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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0333800 |
| Transcript ID | LotjaGi1g1v0333800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor Inducer of CBF expression 1; TAIR: AT3G26744.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1; TrEMBL-Plants: tr|A0A0B2RHL5|A0A0B2RHL5_GLYSO Transcription factor ICE1; Found in the gene: LotjaGi1g1v0333800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:79233849..79238519) extracted from Lotus japonicus Gifu genome v1.2.
ACGTAACGACATTTGTAACCACCATCATTACGGTATTTCGAAACCCTCATTTTAAGACCCTCCTCCTAATGCCCTACCTA GTTGTAACGGGAGAAAAGTGAAGCTTTCTTCCACGTGTAGAAACAACAACAACACAAAGCACCAACACAAAAATTCACCA AAGGGTGTTTCCATGTGATGCTCATCCTACTCACCATGCTTTGCAGCACTATATATGGACAAGCGTATATATAACGTTCG AACCCCTACTATGCCTGTCTCCAAAATCACAATCTCAACAAAACTCCCCAAAAAACAAAACACAAACATGAATAAATAAA AAGCAAATGCCCTTTTCCTTCTGCAACATCCTTTTCCCCTTCCTTTCTGCTCCTTTCCTTTAACTTCCCTCTCCTTCATG TTCTTCTCTTTCTGTCCCCAAAAGAAACCCCATTAGCCAAAGACTCAAAACTTTTTGTCAGAACAGAATCACATTCAAAA AAAGCTATGTTGTCCAGAATAAACAACGGTTCCTGGATGGATGAAAGAGAGGATGAAAACTCTGCTTCTGCTTCTTGGGC CAGAAACTCCAAGCCAAACTCCACTGGTTTTGTTGAAAACAGAGATGATTTGGGTTCTCTCTGTGCTTTGAAACCCATGC TTGAAGTGGATGAGGAATGGTTCATGATGAGGGACATGGCTTTTGACAACGTTTTGCTCCAAACCGTGGACTCTCACTCT GCATCTTCATGTTCTCCATCTTCCTCTGTTTTCAACACACTTGAACCTTCATCATCGCAGTATTTTCTGCCTCCGAATCC CAAACCACCCACTTTATCTTCTCTTCTCAACCCTTTTGACATGGGGTTTCTTGATCCTCAAGGTTCCACCACTTCTTCTC TTCTGGGTAGCTTCGTTGAGCTGAACAACTCAAAACCCCAGTTAACACTTCCTAACTTCACCTCAGGCACTACCATGACC ATGCCCCATTTGCCACAAAGCAACACTTCCTTTGGAGGATTTCAGAACTTGGAAGAAGCTTCTGGAAAGACTCCATTTCT GAACAGGTCCAAGATTTTGAGACCGCTTGAATCTTTGCCTCCTTCTGGGGCACAACCTACTCTGTTTCAGAAGAGAGCTG CGCTTAGAAAAAACATGGGTTCGGGTTCTTCTCCTGTTCAGAGTAAGGGTGAAATTGGTGAAGGGAGTGATAAGAAAAGG AAGCTGAGTATTGGAGATGAGTACGAAGATGCGAGCTTTGATGGGTCTGGGTTGAACTATGATTCTGATGACTTGATTGA GAGTAAGATGGAAGAGAATAGTGCTAAGAATGGTGGAGCCTCTAATGGCAACAATAGCACTGTCACTGGCGGCGGTGTGG ATCAGAAAGGGAAGAAGAAGGGATTGCCTGCTAAGAATTTGATGGCGGAACGCCGCCGTAGGAAGAAGCTCAATGATAGG CTCTACATGCTGAGGTCCGTTGTTCCAAAGATTAGCAAAGTAAGAGTGCTTTTCATCAATCTCTTAAAGTTCAAATCTTA TGTTTTGCCATTACTTTTTAGAATTGTGTTTAGAGAATTTTGTCTTTCTTAGTTGATAGATTATGAATATTAATGTGATC TATGACTATGTTAATCAATGTTAAGATGAAGATATATAAGCATGTTCGGGTCAACTTCTCTTTCATTTAGAATCAATTTT GAGAGGCAGAAACTACTTGCGTGAATTGACTTTAGCTTCAGAATCAATTGTGAATCAATGTTAAGATGAAGACATATAAC ATGTTCGGATTAACTTCTCTTTTTCTTATATCAATCCAGAGAGCCAAAAGCTACTTTCGTGACCATCTCCCCGGAATTGA TTTTAGCTACATAATTAATTGCTGCAGAAGAATTTTAAAAAATTTAGTGTGATTTGTGGTGGATCTCTAGATTGTATGAC ATGGTTTTGTTTGGTTTGGTAGATGGACAGGGCATCAATCCTTGGGGATGCAATTGAGTATCTGAAGGAACTGCTGCAAA GGATCAATGATCTTCACAATGAGCTGGAGTCCACACCTAATTCTGGGTCTTGTTCACTCACACCTGTTTCAAGCTTCCAT CCTTTGACACCTACTCCAACAGCACTTCCTGGCCGTATTAAAGAAGAACTGTGCCCCAGCTCATTGCCAAGCCCCAATGG CCAACCTGCCAGGGTAATGTTGTTAATGTTGTTATGTCCTTTTTGTCTTTTTGCTCAGATCTTGATCTTAAATAGACATT GCTTCCTTGCTTCCTATTCCTGTTAACTAGAAATATTGTCAAGATGCACAACTTTTATGCTTGCTTTCTTGCTGATTTGA ATTTGTGCTTGTTTTGGGGTGTGAAAATGAAGGAACCGTATAATCATATTTTGCCAAGTTTATGCTCCTCAATCTTGGTT TAACTCTCTAGGTTTCACTTAGAATGATCATTTGTACTCATTTGATTTCTCATTCATATCTCACTAATGAAATATGCCAT CACTGTATGAGTATGACAACAGTAGAGTTATTTGGTTTTCCAACTATTGGCACATTTAATTACATTTTGTTTTTGGAATG ACAAATTGCATATTTTTTTTGGATTTCCGTTGAATTTAATGTATATTCACATTGAACTTTACTGCAGTAAAATTATGTTT CTCTGATTCACGTTCAACTCAACGTTTCAAATTTTAATTTATCCATTTATGATAATACTTTGGCATACGTGAAACCACAT TAGCGTATTCAAAAATGCTAACTCATACATACATTCACCTAATTCCAATGTGCTTTATGAGAATAGAGGTGGAGATTGGA TTCAGTAAACGTGTTTTCATTTTTTACATGTGTGATTTTTAAATGATATGTCATAATTTAATTGTTGAAACGTACCGAGA TTGATGTATGTTTTTAAATTGAGTTTTGGAGGGGGAAAGAGAAGGGAAAGGCTTATGGGAAGCCCACTTCTTGTTCAAAT GGGAGAGGCTTTGAGATATTTCTAATAACCCTTAAGGCCTCTCAAAACCTTCTCCTAGTTATATTTTTTAATTCCCCCAA ATTTGGGGTTTTTGACTCCCAAGCAAAAGAAAGGCTTGCCCTCTTAACCCCTCTCTTGCCTTCATCTACCCTTCTCCTCA AAGTCTTTCCCTACCCTTTCCTTAAAACTCACAAACACCCTAAATATGAACAAAGGATTTGAGTACCTCATAGACATGGT CGAGAGTTTTGTTGTTATTAATTAGAATGATCTAATGGGAATTTTTATTATTATTTTTACCCTGTATAGGTTGAGGTTCG GTTGCGTGAAGGAAGAGCTGTGAATATCCACATGTTTTGTGCCCGCAAACCCGGTTTGTTGCTCTCAACCATGAGGGCTT TGGATAATCTTGGTTTGGACATTCAGCAAGCTGTTATCAGCTGTTTCAATGGATTTGCTATGGATGTTTTTCGAGCTGAG GTAAAAAAAATTATTCTGTTATCAACATCTACAATTCTACACCACTTGGAAATCAAACATGTTGCATCCATACTACAAAG CTTAATTGATATTTTTCCTAGTTCACTCACCTGTTGCAAATTATAACATTATGATATTTTAATAATGATATCCTTATCCA TCAATGGCTTAAGTGTTGAAATGCTATTTCGAAATCAAATATGCTCTATAGCTGTTTTTATGATCACAAGTCATAACTAT TGTTGAAGTAAATAAGAAAAAAAAAAAATTCATGCCCTCCTGCAAAGTGGAGGATGGTATACAAATATAAAGGAGTGGTA CCAATAAGTGATTGATTAGTATTAAAATTTAGATTAGATCTAAATCCACATCAAAAGCTAGTTTAAAGGTGAGAATTATT TTACCTTTATAAAGACTTTTTTGAGAATATCTCTTATCAATGTGAGGCTTCTCAGTTCAAGGTTAAGACATATGGAGCAT GAGATTTATAAGCACATTTGCGGCTGACCCATATATATGGGTCTCCAACAAATGAATTATAATAAGTTCTGATACCATAT TAGAATTCGGGTTGGAGCCTAAAAATTAATTTAGGAGTGAGGGTTGTTCTACTTTTTATCATGACTATTTTAGCTATATA TTTAGTCAATGTGAGATTTATCAACGACTAGTGTAACAAATGTTATGCGACTAATATAAAAAAAAAATTAGTATTTTAGT GATTAAGAAGTAGAGGATAGCATAATTGCATAACCCTCTTACTAATACATTATTAAATAGTAGATGCATTTAATACTTTG AAAGCTTAAAAACATTCAGTTCTTTCTTCATTTAGTAATAAGAAGTTTAGAATTATTTATTAAAAAATCATTATCACCGT TAAAGTGAAGCTTGATTTTAAGTTTATTTCTATAATTCAAATACTAACATTGGCTCTATTTCAGCAATGCAACGAAGGTC AGGAAGTCCATCCGGAGCACATCAAAGCAATACTATTGGAGTCAGCTGGCTTCCATGGCTTGATCTAATTAGTTTTAGCA AGGAACAAACTAGTACCTGCCATTTCAAACAGTTAATTTAGAAAGTTTAATCAAGTTTTTACATTTTAATTCATTTCCAA ATTCAAGTGTACGGTACTGGCTTCTGGTAATTACTTGACTTTTAAGTTGAATTAGAAGATATTTTCATATGATATTAACC TCTCTAACATCAATTACACAATGTTTGGCAC
CDS sequence (LotjaGi1g1v0333800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGTCCAGAATAAACAACGGTTCCTGGATGGATGAAAGAGAGGATGAAAACTCTGCTTCTGCTTCTTGGGCCAGAAA CTCCAAGCCAAACTCCACTGGTTTTGTTGAAAACAGAGATGATTTGGGTTCTCTCTGTGCTTTGAAACCCATGCTTGAAG TGGATGAGGAATGGTTCATGATGAGGGACATGGCTTTTGACAACGTTTTGCTCCAAACCGTGGACTCTCACTCTGCATCT TCATGTTCTCCATCTTCCTCTGTTTTCAACACACTTGAACCTTCATCATCGCAGTATTTTCTGCCTCCGAATCCCAAACC ACCCACTTTATCTTCTCTTCTCAACCCTTTTGACATGGGGTTTCTTGATCCTCAAGGTTCCACCACTTCTTCTCTTCTGG GTAGCTTCGTTGAGCTGAACAACTCAAAACCCCAGTTAACACTTCCTAACTTCACCTCAGGCACTACCATGACCATGCCC CATTTGCCACAAAGCAACACTTCCTTTGGAGGATTTCAGAACTTGGAAGAAGCTTCTGGAAAGACTCCATTTCTGAACAG GTCCAAGATTTTGAGACCGCTTGAATCTTTGCCTCCTTCTGGGGCACAACCTACTCTGTTTCAGAAGAGAGCTGCGCTTA GAAAAAACATGGGTTCGGGTTCTTCTCCTGTTCAGAGTAAGGGTGAAATTGGTGAAGGGAGTGATAAGAAAAGGAAGCTG AGTATTGGAGATGAGTACGAAGATGCGAGCTTTGATGGGTCTGGGTTGAACTATGATTCTGATGACTTGATTGAGAGTAA GATGGAAGAGAATAGTGCTAAGAATGGTGGAGCCTCTAATGGCAACAATAGCACTGTCACTGGCGGCGGTGTGGATCAGA AAGGGAAGAAGAAGGGATTGCCTGCTAAGAATTTGATGGCGGAACGCCGCCGTAGGAAGAAGCTCAATGATAGGCTCTAC ATGCTGAGGTCCGTTGTTCCAAAGATTAGCAAAATGGACAGGGCATCAATCCTTGGGGATGCAATTGAGTATCTGAAGGA ACTGCTGCAAAGGATCAATGATCTTCACAATGAGCTGGAGTCCACACCTAATTCTGGGTCTTGTTCACTCACACCTGTTT CAAGCTTCCATCCTTTGACACCTACTCCAACAGCACTTCCTGGCCGTATTAAAGAAGAACTGTGCCCCAGCTCATTGCCA AGCCCCAATGGCCAACCTGCCAGGGTTGAGGTTCGGTTGCGTGAAGGAAGAGCTGTGAATATCCACATGTTTTGTGCCCG CAAACCCGGTTTGTTGCTCTCAACCATGAGGGCTTTGGATAATCTTGGTTTGGACATTCAGCAAGCTGTTATCAGCTGTT TCAATGGATTTGCTATGGATGTTTTTCGAGCTGAGCAATGCAACGAAGGTCAGGAAGTCCATCCGGAGCACATCAAAGCA ATACTATTGGAGTCAGCTGGCTTCCATGGCTTGATCTAA
Protein sequence (LotjaGi1g1v0333800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSRINNGSWMDEREDENSASASWARNSKPNSTGFVENRDDLGSLCALKPMLEVDEEWFMMRDMAFDNVLLQTVDSHSAS SCSPSSSVFNTLEPSSSQYFLPPNPKPPTLSSLLNPFDMGFLDPQGSTTSSLLGSFVELNNSKPQLTLPNFTSGTTMTMP HLPQSNTSFGGFQNLEEASGKTPFLNRSKILRPLESLPPSGAQPTLFQKRAALRKNMGSGSSPVQSKGEIGEGSDKKRKL SIGDEYEDASFDGSGLNYDSDDLIESKMEENSAKNGGASNGNNSTVTGGGVDQKGKKKGLPAKNLMAERRRRKKLNDRLY MLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLP SPNGQPARVEVRLREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDVFRAEQCNEGQEVHPEHIKA ILLESAGFHGLI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 36 | 36 | - | – | |
| MobiDBLite | 21 | 36 | 16 | - | – | |
| PANTHER | 95 | 492 | 398 | 3.7E-178 | – | |
| PANTHER | 95 | 492 | 398 | 3.7E-178 | – | |
| MobiDBLite | 215 | 239 | 25 | - | – | |
| MobiDBLite | 270 | 298 | 29 | - | – | |
| MobiDBLite | 272 | 290 | 19 | - | – | |
| Gene3D | 293 | 364 | 72 | 2.0E-14 | ||
| ProSiteProfiles | 299 | 348 | 50 | 15.58 | ||
| SUPERFAMILY | 302 | 371 | 70 | 1.28E-16 | ||
| SMART | 305 | 354 | 50 | 6.2E-14 | ||
| CDD | 306 | 352 | 47 | 3.5607E-13 | ||
| Pfam | 306 | 348 | 43 | 1.7E-9 | ||
| Coils | 338 | 362 | 25 | - | – | |
| CDD | 421 | 481 | 61 | 4.44248E-8 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi1g1v0333800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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