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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0357700 |
| Transcript ID | LotjaGi1g1v0357700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase WNK-related; TAIR: AT1G60060.1 Serine/threonine-protein kinase WNK (With No Lysine)-like protein; Swiss-Prot: sp|P0C7P8|LHWL1_ARATH Transcription factor EMB1444; TrEMBL-Plants: tr|I1K821|I1K821_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0357700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:83148904..83151304) extracted from Lotus japonicus Gifu genome v1.2.
CTGTGAAATTGCAACAACTCGTTGTCTGGTTACAACCCTTTGGTGTTGGAACACGATCACCTCACGTAGGTGGCAGCGAA AGACTAGTGGGAACCATCACTTTGTTTTTTGCATTTTTGCCTTTAAAATTCCAATCTTTGCTTCACCCTCTTCGGTTCAC CGCTGAAGACAATGGAAAATGGACTACCTTTGCTTAATTGTCTCTTGCAGCAGACTCTGAGAACCATTTGCACTTCTCCA AATTTTTCCACTTCCTCTAAGTGGGTATATGCTGTCTTCTGGAGAATACTACCCCGGAACTTTCCTCCACCGAGGTAAGT AACCAATGTACATGTTTGGATACGCAGCCATTGTGAGCCAAAATCACGGTAAACTAAAGTAATTTCTCTTAATTTTTGTA GCTGTTCACTATGATTTTGGTTTCAACGTGTTTTTCCGCCGTGTATCAAATGCAGAATGTATCAGGAGAAAACAAATGAT TTTATTTGCAAAAGAAAGGAACTTTTGGCTTCATGTTGATGTTTGTACAGTGTTGATGTACTTTGTTGCAGGTGGGAATT TGGAGGAACTGCTCTTGATCGCTCCAAGGGAAATAAGAGAAACTGGTAATTTTTTCTGCAAACTATGACAAACTCATGTC TCATTTGAGTTTGTTTCTTTTAACCAACAAAAAAGAGGATAATTTTCTTGTTCAGGATCCTTGTCTGGGAAGATGGGTTC TGTGATTTTGATGAATGTGAGCAGAGGAGGAGTGGATACTTGAACAGCAGGTTTGGCGCGGATGTATTCTTCAAAATGTC TCATGAGGTTTACAGTTATGGAGAGGGGTGAGAGTTGTTATAAGTACCTTCACATTTTCTTTCCATAAGAAGATTCATTT TCTTTTCCTATGTTCTTTTCAAAAGTAGCATTACAAGAGGGACAAATGAATCCATCATTTGTATATCTCTGCAGACTATT GGGAAAAGTTGCTGCAGATACTAGTCACAAATGGGTTTACAATGACCAGCACAGTGAGTGTGAACCTAGCTACATTGCTT CTTGGAATGCTTCAGTGGAGCCAGTAAGAGAAGTTGCTATAATTAACAGAAGTGATTGTTAAACAGTTCTTCACATTTTG TCTTAATGCTTACTTCTTTTTCATTCCACTTTTGTTGACACTACACAGCAACCAAAAGCGTGGGAGTTTCAGTTCAACTC AGGCATTCAGGTTGGTAAATTCATTCATAAACATGTTGTAAAAATTGAAGAGCTAATATCTGAAACTTCCAGAAAATTAA TTTCACTAATGCTAACAAAGTCATCATTCATTTTGGCAAGAGTATTGTCCTGATTGCTGTTAGAGAAGGTGTAGTGCAAC TGGGTTCCTTTAACAAGGTATTGCACTTTTTTCCTTTATAATCACCGAGATATCAAGTCTGTTTAGATACGGATTAAAGG GCACTTATTGAAGCTTATCTACTAGAAAAAAAGATTGGATAAGCTCCTATAAGTGTTATTTGATCAACATTCAAACGAGT TGATAATATCTTAAATTACATATCAGATATATTTACTGATCTGGGTAGAGATATAGTTTCTCTTACACCCAGATTCTCCT ATATCTTCCTTAACGTTTCTCAGCTCTTCCTAAATCTCGATCATTGTTGATTCTGGGATTCCTTAGATTGCAGAGGACCT CAATCTAGTGATCAGCATACAAAGGAAATTCAGCTACCTTCAAAGCATACCAGGTGTATTCGCTATTCAAAGACCATACC TACCCACCCAATATCCATACATTTTGAAGCCCAGTTTCCAAATGATTGAAGGCAATGGCATTGCTCTATCTACCTATGAT TTGAACCAAGTAAATGGAGTCAACAAACAAATTGATGAAAAACCCAACTGTACTTCTAGTTTAGCTATAAACTTGGGTTG CAACATTGGAACAGCAGAATCTCTTCCTTTCCTCAATACCATGATGCCTTGCAGCCTTGGATCTCTACTATCAAAGCTAC CCTCAACACTCCCATCACAAAATTCCACTCAAGTCCCTGATGCAGGGATGTTAAGCACCGGGGAGAGAGTGAAGATTGAG GACTGTCATGAATTTCATCCTACCTATGATGTTGATCAGAAAGGTAAGGTTGTTTCCCTGAACAAGCAGGAACTTTAACC ATAATGGCTCTTGATTATAGTAGCTAGTCTGATAATGGAATTAATGGCTGGTTAAATTATCCCACTGGACACTGCTCAGC TTAGCAAATTGTGTGGTATGTTTATTGGTGGCCGACAATTTATCAATCATGGCCTTGTACTATTGCTGTTTTCTTTCTGT GCATTTATGCTGCTACAGATCAATGCAATGCTGCCATGCATTTATGAATACTCTTTGGACTTCACATATAACTAATAGCA T
CDS sequence (LotjaGi1g1v0357700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAATGGACTACCTTTGCTTAATTGTCTCTTGCAGCAGACTCTGAGAACCATTTGCACTTCTCCAAATTTTTCCAC TTCCTCTAAGTGGGTATATGCTGTCTTCTGGAGAATACTACCCCGGAACTTTCCTCCACCGAGTGTTGATGTACTTTGTT GCAGGTGGGAATTTGGAGGAACTGCTCTTGATCGCTCCAAGGGAAATAAGAGAAACTGGATCCTTGTCTGGGAAGATGGG TTCTGTGATTTTGATGAATGTGAGCAGAGGAGGAGTGGATACTTGAACAGCAGGTTTGGCGCGGATGTATTCTTCAAAAT GTCTCATGAGGTTTACAGTTATGGAGAGGGACTATTGGGAAAAGTTGCTGCAGATACTAGTCACAAATGGGTTTACAATG ACCAGCACAGTGAGTGTGAACCTAGCTACATTGCTTCTTGGAATGCTTCAGTGGAGCCACAACCAAAAGCGTGGGAGTTT CAGTTCAACTCAGGCATTCAGAGTATTGTCCTGATTGCTGTTAGAGAAGGTGTAGTGCAACTGGGTTCCTTTAACAAGAT TGCAGAGGACCTCAATCTAGTGATCAGCATACAAAGGAAATTCAGCTACCTTCAAAGCATACCAGGTGTATTCGCTATTC AAAGACCATACCTACCCACCCAATATCCATACATTTTGAAGCCCAGTTTCCAAATGATTGAAGGCAATGGCATTGCTCTA TCTACCTATGATTTGAACCAAGTAAATGGAGTCAACAAACAAATTGATGAAAAACCCAACTGTACTTCTAGTTTAGCTAT AAACTTGGGTTGCAACATTGGAACAGCAGAATCTCTTCCTTTCCTCAATACCATGATGCCTTGCAGCCTTGGATCTCTAC TATCAAAGCTACCCTCAACACTCCCATCACAAAATTCCACTCAAGTCCCTGATGCAGGGATGTTAAGCACCGGGGAGAGA GTGAAGATTGAGGACTGTCATGAATTTCATCCTACCTATGATGTTGATCAGAAAGGTAAGGTTGTTTCCCTGAACAAGCA GGAACTTTAA
Protein sequence (LotjaGi1g1v0357700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENGLPLLNCLLQQTLRTICTSPNFSTSSKWVYAVFWRILPRNFPPPSVDVLCCRWEFGGTALDRSKGNKRNWILVWEDG FCDFDECEQRRSGYLNSRFGADVFFKMSHEVYSYGEGLLGKVAADTSHKWVYNDQHSECEPSYIASWNASVEPQPKAWEF QFNSGIQSIVLIAVREGVVQLGSFNKIAEDLNLVISIQRKFSYLQSIPGVFAIQRPYLPTQYPYILKPSFQMIEGNGIAL STYDLNQVNGVNKQIDEKPNCTSSLAINLGCNIGTAESLPFLNTMMPCSLGSLLSKLPSTLPSQNSTQVPDAGMLSTGER VKIEDCHEFHPTYDVDQKGKVVSLNKQEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 346 | 346 | 2.4E-164 | – | |
| PANTHER | 1 | 346 | 346 | 2.4E-164 | – | |
| Pfam | 12 | 201 | 190 | 5.4E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0357700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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