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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0349500 |
| Transcript ID | LotjaGi1g1v0349500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT1G14380.1 IQ-domain 28; Swiss-Prot: sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31; TrEMBL-Plants: tr|I1J5M2|I1J5M2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0349500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81914703..81918519) extracted from Lotus japonicus Gifu genome v1.2.
CCAAATCATACCCTCTGCTTCTCTACTCTCTCTCGCTCACTCTCTTCTCGACGGCGCGCACCTCCATCGTTAGGGTTCCT CTTCATCGCTCATACCTCCATCGTTAGGGTTCCTCACCACCGTGCTTCCATCATCAAACCACACCTTCCTTCTGCTCTGC TTCGTTTTCACCTCACCGTGCTTCAATCAATCAAACCACACCTTCCTTCTGCTGCTTCGTCTTCACCATCGCTTCCATCA CTCAAGCTCGTGTGGGTTCTGCTTCTTCTTCACCGAGCCCGTCCGCTCCAGCGCGACTGCATCCCACGGCGCGCCGCACC TTCCGCTGCCATTATCAAGGTTTGGTTTGTAACCGATATTTTTCCTGCAATTTTCCATCTTCTGTGCTATGTTTTTTCTT TTAATTGCTATGGAAGCCTCTGATTTTTTCTGAACACTGCAATTTTCTCTTTTTATGAATGGTATGTGGAGGAGGAATTC TGGTTTTGTTCCATTGCTGGTGTTGTTACAGGATGGTTTGGTCACGTTTTTATGGGCGTTCCAAAGTTTGTAAGGCCATA AGTTTTATTGGATTTTACCATAATTTCTTTTAGATTTAACTTCAAATAGACAGTTTGTTGCTAGATTAACTAATCTATTT TTTGTTTTGTTTTTGGTTTTTTAGCTTCAAACTGACAGTATTGGGTTTGATTCCTATTGGGTTAATGCAGTACGGGGACA CTTCCCTTTGGAATTCTAGGGCTTCCTGTTCACTCTTTTGACTTCTAGTTTTTGTTCTTGTTCTTGTCTGTCCCTATTGG AAATTAGGTAGTGAGTAGTGGGGTATGGTTTTGGTTTTTGAGTCTTCAACTCTTTTATGGTATTTTTCTCTGCATGACTT GCCCACATGATGTCCATTATTTTACTTGAGAATGAATATATGTTGGGCTGTTACTTTATGGGTTTTCTTAAATTAAGTTT TATGTTCGGTTGTTTAATTTAGTTTAACTTCTAATTAGCTTGTAATTTGAGGGTCAATTGTATATTCTTTTTTTTGCAGA TTTTGATGCTTGAGTTTTGTGCTTTCCAAAACATTGATCTTTGCTGTTATGGGAAAGGACGAAGTCCTGGGAAATGGTTC AAGAACTTACTTTTGGGGAAGAAGAAATCATCATCAAAGTCTAATTCATCAAAGAATGATGATATTTTTGTAAGTTTTTT CATGTTTAGTACCTATTTGTGTTAATGATTTGTTAAAGGCTGAGATAATATCAATGCTGTTGCCTTTAGGTTGTGAGCAC TTAGACAAGTTGTAACTTTTTTTGTTTTAATTTATTGATGTACATAGAAACCTTCAAGTAACAAGGATGTGCTGGGGTCT TCTGAGGTGTCTGTGTCGGCTCAAACTGTGGATTCTTTGATCATATCCGCACCTCTATCTGGAACTAATGCTACTCAAGG AGTGGTTTCAGAAAAGGAAATAGTTAGCAGGCCATCGAATGACAGGGATGTTCTTTCAAATGGAGATAAAGAGGCTCATG CTCAGCCTATTGCTAATGTGGAAACTATCGAGAAACTCCAGCTTACAGAAGCAGCTATAAAACTTCAGGCTGCCTGCAGA GGCTATCAGGTAATTACTCCCTGATACAATTCTGCTATACCAGCTGATATAACTTGGTTATAATTATTTGGAAGACATCA TTGGCATTCCATATATCAATGCACTGGAAATGTTAATAGATACCGATGTGTTATACAACCACAGTTATCTTACTTTCAAT GTTTTAAATATTCAGTAATAGAATAGAATGAAAATGTGGGTATTTCGTTTACTGTTATAGCTTTAATCTGTCCAGTTTAT GCATTTTTGTTTGAAATCATATTGTATCATTATTTATTTGATCAAGAATTGCTGTACCCATTGATTCTCAGTGTGTAAGC TATCACATGCAAACTTCCTAAGCATTGGTTATTTATGAGGAAGTTTCTCTATATATAATTAATAAACGCTTAAAGTGATT CTTGCTGTTTTTCATTGAAGGCTCGTCGAGCATTTCAAACACTCAGAGCTATCACACAACTGCAAGCTCTTATCCGTGGC CACCTGGTTAGAAGGCAAGCTGTTTCTGCATTATATTGTGTGAAAGGAATTGTTAAATTTCAAGCATTGGCTCGCGGTTA CAATGTTAGGCGTTCTGATGTTGGGCTTGCAGTCCTGAAAATTCGAAAGGTAAAAGTAATTAGATTAATTCAGCAAGTAC AATGATCTGGGCATTATTCTTAATGTTTTGGCCTTCTTAATGATCTGGATAAAATAAAGTACCCTATAATAAATCATGTT TTGGCCTTCTTAATGTTTTGGCCCTATAGGAAAACTATGCTCCACCTGACCCCTTCACCTTATTAGAACTTCTGCTGGTC TTACATGCCCAAGCAACATAAGGCAATATTCTATCATCTTTTCTACAATAGTTGCTACCCCAACTCAGCTTTAATAAATT TATTGTTAATCCAATCTTATCTTGTGTGGGCACATATCCATGACAACACTCTCATCTTTTTAGCATTAATTTTACTTCTT GTTGGTTGTTTGCTGCCCAATATTCGATCTGGTAAACCATCACTTCACTTGTCTTATAACTATGGTAATATTTTTCTTCT TAGCTTGATTGAGTAAGGCTCATAGAGATAAGAAGAAGCCAAGGTGGCTTGGAGATCATGTATGGAATGGGCTATGTGAG CATTGGGAAACTCCGAAGTTCAAGGAGAAAAGTGTCAAAGCAAAGGCAAATCGGGCATCTGATCGTGAAGGATTTAGAGG GACCCTTCACATTGGTGGCTCTATCACAACATCTCAACATAGAAACAATTTGGTTAAGATTCTTCTCTTGTAGTGTATTC TCTTAATTTAGATATAAATGATATTGTCCTAATTTTTTGGTACTTGTTTTAGATGAAGAAAAATGGATTCAACCCTTCTC CACTAGACTTGTTTCGCTCTACACATCAACGCAAGGATGGTACATTTGTGGACAAGAAATCAGAGCACGTAGATGTATGA TATGCTAAACTCTTCTTTAATTTAGTATACATGAATTGCATTGGACTGGTCTATAGGACAAATATTTATGGATTGGTTGG GCTCTTGTGACATTTTTAGTGTTTTTGTCTTTGTTTCTCATACAAGGTTGTGCTTGAAATTATGGTAAATGTAGGTTAGG TATTGTAAAAGAGAATTCATGGTTGATTTTATTGTAATTAATTCTTGCTAACAGGGTGCATATGTGCGTGAAATGGAAGA TAGGACGCAAAGAGCATCTGAGCAAAATCTTCCTCCGCCAAATGAGCTAGATGTGTGGCGTGATGTGGCTGGCATGAAAA AGGGTAGAATATATGGGTTGGGATTGGAGTCCACTGTTATCAATAAACAATATCATGGCTCATGTTCTTCATCATCTGAA TGGGTAAGAAGATCAGAATTTGATCAATTGAGAAACACTATTATGGAGGAGACTCAAAGAATGGTAAAACAAATGATGGA AGAAAGGATGCAACAACCACCAATGCCAACCCCAAATCAAGAGGAGTTAGAAACTGATGAGTCAGAGAATGAGGAGGATC TTGGTGCTTTTCCATGAAAACTTTGTCAAGCTTTGTTTCTATATTTAATGTAATAGACTATGTTTAATGTAATAGTAATC TACTAGACTAGTTTAAGTAGTTCATGGTATACTTTTTGTGATGATTCAGTGATGAATTTAGGTGGATATGTTAAGATTGT GTGTTTTGTGATGATTCAATGTTGATTATGGTTATATTCATATTTTTAACACTAAAA
CDS sequence (LotjaGi1g1v0349500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTGAGTTTTGTGCTTTCCAAAACATTGATCTTTGCTGTTATGGGAAAGGACGAAGTCCTGGGAAATGGTTCAAGAA CTTACTTTTGGGGAAGAAGAAATCATCATCAAAGTCTAATTCATCAAAGAATGATGATATTTTTAAACCTTCAAGTAACA AGGATGTGCTGGGGTCTTCTGAGGTGTCTGTGTCGGCTCAAACTGTGGATTCTTTGATCATATCCGCACCTCTATCTGGA ACTAATGCTACTCAAGGAGTGGTTTCAGAAAAGGAAATAGTTAGCAGGCCATCGAATGACAGGGATGTTCTTTCAAATGG AGATAAAGAGGCTCATGCTCAGCCTATTGCTAATGTGGAAACTATCGAGAAACTCCAGCTTACAGAAGCAGCTATAAAAC TTCAGGCTGCCTGCAGAGGCTATCAGGCTCGTCGAGCATTTCAAACACTCAGAGCTATCACACAACTGCAAGCTCTTATC CGTGGCCACCTGGTTAGAAGGCAAGCTGTTTCTGCATTATATTGTGTGAAAGGAATTGTTAAATTTCAAGCATTGGCTCG CGGTTACAATGTTAGGCGTTCTGATGTTGGGCTTGCAGTCCTGAAAATTCGAAAGCTTGATTGA
Protein sequence (LotjaGi1g1v0349500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLEFCAFQNIDLCCYGKGRSPGKWFKNLLLGKKKSSSKSNSSKNDDIFKPSSNKDVLGSSEVSVSAQTVDSLIISAPLSG TNATQGVVSEKEIVSRPSNDRDVLSNGDKEAHAQPIANVETIEKLQLTEAAIKLQAACRGYQARRAFQTLRAITQLQALI RGHLVRRQAVSALYCVKGIVKFQALARGYNVRRSDVGLAVLKIRKLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 199 | 181 | 2.6E-82 | – | |
| PANTHER | 19 | 199 | 181 | 2.6E-82 | – | |
| MobiDBLite | 34 | 56 | 23 | - | – | |
| SUPERFAMILY | 125 | 169 | 45 | 2.47E-5 | ||
| Gene3D | 126 | 169 | 44 | 4.0E-9 | – | |
| SMART | 126 | 148 | 23 | 4.3E-6 | ||
| ProSiteProfiles | 127 | 155 | 29 | 10.512 | ||
| Pfam | 128 | 148 | 21 | 5.4E-7 | ||
| SMART | 149 | 170 | 22 | 6.0 | ||
| Pfam | 151 | 168 | 18 | 3.1E-4 | ||
| ProSiteProfiles | 151 | 178 | 28 | 8.48 | ||
| SMART | 174 | 196 | 23 | 410.0 | ||
| Pfam | 177 | 193 | 17 | 0.021 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0349500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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