Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0350800 |
Transcript ID | LotjaGi1g1v0350800.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0350800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:82170319..82173709) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTCTCAAAGGTTTGTGATGGGCTTTGTTTGATCATTCACAAACTAGCTGGCTCTAGAAGCCCAAAATGTAGAAATTC CAAATACCAAATTCCAAACTTAATCCTTAAGCATTTGCGTAGCCACGTACACGACGCGGTAAACTTGTGTAAATATTAAA TTCTCAACGTCGTCTTCACTCGTTAAAACCAGTTTCCTCTCCCTCACATCACACACACACACAGTTCTCAAAAAATGGAT CTCCGAGAATCAATCGAAACCCAAACCGACGTTTCCCTCACCATCGCCAAACTCCTGTTCTCGAAACATTCCAAGGACAA GAACGCCGTGTTTTCTCCCTTGTCCCTCCACGTCGTGCTCAGCATCCTCGCCGCCGGTTCAGAGGGCCCCACACTCCACC AGCTTCTCACCTTCCTCCGATCCAACTCCACCGACCACCTCAACTCCTTCGCCTCTCAGCTCGTCTCCGTCGTGCTCTCC GATGCTTCTTCCGTAGGCGGCCCTCGTCTCTGTTTCGCCGACGGTGTTTGGGTTGAACAGTCTCTCACTCTGAACCCTTC CTTCAAACAACTCGTCACTGCTGATTACCACGCTGCTTTAGCCTCTGTTGATTTCCAAACTAAGGTCAGTGATTACTGAT TTCCCTCACCACCAACATGCTTTTTCTATTTTCGGATTTCATAAATCATAACCTAATTTGTTGAATTTGAACACCTTCAT CTTCTATTGAAATGTGTTAGAAGTCCCACATTGACTAGAGATTCAATGTGGCCAAACAAGTCCTTATAAAGGTAGAGCAA CACTCAACACTTAGCTAGCGTTTGGGTTGAGTTAGGCCTCCCTAATTCTAATAAAATGATTATATGAAAAATGAAGAATC AAAGTGATTGTATTTGCATAACTGATTATTTTTAAATTTGGTGATGGTTTCAAAGGCTGTGGAAGTGGCCAATGAAGTTA ATGCATGGGCTGAGAAAGAGACAAATGGTCTTGTCAAAGATCTTCTTCCTGCTGGGTCAGTTGATGCCTCAACCAGGCTC ATCTTTGCAAATGCATTGTATTTCAAAGGTGCATGGACTGAGAAGTTTGATGCTTCAATGACTAAAGACTGTGATTTTCA CCTTCTTGATGGCACCTCAGTCAAGGTTCCCTTCATGGTCAGCAAGAAGAAGCAGTTCATTGGTGCTTTTGATGGTTTCA AGGTTCTTGGTCTTCCTTATAAGCAGGGTGACGATAAGCGTCAGTTCTCCATGTACTTGTTTCTTCCGGATGCAAAAGAT GGGCTGTCGGCTTTGATTGAGCAGGTGGCTTCGAAACCCGGGTTTCTGAAGCGAAATCTTCCTGCTCATAAAGTGGAAGT AGGCGACTTCAGGATTTCCCGATTCAAAATTTCGTTCGGGTTTGAAACTTCTGATGTTTTGAAGGAGCTGGGAGTGGTTT TGCCTTTCTCAAATGATGCACATTTGACAAAAATGGTGGACTCTTCTACTGTTGGTCAAGGCCTATATGTGTCCAACATA TTTCACAAGTCTTTCATTGAAGTAAATGAAGAAGGCACTGAAGCTGCAGCAGCCAGTGCTGTAACTATAAAATTGAGGAG TTTGCAAGTACTGACGAGGGTAGATTTCGTAGCTGACCACCCCTTCTTGTTCGTGATCAGAGAAGATTTGACCGGAACAG TACTATTTACAGGGCAGGTGCTCAATCCACTTGCTGGGTGATATTAGCTGCCATACTGGAGAACATGTAATAACTTTGTT AGTGAGACTTCAGCCCTTCCTTTGCTGTCTTGTATTTCTTATGTTCCTGTTATCAGAAATGGTTTGATACGTGATTTAGG AAAATGATACACATGGATCAGCGTTGTATACTTTAATTTTCATTGGTAATCGTTTGTACTTACTAGTATAGGATCTTATG TACTTACCTCTTCTAAGGGTTCTGCGAATAGCTTACTATTAAACTTTCAATTCGATAGTAAAACAATAATGAAGTTGATA ATGTGATTTGAAGTAGAGGAAAGTCCAGAATTTGTTAATGTATTTCATGAATATTTTGAACTGCACTCTTTATAATTGTT GTTGCTTCATGAGTTAGATTTTGTAACTTATCTATCCCTCTTACCAATAGCTCTTGAGTTGAATGTTACACTCACGTGGC GATGAAGCAGTAGAGAGATATACACATAGAACACAGGGAGCAAGCCTGGTTGTATTGCCAATGAATAAGGTTATATTTGG ATGCTCATCGTCACTCATGCAAGTGGCCGTTAACAAACACTTTGTCACTCGTGCAAGTGGACTTTAACACGCATCTTAAG AGAAAAGGTGAGTGGAATTCAATTTAATTGAAATAAAATCTTGTCCATGTTATACTCAATGGATATTCAAAGTGTAAAAT GTGCATTTCCTCTCATGCATTTGATCTTTGAGACTAAGTTAGGGAATGCCAACATCTAAAGGGTAGTGCTGCATTGGTTG ATTTTATTTCTGTTAATAAATTAGTGGTTAACGAAAGCATTTGAGCAGTTTGTTTTCATGGTGTTTACTGTTTACAGTTT AGATAGTATCCTTTTCTCATCTCATGACTCGGGTGAGTCAGATCGTTATACCTCCTCGAAATATATATATGCCCCGTTTG GAAAAACAGCTTAATTAAGCACTTATGGTCATAAGCGCTTATGACATAAGCGCTTATTCATAAGTTATTTTTGAAAATTT ATTGAAATAAATTAAAAATAAGCTGTATATAAGCATAAGCTATCTTGAGTAGCTTATGAAAATAAGCTGAAAATAGCTTA TGGCAGGTCATAAGCTGTTTGCATAAGCTCACTCAAACACTAGCATAAGAGCTTTTGCTGTCAGATAAGCTCAAATAAGC TCTTCCAAACTGGGCCATATTCAAAAACTTGTAAGTTATGGTCTTTTATATGCTTTCCTGCAAGATAAAATGTTAAATGA ACCTCTGCTCTAATTTAACATTGTTCCATATATTTTAGTTGTTTCCATAGCTGGAAAAACCAGCAACATTTGTCCTGTCC CTAAAAAGCATATTTTGGAGTTACTATTGGTGACAGTAGAATTGAACTCAACATTACTTTCAATCATGAAAGAATCCAAA AAGCTTTGCCTGCTGGTTACTTGATTCAACCACACTTACTGATTATCTTGTCAAGAAAGTAAGTCACATTTTTTATTGGC CTTCTCTCAATAAGCACTTTGTTTGCACTAAAAATTAGGGTCAATAGTCAGCAGTTGTTTAATTACATGTTCCTATTACC ATTGTCCATTTCTCCTCTAGGATTAGATTTGCATGTCTTAACAATGATGATGACCTTGTATCAAAGAATGACACATGCAT ACATCTGAGGTATCAAAAACAATCACTTGAT
CDS sequence (LotjaGi1g1v0350800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCTCCGAGAATCAATCGAAACCCAAACCGACGTTTCCCTCACCATCGCCAAACTCCTGTTCTCGAAACATTCCAA GGACAAGAACGCCGTGTTTTCTCCCTTGTCCCTCCACGTCGTGCTCAGCATCCTCGCCGCCGGTTCAGAGGGCCCCACAC TCCACCAGCTTCTCACCTTCCTCCGATCCAACTCCACCGACCACCTCAACTCCTTCGCCTCTCAGCTCGTCTCCGTCGTG CTCTCCGATGCTTCTTCCGTAGGCGGCCCTCGTCTCTGTTTCGCCGACGGTGTTTGGGTTGAACAGTCTCTCACTCTGAA CCCTTCCTTCAAACAACTCGTCACTGCTGATTACCACGCTGCTTTAGCCTCTGTTGATTTCCAAACTAAGGCTGTGGAAG TGGCCAATGAAGTTAATGCATGGGCTGAGAAAGAGACAAATGGTCTTGTCAAAGATCTTCTTCCTGCTGGGTCAGTTGAT GCCTCAACCAGGCTCATCTTTGCAAATGCATTGTATTTCAAAGGTGCATGGACTGAGAAGTTTGATGCTTCAATGACTAA AGACTGTGATTTTCACCTTCTTGATGGCACCTCAGTCAAGGTTCCCTTCATGGTCAGCAAGAAGAAGCAGTTCATTGGTG CTTTTGATGGTTTCAAGGTTCTTGGTCTTCCTTATAAGCAGGGTGACGATAAGCGTCAGTTCTCCATGTACTTGTTTCTT CCGGATGCAAAAGATGGGCTGTCGGCTTTGATTGAGCAGGTGGCTTCGAAACCCGGGTTTCTGAAGCGAAATCTTCCTGC TCATAAAGTGGAAGTAGGCGACTTCAGGATTTCCCGATTCAAAATTTCGTTCGGGTTTGAAACTTCTGATGTTTTGAAGG AGCTGGGAGTGGTTTTGCCTTTCTCAAATGATGCACATTTGACAAAAATGGTGGACTCTTCTACTGTTGGTCAAGGCCTA TATGTGTCCAACATATTTCACAAGTCTTTCATTGAAGTAAATGAAGAAGGCACTGAAGCTGCAGCAGCCAGTGCTGTAAC TATAAAATTGAGGAGTTTGCAAGTACTGACGAGGGTAGATTTCGTAGCTGACCACCCCTTCTTGTTCGTGATCAGAGAAG ATTTGACCGGAACAGTACTATTTACAGGGCAGGTGCTCAATCCACTTGCTGGGTGA
Protein sequence (LotjaGi1g1v0350800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLRESIETQTDVSLTIAKLLFSKHSKDKNAVFSPLSLHVVLSILAAGSEGPTLHQLLTFLRSNSTDHLNSFASQLVSVV LSDASSVGGPRLCFADGVWVEQSLTLNPSFKQLVTADYHAALASVDFQTKAVEVANEVNAWAEKETNGLVKDLLPAGSVD ASTRLIFANALYFKGAWTEKFDASMTKDCDFHLLDGTSVKVPFMVSKKKQFIGAFDGFKVLGLPYKQGDDKRQFSMYLFL PDAKDGLSALIEQVASKPGFLKRNLPAHKVEVGDFRISRFKISFGFETSDVLKELGVVLPFSNDAHLTKMVDSSTVGQGL YVSNIFHKSFIEVNEEGTEAAAASAVTIKLRSLQVLTRVDFVADHPFLFVIREDLTGTVLFTGQVLNPLAG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 5 | 389 | 385 | 1.2E-149 | – | |
PANTHER | 5 | 389 | 385 | 1.2E-149 | ||
SUPERFAMILY | 6 | 388 | 383 | 2.09E-107 | ||
CDD | 8 | 388 | 381 | 0.0 | – | |
Pfam | 10 | 388 | 379 | 1.5E-98 | ||
SMART | 15 | 388 | 374 | 3.4E-90 | ||
Gene3D | 28 | 335 | 308 | 6.1E-125 | ||
Gene3D | 177 | 383 | 207 | 6.1E-125 | ||
ProSitePatterns | 361 | 371 | 11 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi1g1v0350800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…