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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0355700 |
| Transcript ID | LotjaGi1g1v0355700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Remorin; TAIR: AT1G45207.3 Remorin family protein; Swiss-Prot: sp|Q7XII4|REM41_ORYSJ Remorin 4.1; TrEMBL-Plants: tr|Q00M66|Q00M66_SOYBN Remorin; Found in the gene: LotjaGi1g1v0355700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:82719072..82723464) extracted from Lotus japonicus Gifu genome v1.2.
GTATTCTTGTTTACAAAATCAAAGCGAATTTGAAAGCGGGAAAGCAAGTTTAGCGGGAAAGTGAGACCCAATGAATTCCA CGGTCAAAGCTAACTAGATTTTCCCTTTTCCTGAATCTAGTGTGCAATAATTAGACAACGAGGAGGAAACAATAGTGTAC TAGTCTTAGTCATACTGTATCCACTACCTTCCTCTTCCCCTCGCTTACCTTTCACCATTGTTTTCCTAATTACAAAACCC AAATTCTGCAAATGCGAGGAAGATAACGAAGCTTAGTTTGACGATGGCGGAGTTAGGGTTTCAGGAGCGAAGCTCGTGGA GGAGGCTTGGTCTAATTCCTCGTGACACCAGCCCCGACTCCGCCGTCTTCACTCTCGAATCCAACCTCAGCCTCTTCTCC TCTGCTTCCGCCTCCGTTGATCGATGCTCATTCGCCTCTGACTCTCACGACCACCACTCTTTCGCCTCTCAACTCTCCCT GGTTCGTATCCCCTATCTTCATCACAATCATCATTAGAAATTGAGTTTCTAAATTAAGAAGAGAATCGAAGAATACTCAT CTGTGATTAGGAATTATGAGATTTGATTTTTTAGTGTTCCAATTAGGATCACGCATGATCGAATCTAAGATTTCAATCGT TTTGCAATCTGTTGCAGCATTTGGCAGGGTATGAGGGTGATTTTGCTCACTGCAGTGGTCCAGATCCAAATCCATACAAA TCTGCACTGCGCGACAACCACAAGCACCGTCGTTTTGCCAGGAACAGCGAAAACGCCAAAGGTAAACTTCATTTTTTGTT TCTATTGAAAAAGTGAAGTTACTAAATTGACAATTTCATGATTGATATTCACATCGCAGTTCAAAACGAAGATAGTGATT TTGACATTGAAGATGAAAGCCAGCAAGTGGAACTGGATTCAGCAAGAAACTCTTTCTCTTTAGCTCTCAAAGGTAAACCC TCTACCACTCCCTACTTTATGCCTTATTTTTATAATCCCTAGTATAATTTATGTTATTGCTTTTTCTTTCTTTGTTCATA AAGAATGCCAAGATAGGAGATCGAGATCTGAAGCCTTGTTAGAGAAGGCTTATGCATTAGATCTGAGCAATACAGCTGCA TCTTCTCCGCGCCTCGGAACGGTGAGGAAGAACACACTTTCTTCTCGAAGGTCTGGTACTGCCACTGCCACTTTCGCCAG TCCCGGAACACCGAATTATCGTGGTGCAATGCAAAAGGGGTGGAGCTCTGAGCGAGTCCCCTTGCATGGAAGTGCTGCCA GGAATCAGGTGGTGTTGCCATTCAGCAATGGAAGAGCATTGCCATCAAAATGGGAAGATGCAGAGAGGTGGATTCTCAGT CCTGTTACCAGAGATGGCATGGGCAGGGCTTCGGTTCAGCAGCCCAACAAGAGGCCGAAGTCCAAGAGCGGGCCGCTCGG TCCCCCTGGTATCGCGTATTATTCAATGTTTTCTCCGGCTGCGCCAATGTGTGAGAGGCGTAACACGGGGAATTTTATGG CAGCTTCTCCATTTTCAGCTGGGGTTCTCTCAGCTGAGGGACTAACAATCCGTTCCGGTGGCCATGGGGGAGCGGTTGCC ACGACTACTGAACCTTGTATGGCTCGATCATCTAGTGTCCATGGATGTTCCGAGATGCTGAATCAGCCATCAGTGCCTGG CCAAGGTTGGGATAAGGTTTACATAAATTCTAATTGCTTGACTTTCCATTTACTTATTTTATTCTGCAAACAACCTGTGA TTATGTATTTGGCCCTTATTACATGGTTGTATGAATGGAATACATGGTTTCTTTGGACACCAATAAGTGGCTGATGGTTG AAATGAAATGGGGTTATAGGCAATTTTTATGTATGAGGGTGTCATCGCAAATATGTATATGATGGTACTCTCTTTATGAT TATGAAACTGGACCTCAAGTTTGCATGCATCTGACCCTGCATTGTTGATGTTGATTTTAACTTACAGAAGATAGGTTTGA TTGCTTCAAAGGGGTGGGAACTGATGTATCTCATGCTGTTTCAAGAAGGGACATGGCAACCCAGATGAGTCCACAGGGTA GCTCAGGCTCCTCTTCTAATTTGAGGCTTTCTTTCTCTGCCTCCACTCCATCTGCCTTGCCTATCACTGAATTGCAGGGT GGTTCTTCTGCTAAAGTGAATATCAGGGATGTGCAGATAGACGAACATGTAACTTTGACAAGGTGGTCCAAGAAAAACAG GGCCATGTTCTCCGGCAGAGCCTCAGAAAATGTTGAAAGTAGGAAAATAAGCGCTCAATCTTCAGCTTGGGACATATCTG AAACATCAAAAACAGACTCAAAGTATGTGTACTTTTGCATAGTGTCAATTTTATTTAATCTATATGGTAAATTAAGGAGA AATTGATTCAAGATAACTTTGCTTTGAGAATCTGAACCAAATGGGGTGATATAAAGGAATTACCATCAAGCAGTGATGTT TTATTTTTGAAGTCAAGTTTTTCACTCCATTATTATCCAATTTCTCTGAACAACACAGAAAATGTAGTAATCCTTTATAG TTCATTGCAGGGCAACAATAATTTGTGTTTGTGAAATTTAATGTGATGCATTAGCTAAGCTATATAATTTTTGTTTGGCC TTGAAATATTTCTGTTAAAAATCTGGAGCTGTCAATAGTCTCTATTACCTTTCAACTATGATTCATGTTGCCCATCCTAG ACAATTCAGTCAATTTGTTTGCAAGAAAATCTTCGCATAAACTTTATATTGTTTGTAAAACGTCAGCTCTTTTTACCCTC TCAGGGCAAAAAGTGAGGAAGCCAAAATCACAGCATGGGAGAACTTGCAGAAGGCAAAAGCTGTGGCAGCAGTTCGGAAA CTAGAGGTAGCTTCGTACTGATTTCTTTATTTGGAGAGTCCAAATAAGGACCTTGTCAAAAATGCTAAGAAGCAAAATGT CCATTGCAATAATTTGAGTTGCTGTTGTCCTTTTATGATAAATATCTTCGTTGAAGTTGTATTTATGGATTCTCTATTCT AGCTATAGCTGTTTGTCCAATAGGATGCCTTAAAAGAATGCATCTTATTTTCATGTGTGTAAAACAAGTTGTCTTTACTG ATTATGCACAAATAAAAGTTATGTGAATCGTACAATTGTTAATTTATTTAGCTGCATACATGCTTTAAAGATTACTTCCA TGTTTGGAGTCCAATAATTTCAAAAAAATGAACAATTGAAGTGCAAAGGGGCTAAAAACAAATGGATGTGACAATTTTTT GTACTTTTTCTATTTCAGATGAAGTTGGAAAAGAGGCGAGCGTCCTCTATGGATAAGATTATGAACAAGCTTAGATTGGC CAAAACAAAAGCCCAAGAAATGAGAAGTTCTGTTTCACCCAACCAAACTGATCAAGTTGTAAGAACTTCTCACAAGGCTT CATCATTTCTTAGAACCAGCCAGATGCGTTCCTTAAGTGGTTGTTTCACTTGCCATGCCTTTTAAACAATATTTTCTGTT TGATCAATGCTGGGTAAGTTTCTCTGTAAACCTTGTCCTGGTTTAGAAATCACTTCTGTAACACTTGGATTTGAACATTT GTTAAAGTAACATGCTCTTCAATACCAATTGTCTGCTTATCTCAGAATTTGAGAAGTTATGATTTTTGTTAATGTGTCTA AGATTTCAGATAAGTTGAAAAGGTTTAAGTTGTTTGTTAATTATACAGGAACTTTTTCAGTCATTAACTTAACTGTCTTT CAAACAGATGTACGCTCTTGCTTCCTTCTGTAACATTCCAGCTCTAGCTTCTTCCTCTTGAGTTTTGATAGCCTAAAAAG GTTTATTACTTCCTTTGCTACTCACCAAAGAAATTGCACGCGATATCCTTGTTCCCATTTTGATTATGGATTTTTACATC CTTGACCAGGCTTGAGAAGGATTTAAATGCCCCCCATGTTAATGAATGAAAGGTGTACAATAGTGAGCAGCTGTGTTGAG ATCAAAATGGGGTCATTGCCATTTTACATTACATGAAATACCAGCATCTTCATTGAAGGTCTCGGATAAAATCTAAGTCC CTAGTGCTGTCACCCTCGGTGGTTGGGATTCAGTGGTTAGCAAAATAACTAGTACTAGGGCAAGTTTTAGAACTAAGTTT TTTTTTCTCCCTACAGGATAAGAATCTATTCAAAACTTCAAAATTCATGTAATCTAATCTATAGGGACAATGAAGGTAAC TTCAAAATTCTGCTACTACTGCAATTTTGTTTTTCTTTCATTTCATTGCAATTTTGATTTTTCTTTCATTTCATTTAATC TTGGCTTAATTCCACTTTGAGCCCCTGATGTTTTCAAAATGTGCGATTGACCCCCCTGTGTTTAAAATGTGCG
CDS sequence (LotjaGi1g1v0355700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAGTTAGGGTTTCAGGAGCGAAGCTCGTGGAGGAGGCTTGGTCTAATTCCTCGTGACACCAGCCCCGACTCCGC CGTCTTCACTCTCGAATCCAACCTCAGCCTCTTCTCCTCTGCTTCCGCCTCCGTTGATCGATGCTCATTCGCCTCTGACT CTCACGACCACCACTCTTTCGCCTCTCAACTCTCCCTGCATTTGGCAGGGTATGAGGGTGATTTTGCTCACTGCAGTGGT CCAGATCCAAATCCATACAAATCTGCACTGCGCGACAACCACAAGCACCGTCGTTTTGCCAGGAACAGCGAAAACGCCAA AGTTCAAAACGAAGATAGTGATTTTGACATTGAAGATGAAAGCCAGCAAGTGGAACTGGATTCAGCAAGAAACTCTTTCT CTTTAGCTCTCAAAGAATGCCAAGATAGGAGATCGAGATCTGAAGCCTTGTTAGAGAAGGCTTATGCATTAGATCTGAGC AATACAGCTGCATCTTCTCCGCGCCTCGGAACGGTGAGGAAGAACACACTTTCTTCTCGAAGGTCTGGTACTGCCACTGC CACTTTCGCCAGTCCCGGAACACCGAATTATCGTGGTGCAATGCAAAAGGGGTGGAGCTCTGAGCGAGTCCCCTTGCATG GAAGTGCTGCCAGGAATCAGGTGGTGTTGCCATTCAGCAATGGAAGAGCATTGCCATCAAAATGGGAAGATGCAGAGAGG TGGATTCTCAGTCCTGTTACCAGAGATGGCATGGGCAGGGCTTCGGTTCAGCAGCCCAACAAGAGGCCGAAGTCCAAGAG CGGGCCGCTCGGTCCCCCTGGTATCGCGTATTATTCAATGTTTTCTCCGGCTGCGCCAATGTGTGAGAGGCGTAACACGG GGAATTTTATGGCAGCTTCTCCATTTTCAGCTGGGGTTCTCTCAGCTGAGGGACTAACAATCCGTTCCGGTGGCCATGGG GGAGCGGTTGCCACGACTACTGAACCTTGTATGGCTCGATCATCTAGTGTCCATGGATGTTCCGAGATGCTGAATCAGCC ATCAGTGCCTGGCCAAGAAGATAGGTTTGATTGCTTCAAAGGGGTGGGAACTGATGTATCTCATGCTGTTTCAAGAAGGG ACATGGCAACCCAGATGAGTCCACAGGGTAGCTCAGGCTCCTCTTCTAATTTGAGGCTTTCTTTCTCTGCCTCCACTCCA TCTGCCTTGCCTATCACTGAATTGCAGGGTGGTTCTTCTGCTAAAGTGAATATCAGGGATGTGCAGATAGACGAACATGT AACTTTGACAAGGTGGTCCAAGAAAAACAGGGCCATGTTCTCCGGCAGAGCCTCAGAAAATGTTGAAAGTAGGAAAATAA GCGCTCAATCTTCAGCTTGGGACATATCTGAAACATCAAAAACAGACTCAAAGGCAAAAAGTGAGGAAGCCAAAATCACA GCATGGGAGAACTTGCAGAAGGCAAAAGCTGTGGCAGCAGTTCGGAAACTAGAGATGAAGTTGGAAAAGAGGCGAGCGTC CTCTATGGATAAGATTATGAACAAGCTTAGATTGGCCAAAACAAAAGCCCAAGAAATGAGAAGTTCTGTTTCACCCAACC AAACTGATCAAGTTGTAAGAACTTCTCACAAGGCTTCATCATTTCTTAGAACCAGCCAGATGCGTTCCTTAAGTGGTTGT TTCACTTGCCATGCCTTTTAA
Protein sequence (LotjaGi1g1v0355700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAELGFQERSSWRRLGLIPRDTSPDSAVFTLESNLSLFSSASASVDRCSFASDSHDHHSFASQLSLHLAGYEGDFAHCSG PDPNPYKSALRDNHKHRRFARNSENAKVQNEDSDFDIEDESQQVELDSARNSFSLALKECQDRRSRSEALLEKAYALDLS NTAASSPRLGTVRKNTLSSRRSGTATATFASPGTPNYRGAMQKGWSSERVPLHGSAARNQVVLPFSNGRALPSKWEDAER WILSPVTRDGMGRASVQQPNKRPKSKSGPLGPPGIAYYSMFSPAAPMCERRNTGNFMAASPFSAGVLSAEGLTIRSGGHG GAVATTTEPCMARSSSVHGCSEMLNQPSVPGQEDRFDCFKGVGTDVSHAVSRRDMATQMSPQGSSGSSSNLRLSFSASTP SALPITELQGGSSAKVNIRDVQIDEHVTLTRWSKKNRAMFSGRASENVESRKISAQSSAWDISETSKTDSKAKSEEAKIT AWENLQKAKAVAAVRKLEMKLEKRRASSMDKIMNKLRLAKTKAQEMRSSVSPNQTDQVVRTSHKASSFLRTSQMRSLSGC FTCHAF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 76 | 563 | 488 | 5.1E-177 | – | |
| PANTHER | 76 | 563 | 488 | 5.1E-177 | – | |
| MobiDBLite | 100 | 121 | 22 | - | – | |
| MobiDBLite | 172 | 195 | 24 | - | – | |
| MobiDBLite | 172 | 201 | 30 | - | – | |
| MobiDBLite | 249 | 272 | 24 | - | – | |
| MobiDBLite | 372 | 393 | 22 | - | – | |
| Pfam | 453 | 556 | 104 | 2.6E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0355700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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