCTCTTGA
CDS sequence (LotjaGi1g1v0329200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCAAGTTTGTTCCTATATCCAGAAGAGTTTTAAAGGGGCTCAAGGAATATGGAAGGAAACTGGTTGACCTGGAGTT ATTCACACAGTATCTTGAGGAATGGGTCTTGGAGAATCTAAATGGTGATTCAGCAGATGGGTCTCAAAGTTTTAGTTCTC CCTTCACGATTGATGAGTTGCGCAAGCTTGATTTGGCATTAGAGGGGGTTCCATTTCAGCAATTGGTTCGTATGCCAATC CTCTCTGAGGTTTCTGATGACTATTTGGAAGATCAGTATCTAGCAGCAGAAGATTTCCTTCACGCCATCATCATTGGCCT TTGGCGTACATTTTGGCATAAAAGTGGACCACTGCCATTATGTGTCTCCTGCCCCTCTCATGTTGGTTCTAAGTTCAGCA GTGTGGAGAAAGCAATGTCAAGGGGAAGGTTGAAGGAAATGCGCGGCTTAGCTCTAATATCAAAAAATGAGAGTGATTTG AGATTCAAATGGGATCAGGTGGTAGAGTTTGCCTTATTCAAGCCAGAAGTAATCTTGGACAATGTTTTGAGAGTGTCAGC CAGTACTATTTGTGAAGCTCTCTTTTATGGCTTCCATGTTCTCGTTTCGCGCAGTTTGAGCAAGATAAGTTCAATTAACA GTGATTCTGTTTTTCTGCTAGTTCTTGATTCTAAGTGTGGCACGGTGATGAAGCTCAGTGGTGACCTTGGCAAACTTGAT TTGCTAAATTCAAGCAATCCATATCTGTCTGTGGCTGAATGGATAAAAACTCATGCTGAAATTTGTGTCACCCGGGCGGA ACCAATATGGAACAGATTGGGAAATGCCAAATGGGGGGATATAGGAACTCTGCAGATACTATTGGCAACTTTCTACTCTA TTGCCCAGTGGAACGGACCGCCACGAAAATCAGTTGCCTCATTAATCTCAGATCACAGCCTTCGCCTTCAGAAGCGCCGG ACAGAATGCTGCATCGTTGAGACTGAAAATGCACTGATTCCTTATCATGGTGCAGGAGAGATTGTTGAACTTGACCAAAA TGAGTTCTTTTCCAAAAATCGAGCCTCACGTCTGAAGCTGAAGCACGGCGACATATTGGTCTTGGATGATCCGCAGCAGG GTCAGAAAAGTTTCCAAATTCATGAATCTTTGGTCGGAGGGAACTACTATCTCTATGGTTCAGTGTGTCTTGATCATCCT TCAGAGTTATTGTCTTTATATGTAGGTGCTCATCCATCTAGACTTGAGCCTTCTTGGGAGGATATGAGCCTCTGGTATCA AGTGCAACGTCAAACAAAAGTGCTAAACATTTTGAGGAATCAAGGAATCTTGAGCAAACATTTACCCGAAATTGTTGCCT CAGGTAAGATTGTACATTCCGGTCCTTGCAAGAAAGAAAGCCCTGGAGGAAAGTGTGATCATCCATGGTGCGGCACTCCG ATTCTGGTGACATCTCCGGTAGGGGAGCCACTAACATCTGTAATTGCTCATGAGGGGACATTTTCTGCTGATGAAGCAAC GCGCTTATGCCGAGACTGTCTCGCCGCTCTCAGAAGCGCAGCTGTGGCTAATGTCCAGCATGGTGATATCTGTCCAGAGA ACATAATACGTGTTGACGAAAGACAAGGAGTTGCAAATAACCAAGCAATGTATGTCCCGATATCTTGGGGGCGCGCCGTG TTGGAAGATAGGGATAGCCCTGCTATAAACTTGCAATTCTCATCATCTCATGCACTTCAGCATGGGAAGCTGTGTCCATC TTCTGATGCTGAAAGCATTGTCTACATTCTTTATTTTATCTGTGGAGGGACCATGAGTCAACAAGATTCTATTGAGTCTG CTTTGCAATGGAGAGAGCGAAGCTGGGCGAAGCGCGTGATCCAGCAACATCTTGGTCAGGTTTCTGCTCTCTTGAAAGCA TTTGCTGATTATGTTGATAGCCTTTGTGGAACTCCATACCCTGTTGACTATGATATATGGTTGAAGAGGCTGAACAAGGC TGTGGAAGGATCAGCAGATAAAGGTAAAATGATTGAAGAAATGGCGGTAACTTTGAGATTAGAAGATGCTGCAGAGTCTT CAGGAGCTTCTGGCTCTTGA
Protein sequence (LotjaGi1g1v0329200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKFVPISRRVLKGLKEYGRKLVDLELFTQYLEEWVLENLNGDSADGSQSFSSPFTIDELRKLDLALEGVPFQQLVRMPI LSEVSDDYLEDQYLAAEDFLHAIIIGLWRTFWHKSGPLPLCVSCPSHVGSKFSSVEKAMSRGRLKEMRGLALISKNESDL RFKWDQVVEFALFKPEVILDNVLRVSASTICEALFYGFHVLVSRSLSKISSINSDSVFLLVLDSKCGTVMKLSGDLGKLD LLNSSNPYLSVAEWIKTHAEICVTRAEPIWNRLGNAKWGDIGTLQILLATFYSIAQWNGPPRKSVASLISDHSLRLQKRR TECCIVETENALIPYHGAGEIVELDQNEFFSKNRASRLKLKHGDILVLDDPQQGQKSFQIHESLVGGNYYLYGSVCLDHP SELLSLYVGAHPSRLEPSWEDMSLWYQVQRQTKVLNILRNQGILSKHLPEIVASGKIVHSGPCKKESPGGKCDHPWCGTP ILVTSPVGEPLTSVIAHEGTFSADEATRLCRDCLAALRSAAVANVQHGDICPENIIRVDERQGVANNQAMYVPISWGRAV LEDRDSPAINLQFSSSHALQHGKLCPSSDAESIVYILYFICGGTMSQQDSIESALQWRERSWAKRVIQQHLGQVSALLKA FADYVDSLCGTPYPVDYDIWLKRLNKAVEGSADKGKMIEEMAVTLRLEDAAESSGASGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 698 | 697 | 0.0 | – | |
| PANTHER | 2 | 698 | 697 | 0.0 | – | |
| Gene3D | 372 | 694 | 323 | 4.3E-8 | – | |
| SUPERFAMILY | 478 | 667 | 190 | 1.73E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0329200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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