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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0351700 |
| Transcript ID | LotjaGi1g1v0351700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0351700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:82316743..82318463) extracted from Lotus japonicus Gifu genome v1.2.
CAGAAACACAGAATTTCCCAAACTCCAAAAATCATCTCCAGCGGCTTTTTGGATTGAAAAATCTCCAAATACCAACAAGT CCTGAGTTGGAATCTCGAATAAGGCCAATAAAAATCCAAGACTCAGAGAGTTCAGATATGGGAACATTCCAATCAATCAG AAATCAAACAGACGTTGCCCTCAGCATTGCAAAACTTTTGTTCACTACAAAATATTCTGAGGACAAGAACGTTGTGTTTT CGCCATCATCGATCCACACGGTGCTTAGCATCATCGCCGCTGGTTCAGACGGCCAAACACGCAATCAACTTCTCACCTTC CTCCGATGCGAATCCACTGATTATCTCAACTCCTTAGCCTCTAAGCTTGCCTCCAATGTGCTACGTGATTCGGCTCCGGA CGTCGGCGGCTGCCCTCCCTGTTTGAGGGACAACAGCAGCCGTCATCCAGATTTCAGCGACAGCGAGGGTGAGGCTGAAG GCCCTTGTGTCTGTTTTGCCAACGGTGTGTGGGTTGAACAATCCTTTTCTCTTCACCATTCCTTCAAACAACTGTTGAAC ACTGCTTACAAGGCCACTCTGGCCTCTGTTGATCTCCAAAACAAGGTGACTAAAATACATAAATCTTCTATGTGCCTTAT AATTTTGATTTTGCATTCTCAATTAGAGATTCTTTCGTTGTTATTCTGGTATTAAATTTGATGATGTTTTAAAGGCTGAT GAAGTGATCAAAGAAATTAATTTGTGGGCTGAAGAAAAGACAAAGGGGCTTATCAAAGACATTCTTTCTCCTGGGTCACT TAACAGCTCAACAAGGCTCGTTTTTGCAAATTCACTGTACTTCAAAGCTGCATGGCAAGAGAAAGACTCGTTTGGTGAAT CAAGTACAAAAGACGGTGATTTTCACATTCTTAATGGAACATCAGTCAAGGTTTCCTTCATGACAGACAAGGGGGACCGG CATATTTGTGTTTGCGATGGTTTCAAAGTCCTCCGACTTGATTATGAGTCGGGTCCAGATACGCATAAATTCTCCATGTA TATTTTCCTTCCGGATGCAAATGATGGGCTGTCCGCTTTGGTTGAGCATTTGGCTTCTGAATCTGGGTTCTTAGAACACC GTCTTCCTAATCAAAAAGTGGAAGTAGGAGACTTCAGGATTCCAAAATTCAAGTTTTCTTTCGGAGTCGACCTTACTGAT GTACTGAAAGAGATGGGGCTGGTTTTGCCTTTCTCTCCTTACGATGCAGATTTGACAAAAATGGTGGACCCTCTTATGTG TCAAGAAAACTTATATGTTTCCAGCATAAAACACAGATCTTTCATTTCAATGAATGAACAAGGCACTGAAGCTGCAACAG TCACTTATTCAGACAATATGGGGTTTTCCTTGGGTTGTATGTATCCAAAAACAGAGGTTGATTTTGTAGCTGACCACCCT TTCTTATTCCTTATTAGAGAAAGATTGTCTAGAACAGTGTTCTTTGTTGGACAGGTGCTCGATCCTCTTCATGAATGAAA CAGCGTCCACGCCGAAAAGAATAAGAGAATCATTAGTGATATCAATATCTACTATTGTTTCGAAACATTATTATTCTTCT TTATTTGTTACACTATTTTGATTGGATTTTATCATTGGATTATTGTTACTGATTCCCTCACTGCACTGCACTGCACTGCA CTCTGCAGTTTTGTTCAAAACAGTAGAGGAAACAATACAAC
CDS sequence (LotjaGi1g1v0351700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAACATTCCAATCAATCAGAAATCAAACAGACGTTGCCCTCAGCATTGCAAAACTTTTGTTCACTACAAAATATTC TGAGGACAAGAACGTTGTGTTTTCGCCATCATCGATCCACACGGTGCTTAGCATCATCGCCGCTGGTTCAGACGGCCAAA CACGCAATCAACTTCTCACCTTCCTCCGATGCGAATCCACTGATTATCTCAACTCCTTAGCCTCTAAGCTTGCCTCCAAT GTGCTACGTGATTCGGCTCCGGACGTCGGCGGCTGCCCTCCCTGTTTGAGGGACAACAGCAGCCGTCATCCAGATTTCAG CGACAGCGAGGGTGAGGCTGAAGGCCCTTGTGTCTGTTTTGCCAACGGTGTGTGGGTTGAACAATCCTTTTCTCTTCACC ATTCCTTCAAACAACTGTTGAACACTGCTTACAAGGCCACTCTGGCCTCTGTTGATCTCCAAAACAAGGCTGATGAAGTG ATCAAAGAAATTAATTTGTGGGCTGAAGAAAAGACAAAGGGGCTTATCAAAGACATTCTTTCTCCTGGGTCACTTAACAG CTCAACAAGGCTCGTTTTTGCAAATTCACTGTACTTCAAAGCTGCATGGCAAGAGAAAGACTCGTTTGGTGAATCAAGTA CAAAAGACGGTGATTTTCACATTCTTAATGGAACATCAGTCAAGGTTTCCTTCATGACAGACAAGGGGGACCGGCATATT TGTGTTTGCGATGGTTTCAAAGTCCTCCGACTTGATTATGAGTCGGGTCCAGATACGCATAAATTCTCCATGTATATTTT CCTTCCGGATGCAAATGATGGGCTGTCCGCTTTGGTTGAGCATTTGGCTTCTGAATCTGGGTTCTTAGAACACCGTCTTC CTAATCAAAAAGTGGAAGTAGGAGACTTCAGGATTCCAAAATTCAAGTTTTCTTTCGGAGTCGACCTTACTGATGTACTG AAAGAGATGGGGCTGGTTTTGCCTTTCTCTCCTTACGATGCAGATTTGACAAAAATGGTGGACCCTCTTATGTGTCAAGA AAACTTATATGTTTCCAGCATAAAACACAGATCTTTCATTTCAATGAATGAACAAGGCACTGAAGCTGCAACAGTCACTT ATTCAGACAATATGGGGTTTTCCTTGGGTTGTATGTATCCAAAAACAGAGGTTGATTTTGTAGCTGACCACCCTTTCTTA TTCCTTATTAGAGAAAGATTGTCTAGAACAGTGTTCTTTGTTGGACAGGTGCTCGATCCTCTTCATGAATGA
Protein sequence (LotjaGi1g1v0351700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTFQSIRNQTDVALSIAKLLFTTKYSEDKNVVFSPSSIHTVLSIIAAGSDGQTRNQLLTFLRCESTDYLNSLASKLASN VLRDSAPDVGGCPPCLRDNSSRHPDFSDSEGEAEGPCVCFANGVWVEQSFSLHHSFKQLLNTAYKATLASVDLQNKADEV IKEINLWAEEKTKGLIKDILSPGSLNSSTRLVFANSLYFKAAWQEKDSFGESSTKDGDFHILNGTSVKVSFMTDKGDRHI CVCDGFKVLRLDYESGPDTHKFSMYIFLPDANDGLSALVEHLASESGFLEHRLPNQKVEVGDFRIPKFKFSFGVDLTDVL KEMGLVLPFSPYDADLTKMVDPLMCQENLYVSSIKHRSFISMNEQGTEAATVTYSDNMGFSLGCMYPKTEVDFVADHPFL FLIRERLSRTVFFVGQVLDPLHE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 421 | 416 | 3.8E-123 | – | |
| PANTHER | 6 | 421 | 416 | 3.8E-123 | ||
| SUPERFAMILY | 8 | 420 | 413 | 1.23E-97 | ||
| Pfam | 9 | 420 | 412 | 1.3E-94 | ||
| SMART | 15 | 420 | 406 | 1.1E-78 | ||
| Gene3D | 29 | 364 | 336 | 1.3E-108 | ||
| Gene3D | 203 | 415 | 213 | 1.3E-108 | ||
| ProSitePatterns | 393 | 403 | 11 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi1g1v0351700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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