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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0337400 |
| Transcript ID | LotjaGi1g1v0337400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box family protein; TAIR: AT5G63520.1 F-box/LRR protein; Swiss-Prot: sp|Q9FMV0|FBL91_ARATH F-box/LRR-repeat protein At5g63520; TrEMBL-Plants: tr|A0A151TR18|A0A151TR18_CAJCA F-box/LRR-repeat protein family; Found in the gene: LotjaGi1g1v0337400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:79771491..79779245) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAACATCTGAGTTGAATACTTGCGGTATTGGGCCAAAGCAAAAATGATGCTAGCCCAGTGTTTTACCGCTTTCTTTC CTAGGCACCGTGTCGGGGGTTGTGTCTGCCTGAACCTGAAGCACTGAACTCTGATGATGTTTTCTCATGTCTGAAGTTTC AAGTTTGAACCAAAATGGAGGAGAATCCATCGCCATCATCAACACTCAACAGCTTCGAACATGGGCGTGAGTTTGCTGAA CGAGGACCTTCTTCACAACATTCTAACCAGGCTTCCTGCCCTATCGTTCGCTTCAGCAACTTGCGTTAGCAAAACGTGGA ACTCTGTCTCCAATCGCATCCTTTCTCGTCCCAAGCTCTCCTCTGCGCTTTCTCTCAACCCTTCACCCAACGTAAGCAGC TTCATGCTTCTCATTCTTCAATTTCTGTGTGTCTTTGTGTTCAGTATCTGATTAATAGATCATGCAAATTGTCAGTTAGT TAGTTAGTTAGTTAGTTAGTTTGTTTGTTTGTTAATCTTCAGTTAACGATGTGCAGGATGCAGTGAATGAGGTTCTTCAC AAGATTCTGTCCGAGCCCATCCGACCTCATTTTGCTATTGTCAATCTTGCAGTTGGATTCGGAGCGTCCAAGATTCTGTG GCTTGTAAGTTGTAAGGAATTGACACTCTTTTTTTAGTGCAAGCAGTATTTGTATTATCATATGCAATTGACTTAATGCC TGTGGTGCAGGTTACAAAGACATTGGGTTCCGATATTCCAGTTATTGTCTCCGTGACAAATGGTATTATGGGAAGGGATG CTCTTACGGGTGAATTTAAAGAGGTTGAATGTTGATATTTGTTTCCTTTTGAGCTGGAGATTTGCTAGACTCATGTAGAT AATTTGTGCAGGTCAAGTGGGATGCCGATGCGCTTATAAGTGCCATTGTAGATGAGGGCATAGTGTTGACTGTTGGCTAC TTGCCAGGATTAAAAGTTGAAGCTATACCATTGCAAAGACCAGCCAAGGTAGTAAAATCTATTCAAGAATTTGGATTTTG TACTCTCAGAATATGAATGTGTGTAAGTCACATTGAAAATAAATACAGAATGTACAACCCAAGGTAGTTTCATGCAAAAG GTGCCGTTAAGCAGCCAGGGGGTTTTTATGATACCTCGTGGCAAGGGCAGCTTACTGAAGAAAGGTGTTAAGTATAGATG AAAGATGAAAAAACACAGAATATGTGGACATTTTGCATTAGTTTTACATATAAATTAACATCTCAATTTACAAAACAGAA TAGTCGAAAGACTGGTATTAATTATTTAACTTTATGGATATTTTACCCTCAGTATTTTGGGAATTCTTTAAATGTAAATA AGATACTAAAGCCATGCCTAGTAAGAACCAGAATGGTCTAAGACATCAGAGATTTGTGCTTCAACTAGCCAGAGTTAGCA AAATCTTTGGTTTTCTTGTAGGACTAGCTTCTCATAGTGATTTCTGACCCTTTTCACACAAAAGGTCACTTGTTCGGATA AAGTGATATTGTCGGGTAGTATCATGAAATCGGTGGAATTACCAATCTTCACTAGTGCAACCTGTGACTCTGACAGGTTG AGCTGGGCGAACCTGGGAACCATGCAACTCACACCTGTGTTTTTTATTTCCTTTGGTTTGATGTCACATTGAGTTCGACT TCTTTGGTTTTGATAGCTGTGGAAGGGGGGAGGTGTGATGACGATGCAGTTTCTTGTGCAGTCAGGGGAGAGGGTCACAA GAAGGTGTGTGTTCTGGTGTGGGACATTGGGTGGACCCTATAATGCTGTTATTGGGGTTTGATGGGCTTTCCATTGGTTC TGAATATCGTTTTCATGGTATTTTCATATGGAAAATGATTTATCCTCCTACTAATCCTCCTACAAATCCTCCTACACACT AAATGAAGCAAGAAGTTATTGCCTTTGGTATCTTGGAAATGTAAAAAACACTTAATTCTTTCTCCATTTAGTGTGTAGGA GGATGAAGTAGGAGGATATATCAATGCTCCATTTTTGTATATTCTGGTTGCAAGGGCAGTGTTGACATGTACTTTCTGGT TAGAAGTCTAAAAATTTGAGTGCTAGAAAATTGGTCTGCATGTGAACGAAGATTAATGTATTATAAGGATGTAGTAAATG AATGGAAGTGTAACCATGCTTTATGCTTTTATATTTATAATTATCTGTGGCAGCAGACACCTCAAGAACCATGGATTGAC AATTTTGTGATGGATATCAAGGAATATTCTGCCTCTGTCTCCAGTTGCCAATTCCCTGTTGGGATTATGCTGTTCGGAGT AAGTTAATGGTTGTGCACTTATTTACAAATAAATCACTATTTTTAGCATTCTTGGTTCTGTTTTTAACACTTTGATTTGG CTTCGCAGGAAGCAACCTCTGACATGGAACTGCTTCTGAAGAAATTGGGTGAGTGATGCTTGTATACATATATTTTGCTA CCAATTGTTATTGTCTTTCCTAATTCTGATTTTTCTTCATATTCTCATTTACTCTTTACTTTTCATGGTAAAAAGTATTA GGAAATTTGGTGTTTTGCATGGTAGAATGAGGTTTATGCTTCATTTTTGGTGTGTGATAAAAGGGTGTTTCTTAGAGCTC ATACATGTGATCCTATATTTTATCGAAAGATATTTGTTACAAAATTTCTATGGGATACATAGTGGTAATTTGATACTCGA ATTTAGATGAGGTGACTTTGTATTGTGTTAGTTCTGTAATTGAGAACATGACTTCAATTTACACCTTCCTGCTACTGGCC TGTGCTTGGTTTCTTTTTATTTTAATGATGTCTTGTTTTATATCAGACTATGCCATGCCGATGGACACATTCATTGTGGG TAATGAGCGAGGCTCCGTTGTATACAGAAGTGGAAATGATTATAGGAGCATCTGTGATAATACAAAGGACATAGAAGCTG TTGCTCTTGTATTTGCTCAAGACAAAGACAGGTCTTCTGGTACTTCTCATTCTTGATATCTTTTTGGTAGCTCTTGCTAC CTGATGGACAATAGAATTCATGAAACTGTTACAGTGCATGCAATCCCATTTCATTAATGGAGAATGTAATTTTTCATATT TCTCAAAGGATGTTAGGTTTGAAAACTTCTGTAATTTTAGTCGTTAGAAACTTAGAATATGTATTTTATGCTAGAGAAAT TTGGGTAGCTAATCAAACAAGTATTAAGAACAAATAAGTGGGAATTTTTTTCAGGTTTGATTAGGATGTCTGGAAATATC AATCGCTTTGCCTTTTCAAATGAGGACAGAGGTTGATAATGCAAGTATTTTCATTCCTTGTCTTCTTTAAGCACTACTAT TTGATTTTGTTATTGCTCCTTTTTTTGGGGCAAGTTAGGAAATTCCTGTTGGGATCTAAGTGGGTGATTGAGGGAAATGA GTTTTTCTTTGGGGGGGAGGGTAATTAAACACCCTCCTCCTAAAATCTAAAGGACTGTTTTACAACTCTGTCAGCTATTT CTTTGTAACACTTCCTACTCTTCTTCTGCCTTTATGTGTGCACATGTTGAATAATGGAGTCTATCTTGTATGTGATTTTT TACTGCCACAATTGTTTTTAGAGTTGCAAGGCGTGCTTATAAGTATCATCTTATTTTAGTTTAGTTTTTGCAATTCTCTA CAAGTTGCTGATCTTTGTTACGGATTGATTTTGCTGCAGGAAGTATTAGATTTCATATTGCATTCTCAAACGGTGTTTCA ACTGTGGGTGCTAGATACAAGGCAGATTCAGTTCAAACAAACTTCGATGTATGTTCTACAAGGCTAATGGCTAGGCGGGA AGGGCAGCAGGAACTTCTTGATGGTCAGAGTATTCTACTTGAGCTTAAAAATTCGGTGCGTGAATATTTGCATTTTTTTG GACAAAACTATAAATTCATTTCATTAAGGGAAAATTGATTTTTAAGATTATTAAGAAGGAATATTTAATCTTAAGAGATA TAAAACATGTAAATTTAGTGAGAAGGACCATTAGATTCACCTAAAAGACAAAAAAAAACCCTTGTGAAGAAGTTACTGAG TTATAATTTCAATTTCTTAAGAACTTGTTGCAACCGAGAGCCAAACGAGGAAACTTGCTTTGACCATCATAATTGTTTTC AATTGAATTCTGGTACACAAGTAAAGGCAAATTTCTTAGAAATCAGTAAGGAGATTCATTTTCTCCCATTCTCAAGATAT TTTCAATAGTTGTCATAAATCCAAATTCCAGAAACTATTTAAAAAACATAGCCTTACACATCAAAGCAAAAAGAGAGGAA AATAACCAATTAAAAAAATATCTCAAGTACTGCTCCAATGTCTAAATAGAGCAATTTCCCCTTTTTTAGACTTGACAAAA CCCCTTTGATAGTTCACAGCACTTGATAAAGGGGTGAAAAACCAGTGCAGAATTGACAAAACAAACTACAAAAGACTCAA TGTGAAGATAGAGGGATGTTTGATTGATGAATTGCGCATTTGCTGTTTATACCTCAATCGAAGATGATAACTTTCAAACA GGGAAAAAGAGAAGCCATTAGTTATTTAGAGCATAAGAAAAAACATTCTCGTAGGCAACCAAGGTTGCGGTACCCCACCG AGCAGCACCGCGTTGTCGACAGTTCGATGGCCTTCTTCCCTCTCACTGTCGCAAGCACTCGCTATTTCTACAAACCCAGA TTATGGCTATGGAAACTATGGGTTGCACGATTAGAGACCTTGGAGATGCACCATGAAGAGAACGTGGTTGAGAGATAGTT TTTAAAACACAACCAAAATAAAGAAACCACTTTTTGTGGTTTTGAAAAACCGAGTAAAACTGTTTTGAAAGTTTTAAAAA ACCGATTGAAAACCATTTTAGCCGACGTGTTTCGTTTTAAAAATGACATTTAAAAACCAAAAACCACAAACTTACAAGTT GCAACCACCCCGAACGGGGCCTACTTGAGTGTTGCAAGGTTGTCAAAATCGAGATCCTTCTTTAAGATCAAGATAGGGGG GGGGTAAAGGATCATAAAACATGTGATCGTATGAATAGTACTATCCTGCCAAAACTTAAGTCTCTTTTAATATAAATATG GTCATATAAATTAGCTAATATATGTAATAATAACACTAAAATTCAAGAATTCAGATATTTATTTTGTAGCTATTATATTG TTCATAGCTAAATGTCTATTTCATGATATTTATCTGGCTGGTTTTCTTCTATCTCATTAGCAGTGTTATTAAACTTGAAC CGATTATCGACTCGGTCAGGGTACCGGGTTGATGGGTTACAGGTCGAACCAGTGAGTCTAGTTGAACCCGTTGACTCGGT ATCTATTAAAAAATATAACAAACTAACACTAATTAGCAATTCACATTCTAAATTTAAAATTATTACCATCATATGAGTAT CTAATTAAACTAAAAATAATTTGCTGCAATAAAATCTTACAATTTATTATGGTCATATCACTACCTAAAGTAATGTAAAA AAAATTTATTCAAATCAGGAAGGATTTCTTTGTCCACTAGTTTAGCAAAAGGGAAAAGAACATGGCAACCTCGTGATGGC TGTAAAACGATAACCCAGGAACAGGCACAGTGAGGACGGCCCCTAACTCGAGGGCACAACTTTGTTGCAGCTTTGTTGCG AATCTGTGAGAGGAGAATGCAATGTCGTTTTTTTATGTTTTACAACTCGCCGGTTCATTAAAAAACCGACCGAGTCACTG GTTTTGATGTAAACCGGCCGAGTCATACCGGTTCTCACCGGTTCAGTTGCACAGCTGATCTGATCCTCGACTTGATTTAT AGTCTGACTGGTTCAACCGGCCGGTCCAAGCCGAGTTTAATAACACTGCTCATTAGCATATTTTTCTTTTAGCAACAACA ATCTATATCCATATTGGGTATTTATATTTGTTATTTTGTGAAGAAGATGATTGTAATATAGACTTCTGCTATATGTAGTT TTCTTTGATTTTAAGGTTTCACATCAATTCGATGTTTTGCAAAACTAATTCAATAAAATTTGTGCTTGTGGTTTTTATAT TTCTTCTTCTTTTGTTTTTATCTATTTTTTTCCCCTTAGCTTCCGAAATTGCAGCAGATGGAGAATCACATCCAGAGACC AGAGTTCCTCATTCGGGTAATTAAACATAGGAAGTTCTCCATTGGAGCAGAGAAGCCAATGCCAAGAAAGTCTATTGCAT ATCATGGAGTTTTAGGGTATGATATAGACTATTCCCTTTGAAGATTGTAGGTCTTTTAGTACCTCATTAATATTAATTCT TCTCTGGATTCCTCTCGTGAATTTTTCCATTTTTGTTCTGCATCAACCAGATAGTGTGTTATAGCTTTTAATCCCGTTTG GCGCCCTGACCTCGATTGGGGATAGGAACAGGGACAACCCCCCCCCAGAAAAATTTGGGGACCGGGATGGGGTTCATTGT CCCAGCCCCATAAAATACTATAATACCCTTACAAATATTGGATGACTTATAATGAAGACTTTCATTTGGATGAGTTGGAT GGTCGAGGGAATGTTTTGAGTGTTTGGTGAATGTACAATTTTATTCTTACTCTGAAGTCTAATTCTGTAAAATAGAAAAA TGCACACATGCATGATCTTCTAGTTTTTTTTTCTGACATGGATCCTGAAATGAAATACAAACATGCACAAGAGTTTAACA ATAGTTGAAATTATTAATTAATTTTATGATAGATGGTAATTTTTTTAATTTAATGATTCTTTTAAAATTACTTTCTGATA ACCAAAAAGAAAAGATGCTTTTCTGACATTTGCAATGAAATTGAAATTGGCTAGACTTCGTGATAACCATTTGAAGTGAT ATACTTGTTTCTATTCCGTTAGATATGCCCATTATATAATCAACTTCTGTTCTTTCTCTTAAATTTAATGGTCTGCTCCC CAGTCTATTGTAAACAAACAGTCATGAAAGAAAAGACTAAAAGTTGTTCATGTTTTGGACAGAGTTGATGAAGAGTATCT ATATGTTGATGGAATTGGCATAAAAAAAGGAGATATCTTTCAGTTCTACCATTCAGATCCTAATGCAGCGTTAGTGTCAT TAACGGTGGTCCATGATGTGCTCAACAATATTAAGATGGGAAAAAATTCCAGGAGGTTCATGGGTGATGGAGACAACAGC ATTAATGTTTTCGGCGGTTTTATTTTTGCTTGCTATGGCCGTGGTGAATCATTCTTTGGACGTCATGATGTGGATAGCTC CCCATTCTTGGAGAATTTCCCAGGAGTGCCATTGGGTGGCATATTTTGTTGTGGTGAAATAGTTCGTCCTTGTACCCCTT TGATTGGCCAGCATCAAGGAGCAGGCCCCATTAGTTTCTGTTTGCATACTTATGGCACTGTCTATTTAGTGATGTCATAT GCTCCTCCCTCTGTGGAACAATAGATGCTGCTCATGTTTTGTTCTCGTGATGTACATTGCTAGTTTATGGAGGATGCTCT ATCCTATGGTGTATCAGATAATACCATTTTGTTACATGGAGATGGAGTTTACTTGTTTTACTATCACAAAATCACTATGA AACTGACTTCCAAGTCTTTTGTAATCTTTTCACGGGTTTGTGTGGTGGTTAGAATAAATAATATAAAAAAGTTGATAAAT ATAATTTAGATTGCCATTGGATCACAACTGCACCATTCTGCTGTTATTTCATTACAGTGTAGGAAAATTTTCCCA
CDS sequence (LotjaGi1g1v0337400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCGTGAGTTTGCTGAACGAGGACCTTCTTCACAACATTCTAACCAGGCTTCCTGCCCTATCGTTCGCTTCAGCAAC TTGCGTTAGCAAAACGTGGAACTCTGTCTCCAATCGCATCCTTTCTCGTCCCAAGCTCTCCTCTGCGCTTTCTCTCAACC CTTCACCCAACGATGCAGTGAATGAGGTTCTTCACAAGATTCTGTCCGAGCCCATCCGACCTCATTTTGCTATTGTCAAT CTTGCAGTTGGATTCGGAGCGTCCAAGATTCTGTGGCTTGTTACAAAGACATTGGGTTCCGATATTCCAGTTATTGTCTC CGTGACAAATGGTATTATGGGAAGGGATGCTCTTACGGGTGAATTTAAAGAGGTCAAGTGGGATGCCGATGCGCTTATAA GTGCCATTGTAGATGAGGGCATAGTGTTGACTGTTGGCTACTTGCCAGGATTAAAAGTTGAAGCTATACCATTGCAAAGA CCAGCCAAGACACCTCAAGAACCATGGATTGACAATTTTGTGATGGATATCAAGGAATATTCTGCCTCTGTCTCCAGTTG CCAATTCCCTGTTGGGATTATGCTGTTCGGAGAAGCAACCTCTGACATGGAACTGCTTCTGAAGAAATTGGACTATGCCA TGCCGATGGACACATTCATTGTGGGTAATGAGCGAGGCTCCGTTGTATACAGAAGTGGAAATGATTATAGGAGCATCTGT GATAATACAAAGGACATAGAAGCTGTTGCTCTTGTATTTGCTCAAGACAAAGACAGGTCTTCTGGAAGTATTAGATTTCA TATTGCATTCTCAAACGGTGTTTCAACTGTGGGTGCTAGATACAAGGCAGATTCAGTTCAAACAAACTTCGATGTATGTT CTACAAGGCTAATGGCTAGGCGGGAAGGGCAGCAGGAACTTCTTGATGGTCAGAGTATTCTACTTGAGCTTAAAAATTCG CTTCCGAAATTGCAGCAGATGGAGAATCACATCCAGAGACCAGAGTTCCTCATTCGGGTAATTAAACATAGGAAGTTCTC CATTGGAGCAGAGAAGCCAATGCCAAGAAAGTCTATTGCATATCATGGAGTTTTAGGAGTTGATGAAGAGTATCTATATG TTGATGGAATTGGCATAAAAAAAGGAGATATCTTTCAGTTCTACCATTCAGATCCTAATGCAGCGTTAGTGTCATTAACG GTGGTCCATGATGTGCTCAACAATATTAAGATGGGAAAAAATTCCAGGAGGTTCATGGGTGATGGAGACAACAGCATTAA TGTTTTCGGCGGTTTTATTTTTGCTTGCTATGGCCGTGGTGAATCATTCTTTGGACGTCATGATGTGGATAGCTCCCCAT TCTTGGAGAATTTCCCAGGAGTGCCATTGGGTGGCATATTTTGTTGTGGTGAAATAGTTCGTCCTTGTACCCCTTTGATT GGCCAGCATCAAGGAGCAGGCCCCATTAGTTTCTGTTTGCATACTTATGGCACTGTCTATTTAGTGATGTCATATGCTCC TCCCTCTGTGGAACAATAG
Protein sequence (LotjaGi1g1v0337400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVSLLNEDLLHNILTRLPALSFASATCVSKTWNSVSNRILSRPKLSSALSLNPSPNDAVNEVLHKILSEPIRPHFAIVN LAVGFGASKILWLVTKTLGSDIPVIVSVTNGIMGRDALTGEFKEVKWDADALISAIVDEGIVLTVGYLPGLKVEAIPLQR PAKTPQEPWIDNFVMDIKEYSASVSSCQFPVGIMLFGEATSDMELLLKKLDYAMPMDTFIVGNERGSVVYRSGNDYRSIC DNTKDIEAVALVFAQDKDRSSGSIRFHIAFSNGVSTVGARYKADSVQTNFDVCSTRLMARREGQQELLDGQSILLELKNS LPKLQQMENHIQRPEFLIRVIKHRKFSIGAEKPMPRKSIAYHGVLGVDEEYLYVDGIGIKKGDIFQFYHSDPNAALVSLT VVHDVLNNIKMGKNSRRFMGDGDNSINVFGGFIFACYGRGESFFGRHDVDSSPFLENFPGVPLGGIFCCGEIVRPCTPLI GQHQGAGPISFCLHTYGTVYLVMSYAPPSVEQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 509 | 507 | 5.3E-160 | – | |
| PANTHER | 3 | 509 | 507 | 5.3E-160 | – | |
| SUPERFAMILY | 3 | 38 | 36 | 8.37E-8 | ||
| Pfam | 4 | 45 | 42 | 5.1E-6 | ||
| SMART | 6 | 46 | 41 | 6.0E-4 | ||
| SMART | 335 | 475 | 141 | 0.0093 | ||
| Pfam | 360 | 473 | 114 | 4.6E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0337400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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