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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0337400 |
| Transcript ID | LotjaGi1g1v0337400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box/LRR-repeat protein family; TAIR: AT5G63520.1 F-box/LRR protein; Swiss-Prot: sp|Q9FMV0|FBL91_ARATH F-box/LRR-repeat protein At5g63520; TrEMBL-Plants: tr|I1KC16|I1KC16_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0337400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:79771537..79779152) extracted from Lotus japonicus Gifu genome v1.2.
ATGATGCTAGCCCAGTGTTTTACCGCTTTCTTTCCTAGGCACCGTGTCGGGGGTTGTGTCTGCCTGAACCTGAAGCACTG AACTCTGATGATGTTTTCTCATGTCTGAAGTTTCAAGTTTGAACCAAAATGGAGGAGAATCCATCGCCATCATCAACACT CAACAGCTTCGAACATGGGCGTGAGTTTGCTGAACGAGGACCTTCTTCACAACATTCTAACCAGGCTTCCTGCCCTATCG TTCGCTTCAGCAACTTGCGTTAGCAAAACGTGGAACTCTGTCTCCAATCGCATCCTTTCTCGTCCCAAGCTCTCCTCTGC GCTTTCTCTCAACCCTTCACCCAACGTAAGCAGCTTCATGCTTCTCATTCTTCAATTTCTGTGTGTCTTTGTGTTCAGTA TCTGATTAATAGATCATGCAAATTGTCAGTTAGTTAGTTAGTTAGTTAGTTAGTTTGTTTGTTTGTTAATCTTCAGTTAA CGATGTGCAGGATGCAGTGAATGAGGTTCTTCACAAGATTCTGTCCGAGCCCATCCGACCTCATTTTGCTATTGTCAATC TTGCAGTTGGATTCGGAGCGTCCAAGATTCTGTGGCTTGTAAGTTGTAAGGAATTGACACTCTTTTTTTAGTGCAAGCAG TATTTGTATTATCATATGCAATTGACTTAATGCCTGTGGTGCAGGTTACAAAGACATTGGGTTCCGATATTCCAGTTATT GTCTCCGTGACAAATGGTATTATGGGAAGGGATGCTCTTACGGGTGAATTTAAAGAGGTTGAATGTTGATATTTGTTTCC TTTTGAGCTGGAGATTTGCTAGACTCATGTAGATAATTTGTGCAGGTCAAGTGGGATGCCGATGCGCTTATAAGTGCCAT TGTAGATGAGGGCATAGTGTTGACTGTTGGCTACTTGCCAGGATTAAAAGTTGAAGCTATACCATTGCAAAGACCAGCCA AGGTAGTAAAATCTATTCAAGAATTTGGATTTTGTACTCTCAGAATATGAATGTGTGTAAGTCACATTGAAAATAAATAC AGAATGTACAACCCAAGGTAGTTTCATGCAAAAGGTGCCGTTAAGCAGCCAGGGGGTTTTTATGATACCTCGTGGCAAGG GCAGCTTACTGAAGAAAGGTGTTAAGTATAGATGAAAGATGAAAAAACACAGAATATGTGGACATTTTGCATTAGTTTTA CATATAAATTAACATCTCAATTTACAAAACAGAATAGTCGAAAGACTGGTATTAATTATTTAACTTTATGGATATTTTAC CCTCAGTATTTTGGGAATTCTTTAAATGTAAATAAGATACTAAAGCCATGCCTAGTAAGAACCAGAATGGTCTAAGACAT CAGAGATTTGTGCTTCAACTAGCCAGAGTTAGCAAAATCTTTGGTTTTCTTGTAGGACTAGCTTCTCATAGTGATTTCTG ACCCTTTTCACACAAAAGGTCACTTGTTCGGATAAAGTGATATTGTCGGGTAGTATCATGAAATCGGTGGAATTACCAAT CTTCACTAGTGCAACCTGTGACTCTGACAGGTTGAGCTGGGCGAACCTGGGAACCATGCAACTCACACCTGTGTTTTTTA TTTCCTTTGGTTTGATGTCACATTGAGTTCGACTTCTTTGGTTTTGATAGCTGTGGAAGGGGGGAGGTGTGATGACGATG CAGTTTCTTGTGCAGTCAGGGGAGAGGGTCACAAGAAGGTGTGTGTTCTGGTGTGGGACATTGGGTGGACCCTATAATGC TGTTATTGGGGTTTGATGGGCTTTCCATTGGTTCTGAATATCGTTTTCATGGTATTTTCATATGGAAAATGATTTATCCT CCTACTAATCCTCCTACAAATCCTCCTACACACTAAATGAAGCAAGAAGTTATTGCCTTTGGTATCTTGGAAATGTAAAA AACACTTAATTCTTTCTCCATTTAGTGTGTAGGAGGATGAAGTAGGAGGATATATCAATGCTCCATTTTTGTATATTCTG GTTGCAAGGGCAGTGTTGACATGTACTTTCTGGTTAGAAGTCTAAAAATTTGAGTGCTAGAAAATTGGTCTGCATGTGAA CGAAGATTAATGTATTATAAGGATGTAGTAAATGAATGGAAGTGTAACCATGCTTTATGCTTTTATATTTATAATTATCT GTGGCAGCAGACACCTCAAGAACCATGGATTGACAATTTTGTGATGGATATCAAGGAATATTCTGCCTCTGTCTCCAGTT GCCAATTCCCTGTTGGGATTATGCTGTTCGGAGTAAGTTAATGGTTGTGCACTTATTTACAAATAAATCACTATTTTTAG CATTCTTGGTTCTGTTTTTAACACTTTGATTTGGCTTCGCAGGAAGCAACCTCTGACATGGAACTGCTTCTGAAGAAATT GGGTGAGTGATGCTTGTATACATATATTTTGCTACCAATTGTTATTGTCTTTCCTAATTCTGATTTTTCTTCATATTCTC ATTTACTCTTTACTTTTCATGGTAAAAAGTATTAGGAAATTTGGTGTTTTGCATGGTAGAATGAGGTTTATGCTTCATTT TTGGTGTGTGATAAAAGGGTGTTTCTTAGAGCTCATACATGTGATCCTATATTTTATCGAAAGATATTTGTTACAAAATT TCTATGGGATACATAGTGGTAATTTGATACTCGAATTTAGATGAGGTGACTTTGTATTGTGTTAGTTCTGTAATTGAGAA CATGACTTCAATTTACACCTTCCTGCTACTGGCCTGTGCTTGGTTTCTTTTTATTTTAATGATGTCTTGTTTTATATCAG ACTATGCCATGCCGATGGACACATTCATTGTGGGTAATGAGCGAGGCTCCGTTGTATACAGAAGTGGAAATGATTATAGG AGCATCTGTGATAATACAAAGGACATAGAAGCTGTTGCTCTTGTATTTGCTCAAGACAAAGACAGGTCTTCTGGTACTTC TCATTCTTGATATCTTTTTGGTAGCTCTTGCTACCTGATGGACAATAGAATTCATGAAACTGTTACAGTGCATGCAATCC CATTTCATTAATGGAGAATGTAATTTTTCATATTTCTCAAAGGATGTTAGGTTTGAAAACTTCTGTAATTTTAGTCGTTA GAAACTTAGAATATGTATTTTATGCTAGAGAAATTTGGGTAGCTAATCAAACAAGTATTAAGAACAAATAAGTGGGAATT TTTTTCAGGTTTGATTAGGATGTCTGGAAATATCAATCGCTTTGCCTTTTCAAATGAGGACAGAGGTTGATAATGCAAGT ATTTTCATTCCTTGTCTTCTTTAAGCACTACTATTTGATTTTGTTATTGCTCCTTTTTTTGGGGCAAGTTAGGAAATTCC TGTTGGGATCTAAGTGGGTGATTGAGGGAAATGAGTTTTTCTTTGGGGGGGAGGGTAATTAAACACCCTCCTCCTAAAAT CTAAAGGACTGTTTTACAACTCTGTCAGCTATTTCTTTGTAACACTTCCTACTCTTCTTCTGCCTTTATGTGTGCACATG TTGAATAATGGAGTCTATCTTGTATGTGATTTTTTACTGCCACAATTGTTTTTAGAGTTGCAAGGCGTGCTTATAAGTAT CATCTTATTTTAGTTTAGTTTTTGCAATTCTCTACAAGTTGCTGATCTTTGTTACGGATTGATTTTGCTGCAGGAAGTAT TAGATTTCATATTGCATTCTCAAACGGTGTTTCAACTGTGGGTGCTAGATACAAGGCAGATTCAGTTCAAACAAACTTCG ATGTATGTTCTACAAGGCTAATGGCTAGGCGGGAAGGGCAGCAGGAACTTCTTGATGGTCAGAGTATTCTACTTGAGCTT AAAAATTCGGTGCGTGAATATTTGCATTTTTTTGGACAAAACTATAAATTCATTTCATTAAGGGAAAATTGATTTTTAAG ATTATTAAGAAGGAATATTTAATCTTAAGAGATATAAAACATGTAAATTTAGTGAGAAGGACCATTAGATTCACCTAAAA GACAAAAAAAAACCCTTGTGAAGAAGTTACTGAGTTATAATTTCAATTTCTTAAGAACTTGTTGCAACCGAGAGCCAAAC GAGGAAACTTGCTTTGACCATCATAATTGTTTTCAATTGAATTCTGGTACACAAGTAAAGGCAAATTTCTTAGAAATCAG TAAGGAGATTCATTTTCTCCCATTCTCAAGATATTTTCAATAGTTGTCATAAATCCAAATTCCAGAAACTATTTAAAAAA CATAGCCTTACACATCAAAGCAAAAAGAGAGGAAAATAACCAATTAAAAAAATATCTCAAGTACTGCTCCAATGTCTAAA TAGAGCAATTTCCCCTTTTTTAGACTTGACAAAACCCCTTTGATAGTTCACAGCACTTGATAAAGGGGTGAAAAACCAGT GCAGAATTGACAAAACAAACTACAAAAGACTCAATGTGAAGATAGAGGGATGTTTGATTGATGAATTGCGCATTTGCTGT TTATACCTCAATCGAAGATGATAACTTTCAAACAGGGAAAAAGAGAAGCCATTAGTTATTTAGAGCATAAGAAAAAACAT TCTCGTAGGCAACCAAGGTTGCGGTACCCCACCGAGCAGCACCGCGTTGTCGACAGTTCGATGGCCTTCTTCCCTCTCAC TGTCGCAAGCACTCGCTATTTCTACAAACCCAGATTATGGCTATGGAAACTATGGGTTGCACGATTAGAGACCTTGGAGA TGCACCATGAAGAGAACGTGGTTGAGAGATAGTTTTTAAAACACAACCAAAATAAAGAAACCACTTTTTGTGGTTTTGAA AAACCGAGTAAAACTGTTTTGAAAGTTTTAAAAAACCGATTGAAAACCATTTTAGCCGACGTGTTTCGTTTTAAAAATGA CATTTAAAAACCAAAAACCACAAACTTACAAGTTGCAACCACCCCGAACGGGGCCTACTTGAGTGTTGCAAGGTTGTCAA AATCGAGATCCTTCTTTAAGATCAAGATAGGGGGGGGGTAAAGGATCATAAAACATGTGATCGTATGAATAGTACTATCC TGCCAAAACTTAAGTCTCTTTTAATATAAATATGGTCATATAAATTAGCTAATATATGTAATAATAACACTAAAATTCAA GAATTCAGATATTTATTTTGTAGCTATTATATTGTTCATAGCTAAATGTCTATTTCATGATATTTATCTGGCTGGTTTTC TTCTATCTCATTAGCAGTGTTATTAAACTTGAACCGATTATCGACTCGGTCAGGGTACCGGGTTGATGGGTTACAGGTCG AACCAGTGAGTCTAGTTGAACCCGTTGACTCGGTATCTATTAAAAAATATAACAAACTAACACTAATTAGCAATTCACAT TCTAAATTTAAAATTATTACCATCATATGAGTATCTAATTAAACTAAAAATAATTTGCTGCAATAAAATCTTACAATTTA TTATGGTCATATCACTACCTAAAGTAATGTAAAAAAAATTTATTCAAATCAGGAAGGATTTCTTTGTCCACTAGTTTAGC AAAAGGGAAAAGAACATGGCAACCTCGTGATGGCTGTAAAACGATAACCCAGGAACAGGCACAGTGAGGACGGCCCCTAA CTCGAGGGCACAACTTTGTTGCAGCTTTGTTGCGAATCTGTGAGAGGAGAATGCAATGTCGTTTTTTTATGTTTTACAAC TCGCCGGTTCATTAAAAAACCGACCGAGTCACTGGTTTTGATGTAAACCGGCCGAGTCATACCGGTTCTCACCGGTTCAG TTGCACAGCTGATCTGATCCTCGACTTGATTTATAGTCTGACTGGTTCAACCGGCCGGTCCAAGCCGAGTTTAATAACAC TGCTCATTAGCATATTTTTCTTTTAGCAACAACAATCTATATCCATATTGGGTATTTATATTTGTTATTTTGTGAAGAAG ATGATTGTAATATAGACTTCTGCTATATGTAGTTTTCTTTGATTTTAAGGTTTCACATCAATTCGATGTTTTGCAAAACT AATTCAATAAAATTTGTGCTTGTGGTTTTTATATTTCTTCTTCTTTTGTTTTTATCTATTTTTTTCCCCTTAGCTTCCGA AATTGCAGCAGATGGAGAATCACATCCAGAGACCAGAGTTCCTCATTCGGGTAATTAAACATAGGAAGTTCTCCATTGGA GCAGAGAAGCCAATGCCAAGAAAGTCTATTGCATATCATGGAGTTTTAGGGTATGATATAGACTATTCCCTTTGAAGATT GTAGGTCTTTTAGTACCTCATTAATATTAATTCTTCTCTGGATTCCTCTCGTGAATTTTTCCATTTTTGTTCTGCATCAA CCAGATAGTGTGTTATAGCTTTTAATCCCGTTTGGCGCCCTGACCTCGATTGGGGATAGGAACAGGGACAACCCCCCCCC AGAAAAATTTGGGGACCGGGATGGGGTTCATTGTCCCAGCCCCATAAAATACTATAATACCCTTACAAATATTGGATGAC TTATAATGAAGACTTTCATTTGGATGAGTTGGATGGTCGAGGGAATGTTTTGAGTGTTTGGTGAATGTACAATTTTATTC TTACTCTGAAGTCTAATTCTGTAAAATAGAAAAATGCACACATGCATGATCTTCTAGTTTTTTTTTCTGACATGGATCCT GAAATGAAATACAAACATGCACAAGAGTTTAACAATAGTTGAAATTATTAATTAATTTTATGATAGATGGTAATTTTTTT AATTTAATGATTCTTTTAAAATTACTTTCTGATAACCAAAAAGAAAAGATGCTTTTCTGACATTTGCAATGAAATTGAAA TTGGCTAGACTTCGTGATAACCATTTGAAGTGATATACTTGTTTCTATTCCGTTAGATATGCCCATTATATAATCAACTT CTGTTCTTTCTCTTAAATTTAATGGTCTGCTCCCCAGTCTATTGTAAACAAACAGTCATGAAAGAAAAGACTAAAAGTTG TTCATGTTTTGGACAGAGTTGATGAAGAGTATCTATATGTTGATGGAATTGGCATAAAAAAAGGAGATATCTTTCAGTTC TACCATTCAGATCCTAATGCAGCGTTAGTGTCATTAACGGTGGTCCATGATGTGCTCAACAATATTAAGATGGGAAAAAA TTCCAGGAGGTTCATGGGTGATGGAGACAACAGCATTAATGTTTTCGGCGGTTTTATTTTTGCTTGCTATGGCCGTGGTG AATCATTCTTTGGACGTCATGATGTGGATAGCTCCCCATTCTTGGAGAATTTCCCAGGAGTGCCATTGGGTGGCATATTT TGTTGTGGTGAAATAGTTCGTCCTTGTACCCCTTTGATTGGCCAGCATCAAGGAGCAGGCCCCATTAGTTTCTGTTTGCA TACTTATGGCACTGTCTATTTAGTGATGTCATATGCTCCTCCCTCTGTGGAACAATAGATGCTGCTCATGTTTTGTTCTC GTGATGTACATTGCTAGTTTATGGAGGATGCTCTATCCTATGGTGTATCAGATAATACCATTTTGTTACATGGAGATGGA GTTTACTTGTTTTACTATCACAAAATCACTATGAAACTGACTTCCAAGTCTTTTGTAATCTTTTCACGGGTTTGTGTGGT GGTTAGAATAAATAAT
CDS sequence (LotjaGi1g1v0337400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATATCAAGGAATATTCTGCCTCTGTCTCCAGTTGCCAATTCCCTGTTGGGATTATGCTGTTCGGAGAAGCAACCTC TGACATGGAACTGCTTCTGAAGAAATTGGACTATGCCATGCCGATGGACACATTCATTGTGGGTAATGAGCGAGGCTCCG TTGTATACAGAAGTGGAAATGATTATAGGAGCATCTGTGATAATACAAAGGACATAGAAGCTGTTGCTCTTGTATTTGCT CAAGACAAAGACAGGTCTTCTGGAAGTATTAGATTTCATATTGCATTCTCAAACGGTGTTTCAACTGTGGGTGCTAGATA CAAGGCAGATTCAGTTCAAACAAACTTCGATGTATGTTCTACAAGGCTAATGGCTAGGCGGGAAGGGCAGCAGGAACTTC TTGATGGTCAGAGTATTCTACTTGAGCTTAAAAATTCGCTTCCGAAATTGCAGCAGATGGAGAATCACATCCAGAGACCA GAGTTCCTCATTCGGGTAATTAAACATAGGAAGTTCTCCATTGGAGCAGAGAAGCCAATGCCAAGAAAGTCTATTGCATA TCATGGAGTTTTAGGAGTTGATGAAGAGTATCTATATGTTGATGGAATTGGCATAAAAAAAGGAGATATCTTTCAGTTCT ACCATTCAGATCCTAATGCAGCGTTAGTGTCATTAACGGTGGTCCATGATGTGCTCAACAATATTAAGATGGGAAAAAAT TCCAGGAGGTTCATGGGTGATGGAGACAACAGCATTAATGTTTTCGGCGGTTTTATTTTTGCTTGCTATGGCCGTGGTGA ATCATTCTTTGGACGTCATGATGTGGATAGCTCCCCATTCTTGGAGAATTTCCCAGGAGTGCCATTGGGTGGCATATTTT GTTGTGGTGAAATAGTTCGTCCTTGTACCCCTTTGATTGGCCAGCATCAAGGAGCAGGCCCCATTAGTTTCTGTTTGCAT ACTTATGGCACTGTCTATTTAGTGATGTCATATGCTCCTCCCTCTGTGGAACAATAG
Protein sequence (LotjaGi1g1v0337400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDIKEYSASVSSCQFPVGIMLFGEATSDMELLLKKLDYAMPMDTFIVGNERGSVVYRSGNDYRSICDNTKDIEAVALVFA QDKDRSSGSIRFHIAFSNGVSTVGARYKADSVQTNFDVCSTRLMARREGQQELLDGQSILLELKNSLPKLQQMENHIQRP EFLIRVIKHRKFSIGAEKPMPRKSIAYHGVLGVDEEYLYVDGIGIKKGDIFQFYHSDPNAALVSLTVVHDVLNNIKMGKN SRRFMGDGDNSINVFGGFIFACYGRGESFFGRHDVDSSPFLENFPGVPLGGIFCCGEIVRPCTPLIGQHQGAGPISFCLH TYGTVYLVMSYAPPSVEQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 335 | 335 | 3.6E-88 | – | |
| PANTHER | 1 | 335 | 335 | 3.6E-88 | – | |
| SMART | 161 | 301 | 141 | 0.0093 | ||
| Pfam | 185 | 299 | 115 | 1.9E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0337400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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