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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0332800 |
| Transcript ID | LotjaGi1g1v0332800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DCD (Development and cell death) domain protein; TAIR: AT5G61910.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|A0A1J7GCP4|A0A1J7GCP4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0332800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:79023579..79029184) extracted from Lotus japonicus Gifu genome v1.2.
CATAAATTCGTTTGTGGGTCTTTTCTTGAGTCATGGTATCATCATCGTCAATCCCATTTCCTTTCCTTTCAAACTCGCGC TCTCTAGGTTCCTGGGTTCCTCTTCTTCCTCAACCTGACCTAGGTAACGCAACTCACTCTTTCTTTCTCTCTTTCTTTCT TTCTTCCATTTTCATCTTCTTCCATAATAATGCCCCGTTTGAATCGCGTTCAAATTCCCATTTTCATTCTCAGCACGCAC TATAGCCCTTGTTTTTCACTGTAATCGCGTTTTTCTTAGTTTCATTCATCTTAGAGGTTTCAAGTTTGATCAATGGAGTT CATCAATTTTGCCTAGTTTAGTGACTGGCTCCTACTATTCTTGATTTTCTGTGTCATAAAATTATAGCATTCCCTATTTG GTTTATGTTCTTGTTCCATGAATTGGTAAGTTTGAATCAACATGGATGACATTGTTCTGTGATTTGAGGAGTTAATCTGT TACTAATTTATGCAGTTATTCAGTAGAAGAAGAAGAAGAGGGCATGGAAAATGAGGAGAATCTTCCTGGTTTTATTTTCA TGTGCAACAGGATAACAAAGCCAGAGTGCTACCGGTTTCGAGTTTTTGGGCTACCTGCGGGGAGAAAGGATGTTGTGGCG AACATCAGACGTGGGACGTTCCTTTTTCTGTTTGACACTGATGTGAAGCTTCTCTATGGCATATATAGGGCTGACTCGAC CGGGAGACTAAACATTGAGCCGTTCGCTTTCGGTCGCAAATTTCCTGCTCAGGTGAGCTTTTAAATCAATTCATCATACA TAACGTATATAGAATTAATTGGTAGTTTATAGAAATTGTGTTGGTAGCTTAACCCAGCTGTTTGTGGCTTCAATTGTATT TACTATTTCTAGTGATTTGCCAGTTTAAACAATTCAGTGTAAATGCATAAGTGATGAGAAAGTTGTGGTAGCTCCTATTG TAGAATTAATAGTAATCTTGCCTTAGGTGGTTTGGGCGTGTATGTACATTGACAGTTCAATCGTTTGGGGTAGAGAGAGA CCTAAGAAAACTATAGGCAAATCATTTTTAGGGTTTTCTACAGTAAATAGTTTATCTATAAACTAAATATATGACAGAAC TTTATGGAGTAGACTGGCTCATGTATAGAGGGAAAAGGCTTAGATGATACTGGTGATGATGCGATGAACCAACTATGGAG TAATTTTCCAGTACTGTCACCCTTTAAGAGTGTTTACCCTTACCTTTGGGTATAATAAAAAATTAGCTCTTTTCTCAAAC TCATTTATTTGGCTAGTTCTAGAATCAGCTGGTCAACTTTTTTATGCTTCAGGGTTATAACTTGCCTGTTGAGTGTTACT TTCTTGATTTGCTTCTTGGACTAGATACGTATGGAGGAATATGTTTGGCTCTTGCTGGTTGTTCTGGTGTATGTGGAACT TATTAACATTGACTTTGTTTTAGTGTTGGCAGTAAACTAGTTAACCATACTGTAAATTGATTATTTTGAAGTTGTGACCA TTATTTTTTTCCCGTGTATGGTTGGCTAGTTGGCTTTATTGTTTTTCATAATCTTTCCTTGTTTTGGTCAATGTTTCATT AATTAACTTCATAAGTCATATAACTAGTTGAGGCTTTGAGGTTTCGACACCTGATGAATAAGTGCTTCTGATAACTCATG TACTCAAAATTGCATGGTGGCAACATCTAATGCACCCTATTTATTAATTGCTTAATGCTCAATTTTCCCATTTTCCAGCT GCCTGCTTTCATTTTTTTATAAAAAATTGTTCAGGTGAAATTCAACATTTACAAAGACTGTTTCCCCTTGCCAGAGAATC ATTTTAAACATGCCATTATAGACAATTACCAGAGAGGCTCGAACAAATTTAATCCTGAACTCAGCAGTGGACAAGTAAGT TCCATTTTAATCTCTTGCAAATTGATTTTAATTGCAATTATTACTCATTAGAGGCTTCTTTTGTTTTCTTTTTACTTTAC CTTTTTTTTTCGTAAAATAAATCGTTATGACTACTATGTCTTTTTTAGTTGCAATTTGTTTGTTCTATTGCAGGTAAGGA ATCTACTAGAATTGTTTCGCCCATTACATGTATTGTCAACAGCACCTCCACGTCCTGTTTTGAACGAGATATACTCTCCC TCTACATTGCCACTGCCACCAATGAATAATGTTTTTCATCAGACATCAAGGTCGTCTTTTGAGGATTCCTATTTTTCTAG GATGTCACCTAATCAAGCTCCAAGACAGTTGAACTACAGACATGTAAATGAGCTCGCAGAGCCTACTGGTTGGGCCTATC CAGTCAACAAATTGATTCCAAATTCAGCTGCTGAACATTCTGTGATATCCCAAGCGCCAAGGAATCAGCTTCATGCAGAA GCAGTATACGCAGTTACTCCAGAGGGAACTTATGCAGCTAGGACGGCCACCAGTTATACACTATCCCATCCTCAATATAC GCAGCAGGGTATCCTTAAGCCGCAACCTGAATTTCACACTCAGTCTTTGCATGATTCTCAACACGCTCATCTTAATGTCT TACATCCACAACATGATCTTCATCCCTCCATGATGACTATGCATAGTGGTTATGTTCAATCAATGCCAGATTCTCACCAT CAACATCATAATATCCTTAACCAACCAGCTGATTATCATTCTGCAGTGGCGAATACAGGCAGCAGTCATGCCCAAACGGT TATGCATAGCGGTTATGTTCAATCAATGCCAGATCCTCACCATCAACATCATAATATCCTTAACCAACCATCTGATTATC CCTCTGCAGTGGCAAATACAGGCAGCAGTCATGCCCAAACGGTTACGCATAGCAGTTATGTTCAATCAATGCCAGATCCT CACCATCAATATCATAATATCCTTAACCAACCAGCTGATTATCATTCTTCAGTGGCAAATACAGGCAGCAGTCATGCCCA AACGGTTATGCATAGCGGTTATGTTCAATCAATGCCAGATCCTCACCATCAACATCATAATATCCTTAACCAACCAGCTG ATTATCATTCTGCAGTGGCAAATACAGGCAGCAGTCATGCCCAAACGGTTATGCATAGCGGTTATGTTCAATCAATGCCA GATCCTCACCATCAACATCAGAATATCCTTAACCAACCAGCTGCAGTGGTGAATACAGGAAGCAGCCATGCCCAAACGGT TTGGGATCCTCACTATAACCACCACTATATCCTAAACCAACAACCCGACTCTTACTCCTCCATGGCTAATAGGGGCAGCA ATTATGCTCAATCATTACCATATCCTCAACACACACATCAGGAAGCCCAAAAAGCCAATGTTGTGATGCAGTCGCATGCT CAGTCATCATCATACTCTCCAACTCCACACTTACCCCAAGAAGTTGTCCCCGCCACACGTTCAGATCAAGGGTATTTTTT CAACTTTTCTTGGGTGAACTTTATTCCTATCCTTGAAATCCTTTAAATTATTTCTGCAACCTTTGTCTTAGATGGGGATT TATATTAATTCTCCAACATGATTCAATGACAAACTGTGATTAAGATTCCAGTGGAAAAAGCATTGCCCCGTATCCTCACT AAAGCATGAAAGTCAATTTATAAATTCATAATTGTTTTCTTAACAAGCATTACTGAGCTATGGACTTGTGCATTTTGCTT TCCAATGTGAAGTGAATTTTGTTTAGATCTAATGATGCTGCCGCTCCCCAGGTCAGGAGCCATACAAGAGGTGATATCCA GTGGTCAACAAACTGGAATGGGAAGTGGGTATTATCCGTCATCTACGCAGACAGAGGCGAATGTTTCTACTCAAGAGAAT GTTGTCAGCCACCTGCATTCAGCAAATACATATTCTCTGAGCTGATCCATGTCCAAGTATTGAGGGGCATATTGGTCTGG CAAGTTGGCATGTTCTATTTGCTGCCATATGCACAGAGGCCTCATGAACACACTGTTTAGTTACTATGTGAAGGTAGGGA GTTGGGTTTTTCAATTAAGTAGAAATTTGACATTAGTGGGGTGGGGATAGTGGCCTTCCTTTTCTATTGCTTCTCTCGCT TCCTATGGAGTCAAAAAGGCTGTAAATCAGGCTACTTTTGACTGCCATATGAATACACACCCAAGGGAAAGAGCTTCCAA TCTGGTGTACAAAGATTGACTGCTGCCATTTACTGGTATTGATCCACTAGGACCTTTTGTAGCATGTTTATCAACTTCTT TTTTCTTAGAATCAATTTTGTCACCCAGAAGCTTATCCCCATATTTAATTTTAGGTTTATAATCAATCGTAGAAAAATTT TCAAACATGCAATTTCCGGCAGCCGGGCCTTTTGCACTAACGTGTAGAAGGGGTACCCCATGGAGAAACTAGTAGTTATG ATAGTACTCCCTCCGTTCCTAAATAAGTGATACTATTTTGGTTCTTTTGTTGTTCCTATATAACTGATACTTTTAAAGTT TTAAGAGAGCATTAATTCTACTTTACCAAGTGTACCCTTCATTTATTGGTGGTAGAAAAGTTGAAAAGTTAGAATTAATA AGAGAGATAAAAGGTCTAATTGGAAGTTAGATAGTAATTTTAGTAAAATAAGAATATTAATTGCTATTTCTTAATACTCG TGCAACAACCTTAAAATACCAGTTATATAGGAACGGAGGAAGTATTAAATAAATTAATACTAGTTAATGGGCTAATACTT TATGAATCTAACACGCTCAATTTTAGGGTACAGAGTTTATGCAAGAATTTCTTATGCAAAGATGAGGTGTATTAATAGTT GTTTCCGCCGGTCTTTAAGATTCTGTTTTTGACATAGCTGAATTCACAAATGAATCATATTATTCTGGTAGTCCATCAAA GATGGCTTGAATTTTTTTCATTATTATTTTTTATCTACCGGTGCTCCCATATTTCCAAGCATATAACAGCCTGCATTATG GAGAGCATATTTTCACTAACAAATCCTTTCTTCTTGATGTTCTTCTGCTGCAAATTTAGTTGTTTTTTCTTTGCTATTGT TTGAGCAACAAAGAATATCTCAATCTTATTCCAGATTTGATAAGAAAAATAGCACCCTACCATCCTCTTCCTGAGACTTG TGGACATGGAGGATAGCTACCATGAAGCCAATAGTCGATCTTGCCTCCACCAACGTAGATAATCTTCACTAGCTCAGTTC TCCGGTTCATCTTTTTTAGAGATGAGCTTTACAGGCATTTCCCTTGAATCCTCTTCAATGAACCTGTGTAATTTGTGTCC ACGAACTATAGTGAATGCTTGATGATTCATAGTGATGACTGATGAAATAACTATATATGTACATTCATAATACATTGTGA CATTGATGGATAGCTAGCTATATTTTTAATGGTGAGATTTTTGCTCCGTAACAAATAAGCACCATGAATCAGAAGAAGAT AGTAAGGAGACTAAGCCCATGTCATCAGCCAGCACATTGACAGCTCAGCAGCTTCCAGCTAAGCAAGGAGTTGAGGCGGT TATAACAGAATGAGGAGAAGGCTATAGTGTGTACTGTGTAGAGTAGTATGATAGTTATAGTGTACTGTCAGTTATGTAGT ATAAAT
CDS sequence (LotjaGi1g1v0332800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAATGAGGAGAATCTTCCTGGTTTTATTTTCATGTGCAACAGGATAACAAAGCCAGAGTGCTACCGGTTTCGAGT TTTTGGGCTACCTGCGGGGAGAAAGGATGTTGTGGCGAACATCAGACGTGGGACGTTCCTTTTTCTGTTTGACACTGATG TGAAGCTTCTCTATGGCATATATAGGGCTGACTCGACCGGGAGACTAAACATTGAGCCGTTCGCTTTCGGTCGCAAATTT CCTGCTCAGGTGAAATTCAACATTTACAAAGACTGTTTCCCCTTGCCAGAGAATCATTTTAAACATGCCATTATAGACAA TTACCAGAGAGGCTCGAACAAATTTAATCCTGAACTCAGCAGTGGACAAGTAAGGAATCTACTAGAATTGTTTCGCCCAT TACATGTATTGTCAACAGCACCTCCACGTCCTGTTTTGAACGAGATATACTCTCCCTCTACATTGCCACTGCCACCAATG AATAATGTTTTTCATCAGACATCAAGGTCGTCTTTTGAGGATTCCTATTTTTCTAGGATGTCACCTAATCAAGCTCCAAG ACAGTTGAACTACAGACATGTAAATGAGCTCGCAGAGCCTACTGGTTGGGCCTATCCAGTCAACAAATTGATTCCAAATT CAGCTGCTGAACATTCTGTGATATCCCAAGCGCCAAGGAATCAGCTTCATGCAGAAGCAGTATACGCAGTTACTCCAGAG GGAACTTATGCAGCTAGGACGGCCACCAGTTATACACTATCCCATCCTCAATATACGCAGCAGGGTATCCTTAAGCCGCA ACCTGAATTTCACACTCAGTCTTTGCATGATTCTCAACACGCTCATCTTAATGTCTTACATCCACAACATGATCTTCATC CCTCCATGATGACTATGCATAGTGGTTATGTTCAATCAATGCCAGATTCTCACCATCAACATCATAATATCCTTAACCAA CCAGCTGATTATCATTCTGCAGTGGCGAATACAGGCAGCAGTCATGCCCAAACGGTTATGCATAGCGGTTATGTTCAATC AATGCCAGATCCTCACCATCAACATCATAATATCCTTAACCAACCATCTGATTATCCCTCTGCAGTGGCAAATACAGGCA GCAGTCATGCCCAAACGGTTACGCATAGCAGTTATGTTCAATCAATGCCAGATCCTCACCATCAATATCATAATATCCTT AACCAACCAGCTGATTATCATTCTTCAGTGGCAAATACAGGCAGCAGTCATGCCCAAACGGTTATGCATAGCGGTTATGT TCAATCAATGCCAGATCCTCACCATCAACATCATAATATCCTTAACCAACCAGCTGATTATCATTCTGCAGTGGCAAATA CAGGCAGCAGTCATGCCCAAACGGTTATGCATAGCGGTTATGTTCAATCAATGCCAGATCCTCACCATCAACATCAGAAT ATCCTTAACCAACCAGCTGCAGTGGTGAATACAGGAAGCAGCCATGCCCAAACGGTTTGGGATCCTCACTATAACCACCA CTATATCCTAAACCAACAACCCGACTCTTACTCCTCCATGGCTAATAGGGGCAGCAATTATGCTCAATCATTACCATATC CTCAACACACACATCAGGAAGCCCAAAAAGCCAATGTTGTGATGCAGTCGCATGCTCAGTCATCATCATACTCTCCAACT CCACACTTACCCCAAGAAGTTGTCCCCGCCACACGTTCAGATCAAGGGTCAGGAGCCATACAAGAGGTGATATCCAGTGG TCAACAAACTGGAATGGGAAGTGGGTATTATCCGTCATCTACGCAGACAGAGGCGAATGTTTCTACTCAAGAGAATGTTG TCAGCCACCTGCATTCAGCAAATACATATTCTCTGAGCTGA
Protein sequence (LotjaGi1g1v0332800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENEENLPGFIFMCNRITKPECYRFRVFGLPAGRKDVVANIRRGTFLFLFDTDVKLLYGIYRADSTGRLNIEPFAFGRKF PAQVKFNIYKDCFPLPENHFKHAIIDNYQRGSNKFNPELSSGQVRNLLELFRPLHVLSTAPPRPVLNEIYSPSTLPLPPM NNVFHQTSRSSFEDSYFSRMSPNQAPRQLNYRHVNELAEPTGWAYPVNKLIPNSAAEHSVISQAPRNQLHAEAVYAVTPE GTYAARTATSYTLSHPQYTQQGILKPQPEFHTQSLHDSQHAHLNVLHPQHDLHPSMMTMHSGYVQSMPDSHHQHHNILNQ PADYHSAVANTGSSHAQTVMHSGYVQSMPDPHHQHHNILNQPSDYPSAVANTGSSHAQTVTHSSYVQSMPDPHHQYHNIL NQPADYHSSVANTGSSHAQTVMHSGYVQSMPDPHHQHHNILNQPADYHSAVANTGSSHAQTVMHSGYVQSMPDPHHQHQN ILNQPAAVVNTGSSHAQTVWDPHYNHHYILNQQPDSYSSMANRGSNYAQSLPYPQHTHQEAQKANVVMQSHAQSSSYSPT PHLPQEVVPATRSDQGSGAIQEVISSGQQTGMGSGYYPSSTQTEANVSTQENVVSHLHSANTYSLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 380 | 378 | 1.3E-164 | – | |
| PANTHER | 3 | 380 | 378 | 1.3E-164 | – | |
| SMART | 5 | 133 | 129 | 3.4E-69 | ||
| ProSiteProfiles | 5 | 133 | 129 | 57.961 | ||
| Pfam | 9 | 131 | 123 | 3.4E-46 | ||
| PANTHER | 382 | 597 | 216 | 1.3E-164 | – | |
| PANTHER | 382 | 597 | 216 | 1.3E-164 | – | |
| MobiDBLite | 536 | 613 | 78 | - | – | |
| MobiDBLite | 536 | 562 | 27 | - | – | |
| MobiDBLite | 570 | 613 | 44 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0332800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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