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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0361000 |
| Transcript ID | LotjaGi1g1v0361000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Activating signal cointegrator 1 complex subunit 2; TAIR: AT1G27752.2 Ubiquitin system component Cue protein; Swiss-Prot: sp|Q9H1I8|ASCC2_HUMAN Activating signal cointegrator 1 complex subunit 2; TrEMBL-Plants: tr|A0A151TTU0|A0A151TTU0_CAJCA Activating signal cointegrator 1 complex subunit 2; Found in the gene: LotjaGi1g1v0361000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:83586334..83593714) extracted from Lotus japonicus Gifu genome v1.2.
CTCTTTTGTAAAATTTTCCAGCATCCACTAACCCAACCCTGGCTTGAGGTGCCATTGATTGAGTGTGTGTCGCTTTTCCT TCTTCATAGATAGCAATTACGTATTCGACAACACTTGTTGATCGTTTCTGTTTCTGATAACAATGTCGAATCGATTCAGT CAAGGAAGGCAAGACACTAGTACCAACAACAACAACAACAAGGGTTTCAACAAATCACACAAGAAATTTCTCCCCAAAAA CCCCAACCCGAAACCAACCCTTTCAGCTTCCCTCAGAGAATCTGGTTCCGGTAGCAGTAGCGGTAATCCGTCAGGTAGCG ACGTTGGCAATGGCAATTTCGTCAAATACTTGCCGCAAGACGAGGCTGTGGCAGCTGGTCTTGGCGCTGAGGATGGCGGT TTGGATCCCATCGAATCTCAGAGAGTCGTTGATCTTCTCAATTCTGAGTTGTCTCGGTTGCTCAAGTTGAAACCTAAAGA ATTCTGGAAACAAGGTTTGCACTCCAATTCACTGTATCATATTCATGCTAAAAACTGCTTTTGATTCTGCATAACATGCA CTGTTAGAATATCTGGAGTCTTTGTGTTGTTGTTATCATGTTTTGGTTATCGAATTCTATTTCTATTGTATTTGCAGTGG CTGCTGACACCTCCTTGCATGCGTTTCTGGATAGCTTCTTGCAATTTAGGAGCAGGTGGTATGATTTCCCTCACCGTGGG GTTAAAGGGATTCTTGCAGGTGTTATTGTTGGAGAGATTGATTTGAGTCGCCGCGTGTTCATGGTATTGTATCGAATGTA AGTTTTTTTATAAGGTGGCATGAACTTGGAAGTTGGAATACACTGATTTGTACTCTATTTGGTTTAATCTTCCATGACTT ATAATGCCGTGCCATGTATCTTGCAGTTCTTCCAATAAAGATCCTGGTGGTCGGCCTGCTGATACACTCAGTTCTAGAGA CCATGGAGGTGTGATCTCCCTTATCCTTTTTCTAGTTTGTTGACAATTAAACTCATTTTAGCAGAGCATACAATGCACGG TGTTTACTTCATTTCGCCGCCTTGAAAGGACGCATACGACACGTGAACTGATATAAAGCACATAAAAGTAGTACTATAAA TTAATAGAAAAACACACATGTTAAAGTAGAATAACAAATCCATATTCTAGAAGTTAGAATGAGGTATTATATAGTTTTGA CACAATAAAATTATATTCTTTATCTAATTATTGTGATATTCCCATATGTATTGGTAAGTTTTCAATAAAAAAAAGTAAAA AAAGTGAAATATCAGTAAAAGTGTCCATGAAATGTTACGTGTCCGAAACGGTTATGACACGATACAGATATGCCACATAC GGTTACTACTTTGAAGCAGTGTTGTCAAATAGCAGATATCGCGGCGCTATAACGTAGCGCTCTGAGGGCTCACCGCTATC CCTATTTGCCACTATTTTTTGCTCTGAGGGCTTGATGTAGTGGATTTTTGGCTTTCTGCAATCCACGATTAACAACATTG CTTTGAAGTCTCCGTGCTTACTTGGCCGCCTTTATATGGTTTTGTTGTAATTTATTACTTGTATCTAGCAAATACTGCTC ACCTTTATGTTGTGCGCATCTGTGGGCTCCATTTAATCTTAGTGTAGCCAGAGATTGGAACTTTTTTTTCCTGGTTTATT ATTTTTTTAATTTTTTTGATCATCCCTTGGAATTAAGCTTTGCACTTACCATTAATTTTACTGACATGTTAGAAATCACG GGCTTGTCGTCTATAAAACTTGTCAGTCTCAGGCAACGGGGGCAATTAATTCTTAAAATGTGCTTTGGGCATGTTGCATC TTTAACTAGTAGTTTCTGTGATTGATAGAGTATAATAATATAACATCTCACATTTACTGATGTATTGTTTGGGAAAATTA TTCATGTTGGGCAGTTACCTTGTATTTTGTTTATGTATACGGATTCACTGTTGTTCACTAATATTGCCTGTAGTTCTTTT GCAGGAGAAGAAGTTGCTTGAACTGCCGAAGTTGTTAGATATATGTGCCATATACTATCATGAAAATGAAGAATTGACAA GATTGCTGGTAAGCATATGTAATTTTTAGAGGATCATTAATAACTTAGCATCCCTTAACGGCAGTGTATATTCTTATATT GCTTTAGGCATCATTAGGTTCAATAAATATAGCTTTTAAGAAGAATTATCTCGGAGGTGATGGTTTTTCCTTCACAATTT TCTATATTAAGATTAAAAAACACTTCTATACTACTGTTCCTTTAAGGTGCATTTAACTTGTCTTTCTTACTTTTCTCTCT TACTCACTTACATCTTTCAGGTTAGAAATGCTTTGAGTGCTCAGCCTTGGATCCATAATAGTTTGCCTTCAGTAATATCC CATTTTATGGGTATTGTCAGCACAATGCACGAACGTTGCAGTTCTTCATTGGAGGTATTCTTGTAATTTGACTGAGCATA AATGTGATATATCTATGAGTTTTTTTTTACTGTCTTTAACTAAGCAAGTCAAGTCTATTTGAGAGTTTTGGTCGAGTTGA GTCATATTATTAGGTAATTTGATAAGTATAATTTTGGTTTTCAACGAACTGCTTTAGTCCATAATACTTGCATAAAGTCA CTTGATGGGCATCTTCTCTATATTTCAGTCCTTTTCATTTATTTGTTTGGGTTTTGTTTTCATATTTCTCGCCGAACAAT GAAATAGAAATGGATTGCATATTTAATTTTTTGTGATCCATATAACCCATTAGGATGTGAAAGTAGAAAGGCCAACCACA ATTTTGATTTGCTTTCTGTTAGAGTAATATGGAGTCCTTATTTAGTTATCCTATGCCAAAAAGTGGCTACTCTTTATTGT TAGAATTCACACTTCCAATACAAGTATAGTGTGCAAAAAGATATTTCAGGACAGGCCCATGTTCTGTTTGGTGATATGTG CTAAAGGAAACTTATATAGAAGATGTGTATAGCTTACAGTATCTGTATTGTTTGGACTTATGTATAGAACATACATCTTT TGGTCTTATAAAATATTAATTATTAATTCGCATTCCCTGTCTTAGAGCTAGAATAATTGACCATGTAAAAGTATGAATCC TGGTCGTTTTTATTCTTTACATTCCATTTGAACTTCCTTTTGGCATATGTTATGTCTGATGACCTTATTTCTCTCGTTTC CATAAATTATTTGACTTGTTTATAATGAATAAATGCATAAAAAAATCTTTAAAATAATTATTTATAATTTACTGAATCAT GAAAGAAAGTTTGTATGTATATTTATTGTATAAAGAAAAAGTTCTGATAAAAACTAAAATTTTCTTTTATACAGGTCTTA TTTTCTTCTGGAAGTCCTGATAACCAGAATGCAACTTTTCTTCAAGCTGATCTACTGGAGGCAAGTTGCTTCATATTTTT TTCTCTTGGTAAATGAGTTGCGACTCAGTTTATGCATTTCCCGGTATGCATTTGGGTACTTGTGGGTACGCACCTATTTA CCATAATAATTCTTCAAACAAACAATTTTTTGTACTTGTTGAATACTTCTTGGATACAGGCAATACCCCTACCTGCATAA TATTTATAAAAAATCTTGTTTCACGTACCTGGTAACGGTACTGGTACTTTATCCATTTAACATAGGACATAATCTTCTAT TATGAGGTGAGGGATCAACCAGATATCGCAAGCTTCAAATCATTTATCTGTAAGTTTAATTTTCTTTGACCACGGAGAAG TGAATTGCTTAGCCTAGATTATAGAATAACCACCCATTCATTCCCAACCAGGTACTCTTGATCATATGGCTAGGTACTAG TCTCAGCCATCTCTTTAACCTTAACCTGTCCAGCTATCGCAGGCATAATTCAGCTATGCCTGGACATTAGAAATGCTGCA GAGAACTTTGAATATATGGCACCTACTGCATATCAATTGATTTATAATATCTTTGCTACCTCACCTATACAACCCAATTT CCGCGCACAGATTTTTTATGGACAATAACTACTGCCTATACTTCAAGGCTATTCAAAGTAGAATTTCGCTGCATGCCAGG GGAATGTGTATTGGCTCTGCCATAGTTTCTTTAAATACGTAGCATTTAGATTATTCACATTGTAAGATGTTGTTGAGCCT AAATTTATCTAGTTCTTTGACATATGCAGCACAATATTGATGCTATCTGTTTTTTTGGATAGGTGATGGACTTTATAAAT GATGCAATCGTATCATTGGATGCTTTTGTTAATACATTCGAACCAGCAGCTGTATTCTTCTCTTGTCCAGTGGAAATGAG GTATCTGATTGATGAAATCTTGCTTTTTATATTGAGTAAAGGCTGAATGCAATATATTTTTACAGTAAAAATATGGCTTA TTATAAATCCAGTCTAGCATTCATATAAGATTTACATGATTGATTTATCCCAACAGAAACTATGATTAAGATTGGCATTT GAAAGCAATTCTAGAAAAAATGACATTTTGTTGGTCTATATAATTGTAGCTATGGGAATGAGGAACTGCTAAGTCTCCTT GCCCGATTGCATGATTCGCTAATTCCATCCTTGCAAAAGGGATTCCAAATCATTTTTGCTGACAAACAAGATGACAGAGT GTCTAATACCTTGGTTAGTTTGAAGATGTTGAGAATAAGATTGGTGAACTTTGGGTGGCAACTTTTGCACTTCTGCTATC TAAGTGATGAAGTGTTCAGAGATAGCATCCCCCTTGCTGCGGTCACGAAGATGTTTCCTGCCAATGTAGAGGACCCAGTC ATCAGAGCTGATATTCTGGTTCAAACACTTAGAGAGATCAATTCAGTATCATTATGTTTTCAGGAAATCCTCCCGAAGAA AACATTTCTTCAAGATGTTGAAAGGAACTTCAATTTATTAAGCAGGATTGAGAGATTAAAGGATAATGGTAATTATCTTA TATGCTAAATAACACAAGTCACTTGCATATGCTTGTATGAATATAAACATACATTACTAGGATTACTATGAGTTTTGGCA AAATGCTTGATCTAGTTAAACTTTTTAGAGGGATAATGTTTTTATCCCTTCTAAATATAAGGTGAAATTAGACCTCTCTG ACCCTTCAAAACTATATTTTAACTTTTTGCAATTTTTATAGTGTGGCATATTACTTTTCTAATCTGGTTTCTCTGATTCA GGATGGATATTCATGGATGATGAACAGTTTCAATATATATCTGGGATTTTGAGTTCTCCAAAAGAGATTTCTAAGGAGTC AAGTTCTACAATGACCACTGTGCCGAACCAAGCATTGCGGATGGATGAAGATGCGGCTATTATAGAGTCAAAGATCAGTC AAATTAGGGACCTGTTCCCTGATTATGGTAAAGGGTTCTTAGCTGCCTGTCTCGAGGTTTATGACCAGAATCCAGAAGAG GTTATTCAAAGAATTTTAGAGGATACCCTTCATGAAGATCTGCGGTGCTTGGATACTTCTCTAGAGACAGTTCCACAGTC ATTAGCCAAGACCACCACTGTGAGCAGAATTGATAAAGGAAAAGGTAAATTAATTGATTCTACGTCAGTGTCCTCAAATA CAGTTGTTGTTAGTGGGAAGCAACAGACAGAAGCGCCATTGATGCCATCCTCTGCTCCGCTAGGGAAATTTATTAGGAAA TCTAGAGCTGATGCGCCTCCTGATCTCAGTATTTTGGATAAAAAGGATGAGAAAGATGTATTGAAAACCGCTATGCTTTC ACAATATGAATATGATGATGAGTATGATGACTCTTTTGATGACTTGGGTCTAAGCGTGGGGGACTCTGGATTAGAAGAAA ATGAAATACTCGGTGACAAAATGAATGCAATGCCCCAATCTTGGGCAAAAGAAACTGGAAACTCCGGCCAAAATGCCCCT AATGCAAAATGGGGCTCCAAGAAAAAGCCACAGTTCTATGTCAAGGATGGTAAAAATTACAGCTACAAAGTGGCAGGTGC AACAGCAGTTGCAAATTCTGATGAGGCTTCATTACTTAATCAAGCTCAGAAAGAATTAATACATGGTCTTGGACGTGGCG GCAACCATCCTTTTGGTGCGGTGAGGAAGTTCACAGAATTCAAGGATAATGATAACCAGTCCCATGTTTCTGAAACAGAA GGCAGAGGGGTTTTGGGCAATCCTAGAAATAGGGGAAGGAATGAAGGGGGAAAACAAACTGAACCTCATCAACCACAGGA GACACAGTCTAATGGTTCTGAGATGGAAGGACAAGATCATGTTTCAAATAACAGGGGCAGAGGGAGAGGCAGAGGGAGGG GAGGTGGAAGAAGCAACCATTACAGGAAAGACCAAGCCATGAAGAAGCATTTCTCTGGATTGGGTGGTTTTTAAGTACAT AAGCGAATCAACATACATACATTTCATACTTGTCGAGTTACCATACATCTGCATGTGGTCGGTAACCTTTTGGCTAGTGT CTCTACATGTGAAACCCAATTTTTGGCAGCATTGGAGTTCAATGTGGTGCATCAGAGTGCATAAAACCCTTGTCTACAGC CCTTGAGAAACATGGATCATAAACCTCAAGATATGATGCGGTTGGGGGATTCAAAAACCCTTTATATTGTGGTCCCAATT TAAAACTGCAGCTAGTAATATACAACAGATACATTCATGTTTATGCTGTTAAGAGGTTTTTCGTTTTCTTTTAGTACTCG CTGGTTAGGAGGATTGGAGTGATCTATGCATACAAAGGGAACATAATCGAACACACAATCAGCTCTCAGTGAGACCTATA CAATATCAAAGTATAATGTCTGTAAAGGTTAATTCATCGTAGAATCGAATTTTGTTCAGGAGAGTTTCAAAGTATTTTAG CCTGCATTCCGTTTTAGCTTGGTCATATTAATAACTTACATAGTTATATGCACTTGGAGGTTGCTAATTTGCTTTCTTTC AATGAGCAATCAATTTTTGTATGCATTTCATCCTGTTTTAGCTCATTTTCTGTGAGATTCTTGTTTTGAGCGTTCTACTT TCTCCACTTATGGCCTTGTTTCCTTTGCCATCATGAAAAAACTTTTGCTGGATTCATTGGTGTCTCAGCAAACCTGCATG CAAATTGCAAAACTCAATAGCATTCTCATCAAGTGTTATCATAATTTGACTTTTATCTCTATTAATCTTTCAAAGAGTAT AATAATGAAGTGATAAAGAACAAACCGCCCAAATAAGAAAAAAGAAAATCAAGTTTGTCAGTGAGTGTCCCATGTCTGAC AGTGGACGCGCTTACCAACCGCAATTGGCTCCCTTCCCTACCAAGTACCAACGTGCACACATCAGATACGAGAATCCCGT TCAGGCAGCGAAGCACGTTTC
CDS sequence (LotjaGi1g1v0361000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTTTATAAATGATGCAATCGTATCATTGGATGCTTTTGTTAATACATTCGAACCAGCAGCTGTATTCTTCTCTTG TCCAGTGGAAATGAGCTATGGGAATGAGGAACTGCTAAGTCTCCTTGCCCGATTGCATGATTCGCTAATTCCATCCTTGC AAAAGGGATTCCAAATCATTTTTGCTGACAAACAAGATGACAGAGTGTCTAATACCTTGGTTAGTTTGAAGATGTTGAGA ATAAGATTGGTGAACTTTGGGTGGCAACTTTTGCACTTCTGCTATCTAAGTGATGAAGTGTTCAGAGATAGCATCCCCCT TGCTGCGGTCACGAAGATGTTTCCTGCCAATGTAGAGGACCCAGTCATCAGAGCTGATATTCTGGTTCAAACACTTAGAG AGATCAATTCAGTATCATTATGTTTTCAGGAAATCCTCCCGAAGAAAACATTTCTTCAAGATGTTGAAAGGAACTTCAAT TTATTAAGCAGGATTGAGAGATTAAAGGATAATGGATGGATATTCATGGATGATGAACAGTTTCAATATATATCTGGGAT TTTGAGTTCTCCAAAAGAGATTTCTAAGGAGTCAAGTTCTACAATGACCACTGTGCCGAACCAAGCATTGCGGATGGATG AAGATGCGGCTATTATAGAGTCAAAGATCAGTCAAATTAGGGACCTGTTCCCTGATTATGGTAAAGGGTTCTTAGCTGCC TGTCTCGAGGTTTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAGGATACCCTTCATGAAGATCTGCGGTG CTTGGATACTTCTCTAGAGACAGTTCCACAGTCATTAGCCAAGACCACCACTGTGAGCAGAATTGATAAAGGAAAAGGTA AATTAATTGATTCTACGTCAGTGTCCTCAAATACAGTTGTTGTTAGTGGGAAGCAACAGACAGAAGCGCCATTGATGCCA TCCTCTGCTCCGCTAGGGAAATTTATTAGGAAATCTAGAGCTGATGCGCCTCCTGATCTCAGTATTTTGGATAAAAAGGA TGAGAAAGATGTATTGAAAACCGCTATGCTTTCACAATATGAATATGATGATGAGTATGATGACTCTTTTGATGACTTGG GTCTAAGCGTGGGGGACTCTGGATTAGAAGAAAATGAAATACTCGGTGACAAAATGAATGCAATGCCCCAATCTTGGGCA AAAGAAACTGGAAACTCCGGCCAAAATGCCCCTAATGCAAAATGGGGCTCCAAGAAAAAGCCACAGTTCTATGTCAAGGA TGGTAAAAATTACAGCTACAAAGTGGCAGGTGCAACAGCAGTTGCAAATTCTGATGAGGCTTCATTACTTAATCAAGCTC AGAAAGAATTAATACATGGTCTTGGACGTGGCGGCAACCATCCTTTTGGTGCGGTGAGGAAGTTCACAGAATTCAAGGAT AATGATAACCAGTCCCATGTTTCTGAAACAGAAGGCAGAGGGGTTTTGGGCAATCCTAGAAATAGGGGAAGGAATGAAGG GGGAAAACAAACTGAACCTCATCAACCACAGGAGACACAGTCTAATGGTTCTGAGATGGAAGGACAAGATCATGTTTCAA ATAACAGGGGCAGAGGGAGAGGCAGAGGGAGGGGAGGTGGAAGAAGCAACCATTACAGGAAAGACCAAGCCATGAAGAAG CATTTCTCTGGATTGGGTGGTTTTTAA
Protein sequence (LotjaGi1g1v0361000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDFINDAIVSLDAFVNTFEPAAVFFSCPVEMSYGNEELLSLLARLHDSLIPSLQKGFQIIFADKQDDRVSNTLVSLKMLR IRLVNFGWQLLHFCYLSDEVFRDSIPLAAVTKMFPANVEDPVIRADILVQTLREINSVSLCFQEILPKKTFLQDVERNFN LLSRIERLKDNGWIFMDDEQFQYISGILSSPKEISKESSSTMTTVPNQALRMDEDAAIIESKISQIRDLFPDYGKGFLAA CLEVYDQNPEEVIQRILEDTLHEDLRCLDTSLETVPQSLAKTTTVSRIDKGKGKLIDSTSVSSNTVVVSGKQQTEAPLMP SSAPLGKFIRKSRADAPPDLSILDKKDEKDVLKTAMLSQYEYDDEYDDSFDDLGLSVGDSGLEENEILGDKMNAMPQSWA KETGNSGQNAPNAKWGSKKKPQFYVKDGKNYSYKVAGATAVANSDEASLLNQAQKELIHGLGRGGNHPFGAVRKFTEFKD NDNQSHVSETEGRGVLGNPRNRGRNEGGKQTEPHQPQETQSNGSEMEGQDHVSNNRGRGRGRGRGGGRSNHYRKDQAMKK HFSGLGGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 567 | 567 | 1.6E-193 | – | |
| PANTHER | 1 | 567 | 567 | 1.6E-193 | – | |
| Gene3D | 218 | 261 | 44 | 1.8E-21 | – | |
| SUPERFAMILY | 218 | 275 | 58 | 2.55E-17 | ||
| SMART | 218 | 260 | 43 | 7.5E-9 | ||
| ProSiteProfiles | 218 | 261 | 44 | 14.964 | ||
| CDD | 220 | 259 | 40 | 1.53578E-17 | ||
| Pfam | 220 | 259 | 40 | 1.3E-8 | ||
| MobiDBLite | 398 | 420 | 23 | - | – | |
| MobiDBLite | 398 | 415 | 18 | - | – | |
| MobiDBLite | 477 | 568 | 92 | - | – | |
| MobiDBLite | 512 | 530 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0361000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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