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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0357700 |
Transcript ID | LotjaGi1g1v0357700.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Serine/threonine-protein kinase WNK-related; TAIR: AT1G60060.1 Serine/threonine-protein kinase WNK (With No Lysine)-like protein; Swiss-Prot: sp|P0C7P8|LHWL1_ARATH Transcription factor EMB1444; TrEMBL-Plants: tr|I1K821|I1K821_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0357700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:83148902..83151565) extracted from Lotus japonicus Gifu genome v1.2.
GGAAGAAACGGTCAACTATTCATTACGCAGCCTAATTAGAGGGAACTAAACATTAGAAGAGGATCATATCAGATGAAAAG TGATAAGAGGAAGAAACATCTCATGGATAAGCTTTTCAAGTTTTGCTTTCCTGCATTACATTACTAACCATGTAATGAGA ACACCAAACTCCTAATCAACTCAGTTTTTTGGATCTTTGAAGTTATAAATGCCTTCACCAGTAACCAAAGTGGAAAGGGA AATGTGAGTGTTCAGGTCCCACTGTGAAATTGCAACAACTCGTTGTCTGGTTACAACCCTTTGGTGTTGGAACACGATCA CCTCACGTAGGTGGCAGCGAAAGACTAGTGGGAACCATCACTTTGTTTTTTGCATTTTTGCCTTTAAAATTCCAATCTTT GCTTCACCCTCTTCGGTTCACCGCTGAAGACAATGGAAAATGGACTACCTTTGCTTAATTGTCTCTTGCAGCAGACTCTG AGAACCATTTGCACTTCTCCAAATTTTTCCACTTCCTCTAAGTGGGTATATGCTGTCTTCTGGAGAATACTACCCCGGAA CTTTCCTCCACCGAGGTAAGTAACCAATGTACATGTTTGGATACGCAGCCATTGTGAGCCAAAATCACGGTAAACTAAAG TAATTTCTCTTAATTTTTGTAGCTGTTCACTATGATTTTGGTTTCAACGTGTTTTTCCGCCGTGTATCAAATGCAGAATG TATCAGGAGAAAACAAATGATTTTATTTGCAAAAGAAAGGAACTTTTGGCTTCATGTTGATGTTTGTACAGTGTTGATGT ACTTTGTTGCAGGTGGGAATTTGGAGGAACTGCTCTTGATCGCTCCAAGGGAAATAAGAGAAACTGGTAATTTTTTCTGC AAACTATGACAAACTCATGTCTCATTTGAGTTTGTTTCTTTTAACCAACAAAAAAGAGGATAATTTTCTTGTTCAGGATC CTTGTCTGGGAAGATGGGTTCTGTGATTTTGATGAATGTGAGCAGAGGAGGAGTGGATACTTGAACAGCAGGTTTGGCGC GGATGTATTCTTCAAAATGTCTCATGAGGTTTACAGTTATGGAGAGGGGTGAGAGTTGTTATAAGTACCTTCACATTTTC TTTCCATAAGAAGATTCATTTTCTTTTCCTATGTTCTTTTCAAAAGTAGCATTACAAGAGGGACAAATGAATCCATCATT TGTATATCTCTGCAGACTATTGGGAAAAGTTGCTGCAGATACTAGTCACAAATGGGTTTACAATGACCAGCACAGTGAGT GTGAACCTAGCTACATTGCTTCTTGGAATGCTTCAGTGGAGCCAGTAAGAGAAGTTGCTATAATTAACAGAAGTGATTGT TAAACAGTTCTTCACATTTTGTCTTAATGCTTACTTCTTTTTCATTCCACTTTTGTTGACACTACACAGCAACCAAAAGC GTGGGAGTTTCAGTTCAACTCAGGCATTCAGGTTGGTAAATTCATTCATAAACATGTTGTAAAAATTGAAGAGCTAATAT CTGAAACTTCCAGAAAATTAATTTCACTAATGCTAACAAAGTCATCATTCATTTTGGCAAGAGTATTGTCCTGATTGCTG TTAGAGAAGGTGTAGTGCAACTGGGTTCCTTTAACAAGGTATTGCACTTTTTTCCTTTATAATCACCGAGATATCAAGTC TGTTTAGATACGGATTAAAGGGCACTTATTGAAGCTTATCTACTAGAAAAAAAGATTGGATAAGCTCCTATAAGTGTTAT TTGATCAACATTCAAACGAGTTGATAATATCTTAAATTACATATCAGATATATTTACTGATCTGGGTAGAGATATAGTTT CTCTTACACCCAGATTCTCCTATATCTTCCTTAACGTTTCTCAGCTCTTCCTAAATCTCGATCATTGTTGATTCTGGGAT TCCTTAGATTGCAGAGGACCTCAATCTAGTGATCAGCATACAAAGGAAATTCAGCTACCTTCAAAGCATACCAGGTGTAT TCGCTATTCAAAGACCATACCTACCCACCCAATATCCATACATTTTGAAGCCCAGTTTCCAAATGATTGAAGGCAATGGC ATTGCTCTATCTACCTATGATTTGAACCAAGTAAATGGAGTCAACAAACAAATTGATGAAAAACCCAACTGTACTTCTAG TTTAGCTATAAACTTGGGTTGCAACATTGGAACAGCAGAATCTCTTCCTTTCCTCAATACCATGATGCCTTGCAGCCTTG GATCTCTACTATCAAAGCTACCCTCAACACTCCCATCACAAAATTCCACTCAAGTCCCTGATGCAGGGATGTTAAGCACC GGGGAGAGAGTGAAGATTGAGGACTGTCATGAATTTCATCCTACCTATGATGTTGATCAGAAAGGTAAGGTTGTTTCCCT GAACAAGCAGGAACTTTAACCATAATGGCTCTTGATTATAGTAGCTAGTCTGATAATGGAATTAATGGCTGGTTAAATTA TCCCACTGGACACTGCTCAGCTTAGCAAATTGTGTGGTATGTTTATTGGTGGCCGACAATTTATCAATCATGGCCTTGTA CTATTGCTGTTTTCTTTCTGTGCATTTATGCTGCTACAGATCAATGCAATGCTGCCATGCATTTATGAATACTCTTTGGA CTTCACATATAACTAATAGCATCG
CDS sequence (LotjaGi1g1v0357700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAATGGACTACCTTTGCTTAATTGTCTCTTGCAGCAGACTCTGAGAACCATTTGCACTTCTCCAAATTTTTCCAC TTCCTCTAAGTGGGTATATGCTGTCTTCTGGAGAATACTACCCCGGAACTTTCCTCCACCGAGGTGGGAATTTGGAGGAA CTGCTCTTGATCGCTCCAAGGGAAATAAGAGAAACTGGATCCTTGTCTGGGAAGATGGGTTCTGTGATTTTGATGAATGT GAGCAGAGGAGGAGTGGATACTTGAACAGCAGGTTTGGCGCGGATGTATTCTTCAAAATGTCTCATGAGGTTTACAGTTA TGGAGAGGGACTATTGGGAAAAGTTGCTGCAGATACTAGTCACAAATGGGTTTACAATGACCAGCACAGTGAGTGTGAAC CTAGCTACATTGCTTCTTGGAATGCTTCAGTGGAGCCACAACCAAAAGCGTGGGAGTTTCAGTTCAACTCAGGCATTCAG AGTATTGTCCTGATTGCTGTTAGAGAAGGTGTAGTGCAACTGGGTTCCTTTAACAAGATTGCAGAGGACCTCAATCTAGT GATCAGCATACAAAGGAAATTCAGCTACCTTCAAAGCATACCAGGTGTATTCGCTATTCAAAGACCATACCTACCCACCC AATATCCATACATTTTGAAGCCCAGTTTCCAAATGATTGAAGGCAATGGCATTGCTCTATCTACCTATGATTTGAACCAA GTAAATGGAGTCAACAAACAAATTGATGAAAAACCCAACTGTACTTCTAGTTTAGCTATAAACTTGGGTTGCAACATTGG AACAGCAGAATCTCTTCCTTTCCTCAATACCATGATGCCTTGCAGCCTTGGATCTCTACTATCAAAGCTACCCTCAACAC TCCCATCACAAAATTCCACTCAAGTCCCTGATGCAGGGATGTTAAGCACCGGGGAGAGAGTGAAGATTGAGGACTGTCAT GAATTTCATCCTACCTATGATGTTGATCAGAAAGGTAAGGTTGTTTCCCTGAACAAGCAGGAACTTTAA
Protein sequence (LotjaGi1g1v0357700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENGLPLLNCLLQQTLRTICTSPNFSTSSKWVYAVFWRILPRNFPPPRWEFGGTALDRSKGNKRNWILVWEDGFCDFDEC EQRRSGYLNSRFGADVFFKMSHEVYSYGEGLLGKVAADTSHKWVYNDQHSECEPSYIASWNASVEPQPKAWEFQFNSGIQ SIVLIAVREGVVQLGSFNKIAEDLNLVISIQRKFSYLQSIPGVFAIQRPYLPTQYPYILKPSFQMIEGNGIALSTYDLNQ VNGVNKQIDEKPNCTSSLAINLGCNIGTAESLPFLNTMMPCSLGSLLSKLPSTLPSQNSTQVPDAGMLSTGERVKIEDCH EFHPTYDVDQKGKVVSLNKQEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 339 | 339 | 3.1E-168 | – | |
PANTHER | 1 | 339 | 339 | 3.1E-168 | – | |
Pfam | 12 | 194 | 183 | 1.2E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0357700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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