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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0348000 |
| Transcript ID | LotjaGi1g1v0348000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aspartic proteinase nepenthesin-1; TAIR: AT1G09750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|O04496|AED3_ARATH Aspartyl protease AED3; TrEMBL-Plants: tr|Q2PEZ2|Q2PEZ2_TRIPR Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0348000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81664863..81668287) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTTAAAAATAGCTTATGAATAAGTGCTTATGTCATAAGCGCTTATGACCATAAGCGCTTAATTAAGCTGTTTATCCA AACGGGGCCTTAATATATTGATTCAGACATCTGTTGACATGAGTCAGCCACCCGCACATAGAGAAAAGTGTCCAAATGTA TTCTCTCTCACTCATTACAAGAGCTCATATTCTCTCTTCTCCTATAAATGTGATTACACCTCCATTATATAATTATTTGA TTCATGCTATAGCACTAATTGTAATATAGAGAGATCTCAATTATATCAGAGGCTTAGTTACACCTAATAAAGCATGTTCC CTTTATTTGAGATGAAAGCCTTTTTTCGTGTTGACTAACTTTGTTTTATGATTTTTTCATAAACTGAACAACTATAAACC TAGTGTTAGAATGATCTGGAACTATTTGGTGGTACACTTATTTTTTTTATCATATGTCTCATTTATCTATATTTAGTCGT AAGTAATTAGAAGGAAAATAATTTGTAATATTATAGACATTTATTAAACACCCGATGCGTGTAAGAAAAAAAGGAAAAAA AGGAAAAAAAGAATTGATGTGATATATATAGAGCAAAAAAGAAACATGAGATACCTGTCTCATTGATATGATGTATGTAT GCATAATTGCATATCAGCATATGTTTAAGTATTATTATCCAAGTTAGAATTGGAGTGTGAGGGGAATTTTGTTGGCCAAT GCATGCACGAGATTTGAGCAAAAAAGTCTTCGAAGGCCCGTGACCGTACCGACCGCATCTCGTGCATTAGGGACAAAATA TCCAGCAATGTCAATCTGCAAACATCTCTCCCACAAATTCATCACGAGCACTCACTTTCTCAATATAATTCTTTATCTAT CCACTCCCGTGCTTCTAATCACAACAAGAAAACGTCAGTAGACATGGAGTAATGGTAGACAACAACGAAAGGAACAAGAA AGAGAAGTTAATTATGTGATATTAATTAACATGAATTACTTGATAAGTGAATTATATATTTCTAGATTAATGAGAAATAG TTTAGTGGGGATCTTAAGACCCAATTTTATGATTATACAAAAAATCATTTTAAATTGTTAATAGAATAAAATTTTGTTCA CACTTCAATTAAAGTAGAAATAAAGTGAAGAGAATTGAAGAGATAAATATGAAGATAAATAAAAGCAAAAGAAGTGATAG CTAGCTAATATGGTTGAACGAGATGAGAAAGACTGAGAAATTATAAGTGGAAATAGAGTTATAATAGTGTGAAATTGAAT AACTTTAATAACAAGTTAATAACAACACCAATAATTTTAACAACAAACAGAAGCCTGGTAGCTTGAACCTCACTCTTGCA AAACACCAAATTCCTACAGCAGTACGCAGAGCATCGATCCCTACAGTGAAACCCCATGTTTTTGTCTTCTTCTATCACCC CCAATGATCAAACGCGGTTTTGCTCTATGTTCTTTCTTGTTTTACCTACAGCCACGGCACACTCCCCCATACGTCTTGTA CTCAAACTAAACCTGTTTATTGGCCTTTCCTTCCAATTCCACACAGAAGCCAGCTCAAGTTCCATAATTGTATATTCCCT ACATAACTCACGAGAAAGAGAAACTACCAATCCCAATATAATAAACAAAACCTAACTGATCCAATTCCAAGGATGTTTTC GTAAATTACCACAAACAAGCTCATGCTCTTGCATATATTTAAGGCCTCACTCACAGGCCATGCATGCATAGTACTAACAA CTTAGTAGTATCTATCTACCTTCAATCTTAGTTATACACTTCTTTAATTTCTTTCTCTACCCACATCAACCATGAATTTC AAGTTTTTTACTGCTTTAATTCTCTACTCAGTAATTTACCTGAGTAGCAGAAGCTATGCCTTTGACCCTTGTGCTTCTCA ACCTGATGACTCAGACCTGAGCGTGATTCCCATCTATGGCAAATGCTCCCCATTCAACCCACCAAAAATCTCATGGGACA ACCGTGTCATGGACATGGCCTCCAAGGACGACCCAGCACGACTCACTTACCTCTCCGCCCTCGCCGCCCAAAAGACCGTC TCCACCGCACCAATCGCCTCCGGCCAGGCCTTCAACATAGGCAACTACATTGTCCGTGTCAAGATCGGAACCCCCGGCCA GCTCCTCTTCATGGTCCTCGACACCAGCACCGACGAGGCTTTCGTCCCGTGCTCCGGCTGCACCGGCTGCTCCACCACCA CCGCTCCATTTTCCCCCAAAGCATCTACCACATACAGCCCGCTCGACTGCTCCGTCCCACTGTGCGGCCAGGTCCGCGGC CTCTCCTGCCCCGCCACGGGCTCCGCCACGTGCTCCTTCAACCAATCCTACGCCGGCTCCACCTTCTCCGCCACACTAGT ACAAGACTCCCTCAGCTTAGCCACAGACGCCGTCCCCAACTACTCTTTTGGTTGCATTAACGCGATCTCGGGCGCGACTG TCCCAGCCCAGGGGCTTCTTGGACTGGGACGTGGCCCATTGTCTCTATTGTCCCAAACCGGGACAAACTACTCGGGAGTC TTTTCATACTGCCTCCCGAGTTTCAAATCATACTACTTCTCCGGGTCATTGAAACTCGGGCCCGTGGGCCAGCCCAAGAG CATCCGAACCACCCCGCTCCTTCGCAACCCACACCGCCCTTCTCTTTACTACGTCAACCTAACCGGAATCAGCGTGGGGC GTGTGCTCGTGCCCGTTCCGGCCGAGTCTCTAGCATTTAACCCGAGCACGGGAGCTGGAACGGTCATCGACTCAGGCACA GTGATAACCCGGTTCATTGAACCGGTTTACGCTGCGGTCAGAGAAGAGTTCAGGAAGCAGGTTACCGGACCGTTCTCGAG CCTTGGTGCGTTCGACACGTGTTTTGTGAAGACCTACGAGACGCTGGCACCTGTAGTTACGCTGCATTTGGAGGGGCTGG ACCTGAAGCTGCCATTGGAGAACAGCTTGATTCACAGTAGCTCGGGGTCGTTGGCTTGCCTTGCGATGGCGGCGGCGCCG GAAAATGTGAACTCTGTGCTGAACGTGATTGCTAACTACCAGCAACAGAATCTTAGGGTGCTGTTTGATACAGTGAATAA TAAGGTTGGGATAGCCCGTGAACTTTGTAACTAGAAGCTATTAATTTTTTCATTTTGTTGGTTAGCTTTGCTTAGCTAGC AATCGCTATCCCAGTTTGGATGTTTCGTTGTGTTAAAAAAAGATGGTGTGGCCACGGTGAATAAGCTTGCCTTGTGCCTT GCTGGAAAGAAGATATTGAATGTGAAATTAATGCGATTATCTTTTTGAATGTTTGATAGTTCCGTGAGGATGCACACTGC TTGCTTTGAATCGGTTGTGACTAAAATAGAATTTGAACAAATTAAAAGTGTTCGATTTGGTTTTG
CDS sequence (LotjaGi1g1v0348000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATTTCAAGTTTTTTACTGCTTTAATTCTCTACTCAGTAATTTACCTGAGTAGCAGAAGCTATGCCTTTGACCCTTG TGCTTCTCAACCTGATGACTCAGACCTGAGCGTGATTCCCATCTATGGCAAATGCTCCCCATTCAACCCACCAAAAATCT CATGGGACAACCGTGTCATGGACATGGCCTCCAAGGACGACCCAGCACGACTCACTTACCTCTCCGCCCTCGCCGCCCAA AAGACCGTCTCCACCGCACCAATCGCCTCCGGCCAGGCCTTCAACATAGGCAACTACATTGTCCGTGTCAAGATCGGAAC CCCCGGCCAGCTCCTCTTCATGGTCCTCGACACCAGCACCGACGAGGCTTTCGTCCCGTGCTCCGGCTGCACCGGCTGCT CCACCACCACCGCTCCATTTTCCCCCAAAGCATCTACCACATACAGCCCGCTCGACTGCTCCGTCCCACTGTGCGGCCAG GTCCGCGGCCTCTCCTGCCCCGCCACGGGCTCCGCCACGTGCTCCTTCAACCAATCCTACGCCGGCTCCACCTTCTCCGC CACACTAGTACAAGACTCCCTCAGCTTAGCCACAGACGCCGTCCCCAACTACTCTTTTGGTTGCATTAACGCGATCTCGG GCGCGACTGTCCCAGCCCAGGGGCTTCTTGGACTGGGACGTGGCCCATTGTCTCTATTGTCCCAAACCGGGACAAACTAC TCGGGAGTCTTTTCATACTGCCTCCCGAGTTTCAAATCATACTACTTCTCCGGGTCATTGAAACTCGGGCCCGTGGGCCA GCCCAAGAGCATCCGAACCACCCCGCTCCTTCGCAACCCACACCGCCCTTCTCTTTACTACGTCAACCTAACCGGAATCA GCGTGGGGCGTGTGCTCGTGCCCGTTCCGGCCGAGTCTCTAGCATTTAACCCGAGCACGGGAGCTGGAACGGTCATCGAC TCAGGCACAGTGATAACCCGGTTCATTGAACCGGTTTACGCTGCGGTCAGAGAAGAGTTCAGGAAGCAGGTTACCGGACC GTTCTCGAGCCTTGGTGCGTTCGACACGTGTTTTGTGAAGACCTACGAGACGCTGGCACCTGTAGTTACGCTGCATTTGG AGGGGCTGGACCTGAAGCTGCCATTGGAGAACAGCTTGATTCACAGTAGCTCGGGGTCGTTGGCTTGCCTTGCGATGGCG GCGGCGCCGGAAAATGTGAACTCTGTGCTGAACGTGATTGCTAACTACCAGCAACAGAATCTTAGGGTGCTGTTTGATAC AGTGAATAATAAGGTTGGGATAGCCCGTGAACTTTGTAACTAG
Protein sequence (LotjaGi1g1v0348000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNFKFFTALILYSVIYLSSRSYAFDPCASQPDDSDLSVIPIYGKCSPFNPPKISWDNRVMDMASKDDPARLTYLSALAAQ KTVSTAPIASGQAFNIGNYIVRVKIGTPGQLLFMVLDTSTDEAFVPCSGCTGCSTTTAPFSPKASTTYSPLDCSVPLCGQ VRGLSCPATGSATCSFNQSYAGSTFSATLVQDSLSLATDAVPNYSFGCINAISGATVPAQGLLGLGRGPLSLLSQTGTNY SGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNLTGISVGRVLVPVPAESLAFNPSTGAGTVID SGTVITRFIEPVYAAVREEFRKQVTGPFSSLGAFDTCFVKTYETLAPVVTLHLEGLDLKLPLENSLIHSSSGSLACLAMA AAPENVNSVLNVIANYQQQNLRVLFDTVNNKVGIARELCN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 5 | 15 | 11 | - | – | |
| PANTHER | 11 | 440 | 430 | 1.6E-193 | – | |
| PANTHER | 11 | 440 | 430 | 1.6E-193 | ||
| Phobius | 16 | 23 | 8 | - | – | |
| Phobius | 24 | 440 | 417 | - | – | |
| Gene3D | 75 | 263 | 189 | 4.1E-33 | ||
| SUPERFAMILY | 92 | 439 | 348 | 4.12E-78 | ||
| Pfam | 99 | 263 | 165 | 8.4E-34 | ||
| ProSiteProfiles | 99 | 435 | 337 | 33.884 | ||
| Gene3D | 264 | 440 | 177 | 4.7E-43 | ||
| Pfam | 286 | 435 | 150 | 1.9E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi1g1v0348000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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