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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0354100 |
| Transcript ID | LotjaGi1g1v0354100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatase 2C family protein; TAIR: AT1G47380.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9FX08|P2C12_ARATH Probable protein phosphatase 2C 12; TrEMBL-Plants: tr|I1K7Y8|I1K7Y8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0354100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:82590457..82594310) extracted from Lotus japonicus Gifu genome v1.2.
CAAGCAATGTCTAGTCGGAGTGAACATCATCAATCGGTTCCCCTTTCGGTGCTGTTGAAGCGCGAATTGGTGAATGAGAA AATTGAGAAGCCGGAGATGGTCATTGTGCATGGCCAGGCTAGCGAGAATAAGAAAGGGGAGGATTTCACGCTGTTGAAGA CGGAATGCCAGAGGGCGGTGGGGGATGGAGTCTCTACATATTCTGTTTTTGGGGTATGTTTCTTTCTCACATGGTGCTTT TCGGATTTGATAGATTGTGATTGTGTTGATAAAATCAGATAAGAACTTGAATGACATGATGATAGAGAAAAGTAAATTAT TGAGTTAGAAAGTTATGCAGTTATGCTATTGCTACTTGTTGTTCAGTTGCTTGATTCACTTATAATGCTATGATTGCTAT CTCGATTTTCATTGACATGTCTTATTTTAGTCCATAGTTGATTTGAACTGTCGGAACTCTGACATAGTTTAGCAAATTGA ATATAATGTCTATGGATAGAGAGGACCATGTTACTGACTTCGTTGTTCGGATGCTTTTCCCGAACCAGCAATGATTTTCA TATTATGGTTTTGTTCTTGATAAATTTTAGTTTGTGTGTATGTGAGACCAACAAAGTTGTGTTTTCATTCTAACTCGCTC TTATTAGTTGGATTGAAAGAATATGCTGGCCGTTATTCCAATGGATGCATATGTTATGACTTGATAAGCTTCTTCTTTTT TGTATAATTTTTCTTGCTGCATTTGCATTTTCTGATGTAGAAGTTTTACAGCTATTCGATGGCCACAACGGATCCGGTGC AGCTATATATACCAAGGAGAATCTTCTAAACAATGTTTTAGGTGCAATTCCTCCTGATCTTAATAGGGATGAATGGGTAG CAGCATTGCCTAGAGCCTTGGTTGCTGGTTTTGTAAAAACTGATAAAGATTTTCAGCAGAGAGGTATGGCTAGTTACTTC CTTGTGATGTTTTCTTTTGCCGACATTAATTATTTAGTTATAAGGCAAAATCAAATACTCACTCCATCAGGAATATTCAT ATTAATAATGTAATGTATTCTCAATTCTCACAGCCAACAAATTAAACAATAAAAGGACAAAAAAGTCAATGGGCTTTCCT TGATTCTCATCGTGTATGCTGAACATATTGATAGTATTGTGATCCCTTTGTGGCATTTTTCTAACCTCTGTTAGTATAAT GCTAATGGGACATGTCAAGAAAATTTTAAATAGTAACTCTGCAGCTTTAGCTTTGTCTAATGTGCATAGGGCATGGTGAA TAAGAACTGTCTAATATGGTTTACCCATATGGACAGTATAGTTCTGCTAGTTTTTGACATATCAGATATATATATTGCTG GAGAGTAAACATAATTTACTAATGAAAATTATGAAGCTTGTCCAATTAAGCTGTGCCTGATAGTTTTATACTTCTGACTT AATGAACTTTTGTTGTATGTTTTCTTGAGTTGCATATTGATCCGCATGTTTTATCTTCACTTGTACAGCAAAAACATCGG GAACAACTGTAACCTTTGTAATTATAGAAGGATGGGTTATAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAA CCTTCTGAAGGTGGGATTTATTACTTGTCAGCAGATCATAGACTTGAAACCAATGAAGAGGAGTAAGTTGTTAGTGGATT TGAACAAGTCTTTGGAATTACTCCATTACATTACAGCATTCTCACCCTTTCTGTTCCTTTTATCAGGAGGATACGTATCA CTTCTAGTGGGGGTGAAGTTGGTCGGCTAAATACAGGTGGAGGTGCGGAGGTACCTTTCCTTTTCCTTTTAACAGAGCAC TGTGATTTCTTGTAGAATGTGTGTGATGCCTCTTATCAGTATTTTATTCGTGCATGATGCTTGTCATGTTAAATTGCATA AGCAGAGTGTTAGAACCAGATGTTTTATTGAAGATAAACCCTAATTCCCAAACTGAGAATCAGGGCAGAGTACAAAAGAA AGAGTCCACACTCAATCTCAAGAGAGTCCACACCCTCTTCCTAGGCCCCAAAACCCAAAGTGAACTAAAAGATACCCCTA ACTCTCTAATGTCGGTTATTTATAGGCTACATGCCTCAATAACATTCTAACCAACTCACTAAGTATAACTAACAAACTAA CTAACCCCTAACCTTGAGTTCCTATCACAGAGATTCATAAGTAAATTCATACCGTAGAGAATCGAGAGTCAAGATAACTG ATGCTATTCTATTTTTGGAGGAAACTGTTTTTACTTTTGATGTTATACTGGTCAAGTGTGATCATATTTAGATTATCTCC CTTTATGATTTACTAATATTCTATTTAGGGGAAATTTACACTTGAGTTATATTCATATGCCCTGACTAGATTAATGAATT TTTTTAGGTTGGTCCAATGAGATGTTGGCCTGGTGGCTTGTGTCTCTCACGATCGATTGGTGATATGGATGTTGGTGAAT TTGTTGTCCCTGTACCATATGTAAAGCAAGTGAAGGTCGGTTACTGCTCTCCCTTGCACATGCTGCATTATGTACTTCAG TTTAGTTCTACATTGTTTTCCATCTCAATCTCATTGAGGCATAGAATACTTTATAGCATGATTTTCTACGCTCTTGGAAA GTGCAGCTGAAGATTCATTCATTTTCTTAAAGACCATCTATTCCCTTTTAAAAGTCGAAATGAAATTTTCTTGCTTTATT TCTGTAAGCGTTTTTTTTTTTGGAGAATGCTAATGAGTTCTCTCGGAACACTGATTAGGAAACAAAAATGTAAAGTATTT AATGAAAAAGAAAGCATTTATTATATTGGAAATATAAAAATCATTTAATACTTAAATTGATAGGATATATCAAATGCTCC TTAACCATATTCCCTTAGGGCCCTCTCAAATTGCTATTTGCTAGACCTTTTTTTTTCTGAAGTGTTGAATTCCTTGTTTA CCCTTCTTGCTTTCATTTTATACAGCTTTCCTCAGCTGGAGGTAGGCTTATTATATGCAGTGATGGAGTCTGGGATGCTC TAACTGCAGAAACGGTCCTTGATTGCTGTCGTGGCATGTCAGCAGAGTCTGCAGCACCACAAATTGTGAAAGTATGCTTA ACAGACATCTTTTCAAATGATTTTTGAATGCTCTAATTTCACCTTTTGGCTTATGTCATTTTGTGGTATGTGTTGTATCT TTTCTTTCATCAGGAATCTTTGCAAGCAAAGGGACTTAGAGATGATACAACCTGCATCGTTGTTGATATATTACCCCAGG AGAAGCCACCTATTTCTGTGCCAATACAAAAGAAACCGGTAAAAGGAATGTTGAAGGCCATTTTTCGGAAAAAGTCCTCT GATTCATCTATGGACAAAGAATACATGGAGCCCGATGAGGTACGGGAACTATATGAGGAAGGATCTGCTATGCTTTCAGA AAGGTTTGGTTTTGTGATAAGTTTTCTTAACATTTGCTGCTTGCCTCTAGTTGTAGTATTCTCTCTTGACATTGAAACAT CTTTGTCTGTGATGCAGGTTAGAAACAAAATATCCCCTCTGCAACATGTTCAAGTTGTTTATATGCGCAGTGTGTCAAGT GGAGATTAAACCAGGAGAGGGTATTTCAATACATGAGGGCGCGCCTAACCCCTTAAAATTACGTCCCTGGGATGGACCTT TCCTTTGCTCGAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAGGAGCATCAGGTGCTTTGATAACTCTTCCTCAT TTATGTCCAATGATCCCTTGAGTTATGTGTCCATAATTTAATTCTTTCCTTCAATTATTTTCTTTCAGATAGACTTAGCA GCGGAAGTGACTAG
CDS sequence (LotjaGi1g1v0354100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTAGTCGGAGTGAACATCATCAATCGGTTCCCCTTTCGGTGCTGTTGAAGCGCGAATTGGTGAATGAGAAAATTGA GAAGCCGGAGATGGTCATTGTGCATGGCCAGGCTAGCGAGAATAAGAAAGGGGAGGATTTCACGCTGTTGAAGACGGAAT GCCAGAGGGCGGTGGGGGATGGAGTCTCTACATATTCTGTTTTTGGGCTATTCGATGGCCACAACGGATCCGGTGCAGCT ATATATACCAAGGAGAATCTTCTAAACAATGTTTTAGGTGCAATTCCTCCTGATCTTAATAGGGATGAATGGGTAGCAGC ATTGCCTAGAGCCTTGGTTGCTGGTTTTGTAAAAACTGATAAAGATTTTCAGCAGAGAGCAAAAACATCGGGAACAACTG TAACCTTTGTAATTATAGAAGGATGGGTTATAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAACCTTCTGAA GGTGGGATTTATTACTTGTCAGCAGATCATAGACTTGAAACCAATGAAGAGGAGAGGATACGTATCACTTCTAGTGGGGG TGAAGTTGGTCGGCTAAATACAGGTGGAGGTGCGGAGGTTGGTCCAATGAGATGTTGGCCTGGTGGCTTGTGTCTCTCAC GATCGATTGGTGATATGGATGTTGGTGAATTTGTTGTCCCTGTACCATATGTAAAGCAAGTGAAGCTTTCCTCAGCTGGA GGTAGGCTTATTATATGCAGTGATGGAGTCTGGGATGCTCTAACTGCAGAAACGGTCCTTGATTGCTGTCGTGGCATGTC AGCAGAGTCTGCAGCACCACAAATTGTGAAAGAATCTTTGCAAGCAAAGGGACTTAGAGATGATACAACCTGCATCGTTG TTGATATATTACCCCAGGAGAAGCCACCTATTTCTGTGCCAATACAAAAGAAACCGGTAAAAGGAATGTTGAAGGCCATT TTTCGGAAAAAGTCCTCTGATTCATCTATGGACAAAGAATACATGGAGCCCGATGAGGTACGGGAACTATATGAGGAAGG ATCTGCTATGCTTTCAGAAAGGTTAGAAACAAAATATCCCCTCTGCAACATGTTCAAGTTGTTTATATGCGCAGTGTGTC AAGTGGAGATTAAACCAGGAGAGGGTATTTCAATACATGAGGGCGCGCCTAACCCCTTAAAATTACGTCCCTGGGATGGA CCTTTCCTTTGCTCGAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAGGAGCATCAGATAGACTTAGCAGCGGAAG TGACTAG
Protein sequence (LotjaGi1g1v0354100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSRSEHHQSVPLSVLLKRELVNEKIEKPEMVIVHGQASENKKGEDFTLLKTECQRAVGDGVSTYSVFGLFDGHNGSGAA IYTKENLLNNVLGAIPPDLNRDEWVAALPRALVAGFVKTDKDFQQRAKTSGTTVTFVIIEGWVITVASVGDSRCILEPSE GGIYYLSADHRLETNEEERIRITSSGGEVGRLNTGGGAEVGPMRCWPGGLCLSRSIGDMDVGEFVVPVPYVKQVKLSSAG GRLIICSDGVWDALTAETVLDCCRGMSAESAAPQIVKESLQAKGLRDDTTCIVVDILPQEKPPISVPIQKKPVKGMLKAI FRKKSSDSSMDKEYMEPDEVRELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHEGAPNPLKLRPWDG PFLCSSCQEKKEAMEGKGASDRLSSGSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 375 | 375 | 7.9E-174 | – | |
| PANTHER | 1 | 375 | 375 | 7.9E-174 | ||
| SMART | 24 | 294 | 271 | 3.0E-54 | ||
| ProSiteProfiles | 25 | 296 | 272 | 32.934 | ||
| Gene3D | 28 | 302 | 275 | 1.5E-54 | ||
| CDD | 41 | 296 | 256 | 2.16073E-60 | ||
| SUPERFAMILY | 41 | 296 | 256 | 3.01E-50 | ||
| SMART | 50 | 296 | 247 | 0.0092 | ||
| Pfam | 57 | 285 | 229 | 1.9E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi1g1v0354100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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