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IPR013989 is a Development/cell death domain.
<p>The DCD (Development and Cell Death) domain is found in plant proteins involved in development and cell death. The DCD domain is an ~130 amino acid long stretch that contains several mostly invariable motifs. These include a FGLP and a LFL motif at the N terminus and a PAQV and a PLxE motif towards the C terminus of the domain. The DCD domain is present in proteins with different architectures. Some of these proteins contain additional recognizable motifs, like the KELCH repeats or the ParB domain [[cite:PUB00033600]]. Biological studies indicate a role of these proteins in phytohormone response, embryo development and programmed cell death by pathogens or ozone.</p> <p>The predicted secondary structure of the DCD domain is mostly composed of β strands and confined by an α-helix at the N- and at the C terminus [[cite:PUB00033600]].</p> <p>Proteins known to contain a DCD domain are listed below:</p> <ul> <li>Carrot B2 protein.</li> <li>Pea Gda-1 protein.</li> <li>Soybean N-rich protein (NRP).</li> </ul>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: B2 protein-like isoform X2 [Cicer arietinum] gi|502164886|ref|XP_004513311.1| | 6 | ||
| – | PREDICTED: B2 protein-like isoform X2 [Cicer arietinum] gi|502164886|ref|XP_004513311.1| | 6 | ||
| – | DCD (Development and Cell Death) domain protein [Arabidopsis thaliana] gi|42569577|ref|NP_180850.2| | 7 | ||
| – | Kelch-like protein [Medicago truncatula] gi|357506213|ref|XP_003623395.1| | 7 | ||
| – | PREDICTED: protein BONZAI 2-like [Fragaria vesca subsp]. vesca] gi|470125057|ref|XP_004298523.1| | 7 | ||
| – | PREDICTED: protein BONZAI 2-like [Fragaria vesca subsp]. vesca] gi|470125057|ref|XP_004298523.1| | 6 | ||
| – | DCD (Development and Cell Death) domain-like protein [Theobroma cacao] gi|508718657|gb|EOY10554.1| | 7 | ||
| – | Uncharacterized protein TCM_029398 [Theobroma cacao] gi|508780312|gb|EOY27568.1| | 7 | ||
| – | DCD (Development and Cell Death) domain protein [Arabidopsis thaliana] gi|42569577|ref|NP_180850.2| | 6 | ||
| – | PREDICTED: B2 protein-like [Cicer arietinum] gi|502138967|ref|XP_004503595.1| | 7 | ||
| – | PREDICTED: B2 protein-like [Cicer arietinum] gi|502138967|ref|XP_004503595.1| | 7 | ||
| – | PREDICTED: B2 protein-like [Cicer arietinum] gi|502134303|ref|XP_004502070.1| | 7 | ||
| – | DCD (Development and cell death) domain protein; TAIR: AT5G61910.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|A0A1J7GCP4|A0A1J7GCP4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0332800 | 7 | ||
| – | Kelch-like protein; TAIR: AT5G01660.1 influenza virus NS1A-binding protein; Swiss-Prot: sp|Q6TDP4|KLH17_HUMAN Kelch-like protein 17; TrEMBL-Plants: tr|K7MTP9|K7MTP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0447400 | 16 | ||
| – | DCD (Development and cell death) domain protein; TAIR: AT3G27090.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|I3SHH8|I3SHH8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0624500 | 6 | ||
| – | DCD (Development and cell death) domain protein; TAIR: AT2G32910.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|K7KJN7|K7KJN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0105600 | 7 | ||
| – | DCD (Development and cell death) domain protein; TAIR: AT2G32910.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|A0A072UUG0|A0A072UUG0_MEDTR DCD (Development and cell death) domain protein; Found in the gene: LotjaGi3g1v0105700 | 7 | ||
| – | DCD (Development and cell death) domain protein; TAIR: AT2G35140.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|A0A1J7HZ67|A0A1J7HZ67_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0135600 | 7 | ||
| – | DCD (Development and cell death) domain protein; TAIR: AT2G35140.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|A0A0B2PKD3|A0A0B2PKD3_GLYSO B2 protein; Found in the gene: LotjaGi4g1v0083700 | 7 | ||
| – | DCD (Development and cell death) domain protein; TAIR: AT2G35140.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|A0A0B2PKD3|A0A0B2PKD3_GLYSO B2 protein; Found in the gene: LotjaGi4g1v0083700 | 7 | ||
| – | DCD (Development and cell death) domain protein; TAIR: AT2G35140.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|A0A0B2PKD3|A0A0B2PKD3_GLYSO B2 protein; Found in the gene: LotjaGi4g1v0083700 | 7 | ||
| – | DCD (Development and cell death) domain protein; TAIR: AT5G42050.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|V7CTG8|V7CTG8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0437000 | 7 | ||
| – | DCD (Development and cell death) domain protein; TAIR: AT5G42050.1 DCD (Development and Cell Death) domain protein; Swiss-Prot: sp|P37707|B2_DAUCA B2 protein; TrEMBL-Plants: tr|I3S9T3|I3S9T3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0035000 | 7 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 4.35 |