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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0351400 |
| Transcript ID | LotjaGi1g1v0351400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0351400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:82271867..82273980) extracted from Lotus japonicus Gifu genome v1.2.
CATTGCCGTAGCCAACAGACAGTCTCAAAGTGAGGAGACGGTTGTCTTCTATAAATAGGATAAAGAAGGATTGACATACA ATTTTCACTTAACATAGTGTGATATAAGAAAAAAATTGAGAAAAAGATGAAGGGTGCTGTGAAAGGAAAAGAAGAGAGGG ATAGGAAGAGAAGAAGAGATTTGAGATGGAAGGAAAAGAAGGATGGGAAGAAGAGAAAATTTGGAGATTTTGGAAGGAAG AGAAAATTTGAGGAATCGAAAGAATCAAAACCCCTCCAGAAATCAAACAGAAGCCAAACTGACGTTGCCCTTAGCATCAC GAAAGGTTTGTTCGATTCTAAGGACAAGAACATTGTGTTTTCTCCCTTGTCTCTTCAAGTCGTGCTCAGCATCATCGCCG CTGGTTCTGATGGCTCCACACTCGACGAGCTTCTCTCCTTCCTCGGATCCAATTCCACTGACCATCTCAACTCCTTCGCC TCTCAGCTCATCTCCACCGTGCTCTCCGATGCTGCTCCTGCCGGCGGTCCTCGCCTTTGTTTTGCCAACAGCGTGTGGGT TGAAAAATCCCTTCCTGTTAACCATTCCTTCAAACAAGTCATGAACACTGATTATAAGGCCACTTTAACATCTGTTGATT TCTGCACTAAGGTCAGTGATTATTAATACCAACATGCTTTTTCTATTTTGGGATTCATAACCTAATTTGTTGAATGCCTT GGCAATCAAGCCAACTAGGTAGTCTGTTTCTGTTTTGTTTATCTCTTCGTTGTTGTTCTGGTATATAACCCTATTTTATT TTTCCTGTACCTTATCCAATTTGTTAAATGACAAACTTGTGAAAATAAGATTGCTTCAAATATAAAAGATCTTCTATTGA AATGCTTATGTGAAAAATAAAGAATCACAGTTATCATAGGAACTGATTTTAAATTTGATGATTGTTTTAAAGGCTCTTCA GGTGGCCAGGGAAGTGAATTTATGGGCTGAGAAAGAGACAAAAGGCCTTATCAAAGACCTTCTTCCTCCTGGGTCAGTTG GCCACTTAACCAGACTTATCTTTGTAAATGCATTGTACTTCAAAGGTAAATGGATTGAGAAGTTTAAGGCTTCAATGACA AAAGACTATAAATTTTACCTTCTTAATCGCACCTCAGTCAAGGCTCCCTTCATGGTCAGCAAGGAGAAGCAATTCATTAG TGCTTTTAAGGATTTCAAAGTCCTTGGTCTACCTTATAAGCATGGTAAAGACGAGCGTAACTTCTCCATGTACATTTTTC TTCCACATGCAAAAAATGGGCTGTCAGATTTGGTGGAGCTGGTGACTTCAAAATCTGGGTTCCTCGAAAGCAAGCTTCCT AATCATAAAGTTGAAGTAGGTGACTTCAGGATTCCCAAATTCAAAATTTCTTTTGATTTTGAAGCTTCTCTTCTTCTTAA GAAGCTGGGAGTGGTTTTGCCTTTCTCTCAATCTGATGCCGATTTGACGAAAATGGTGGATTCTCCCAATGGTCGAGGAG ACTTACATGTTTATGAGGTATTTCACAAGTCTTTCATTGAAGTAAATGAAGAAGGCACTGAAGCTGCAGCAGCGAGTGCT TGTATATTAAAATACAAGGGTGTGCGAACACCACCGACTCGGCTAGACTTCGTAGCTGACCATCCTTTCATGTTCCTGAT CAGAGAAGATTTGTCTGGAACAATACTATTTATTGGGCAGGTGCTCAATCCACTTGATGGGTGATAATAACATCCTAAGT GAAACTTAAGCCCTTATTATGCTGTTTTGTTTTTCTTAGTTAATGTGATTTCAAGTAGAGGAAAATTCACAATTTGTTTA TGCATTTTATGAATATCTTGAACTGCACTCCTTTTGAAGATGTATTGCTTCAGAGTTGGATCTTGCAACTTATCTATCCC TCTTACTGATAGCTCTTCTTGAGTTGAATGTTACACTTATGTGGCAGTGAAGCGTTGGAGAGATTTACACGAAAACACTA AGGTAAAAGTTTGGGGTGTTGTTTTTAGATGAATCTAAATTGCAAAACAAGTTCTGTTTTGAAGTCGTTTCGAGTGGGGC ATATTGTTTTTAATCCTCTTTAAAGTGCATTTTC
CDS sequence (LotjaGi1g1v0351400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGGTGCTGTGAAAGGAAAAGAAGAGAGGGATAGGAAGAGAAGAAGAGATTTGAGATGGAAGGAAAAGAAGGATGG GAAGAAGAGAAAATTTGGAGATTTTGGAAGGAAGAGAAAATTTGAGGAATCGAAAGAATCAAAACCCCTCCAGAAATCAA ACAGAAGCCAAACTGACGTTGCCCTTAGCATCACGAAAGGTTTGTTCGATTCTAAGGACAAGAACATTGTGTTTTCTCCC TTGTCTCTTCAAGTCGTGCTCAGCATCATCGCCGCTGGTTCTGATGGCTCCACACTCGACGAGCTTCTCTCCTTCCTCGG ATCCAATTCCACTGACCATCTCAACTCCTTCGCCTCTCAGCTCATCTCCACCGTGCTCTCCGATGCTGCTCCTGCCGGCG GTCCTCGCCTTTGTTTTGCCAACAGCGTGTGGGTTGAAAAATCCCTTCCTGTTAACCATTCCTTCAAACAAGTCATGAAC ACTGATTATAAGGCCACTTTAACATCTGTTGATTTCTGCACTAAGGCTCTTCAGGTGGCCAGGGAAGTGAATTTATGGGC TGAGAAAGAGACAAAAGGCCTTATCAAAGACCTTCTTCCTCCTGGGTCAGTTGGCCACTTAACCAGACTTATCTTTGTAA ATGCATTGTACTTCAAAGGTAAATGGATTGAGAAGTTTAAGGCTTCAATGACAAAAGACTATAAATTTTACCTTCTTAAT CGCACCTCAGTCAAGGCTCCCTTCATGGTCAGCAAGGAGAAGCAATTCATTAGTGCTTTTAAGGATTTCAAAGTCCTTGG TCTACCTTATAAGCATGGTAAAGACGAGCGTAACTTCTCCATGTACATTTTTCTTCCACATGCAAAAAATGGGCTGTCAG ATTTGGTGGAGCTGGTGACTTCAAAATCTGGGTTCCTCGAAAGCAAGCTTCCTAATCATAAAGTTGAAGTAGGTGACTTC AGGATTCCCAAATTCAAAATTTCTTTTGATTTTGAAGCTTCTCTTCTTCTTAAGAAGCTGGGAGTGGTTTTGCCTTTCTC TCAATCTGATGCCGATTTGACGAAAATGGTGGATTCTCCCAATGGTCGAGGAGACTTACATGTTTATGAGGTATTTCACA AGTCTTTCATTGAAGTAAATGAAGAAGGCACTGAAGCTGCAGCAGCGAGTGCTTGTATATTAAAATACAAGGGTGTGCGA ACACCACCGACTCGGCTAGACTTCGTAGCTGACCATCCTTTCATGTTCCTGATCAGAGAAGATTTGTCTGGAACAATACT ATTTATTGGGCAGGTGCTCAATCCACTTGATGGGTGA
Protein sequence (LotjaGi1g1v0351400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGAVKGKEERDRKRRRDLRWKEKKDGKKRKFGDFGRKRKFEESKESKPLQKSNRSQTDVALSITKGLFDSKDKNIVFSP LSLQVVLSIIAAGSDGSTLDELLSFLGSNSTDHLNSFASQLISTVLSDAAPAGGPRLCFANSVWVEKSLPVNHSFKQVMN TDYKATLTSVDFCTKALQVAREVNLWAEKETKGLIKDLLPPGSVGHLTRLIFVNALYFKGKWIEKFKASMTKDYKFYLLN RTSVKAPFMVSKEKQFISAFKDFKVLGLPYKHGKDERNFSMYIFLPHAKNGLSDLVELVTSKSGFLESKLPNHKVEVGDF RIPKFKISFDFEASLLLKKLGVVLPFSQSDADLTKMVDSPNGRGDLHVYEVFHKSFIEVNEEGTEAAAASACILKYKGVR TPPTRLDFVADHPFMFLIREDLSGTILFIGQVLNPLDG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 58 | 58 | - | – | |
| MobiDBLite | 1 | 52 | 52 | - | – | |
| SUPERFAMILY | 48 | 435 | 388 | 1.11E-105 | ||
| Pfam | 56 | 435 | 380 | 1.8E-100 | ||
| PANTHER | 59 | 436 | 378 | 1.2E-138 | – | |
| PANTHER | 59 | 436 | 378 | 1.2E-138 | ||
| SMART | 62 | 435 | 374 | 4.1E-94 | ||
| Gene3D | 73 | 381 | 309 | 5.1E-121 | ||
| Gene3D | 222 | 430 | 209 | 5.1E-121 | ||
| ProSitePatterns | 408 | 418 | 11 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi1g1v0351400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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