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LotjaGi1g1v0361000.2

Overview

Field Value
Gene ID LotjaGi1g1v0361000
Transcript ID LotjaGi1g1v0361000.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Activating signal cointegrator 1 complex subunit 2; TAIR: AT1G27752.1 Ubiquitin system component Cue protein; Swiss-Prot: sp|Q9H1I8|ASCC2_HUMAN Activating signal cointegrator 1 complex subunit 2; TrEMBL-Plants: tr|I1JTQ4|I1JTQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:83586359..83593465) extracted from Lotus japonicus Gifu genome v1.2.

CACTAACCCAACCCTGGCTTGAGGTGCCATTGATTGAGTGTGTGTCGCTTTTCCTTCTTCATAGATAGCAATTACGTATT CGACAACACTTGTTGATCGTTTCTGTTTCTGATAACAATGTCGAATCGATTCAGTCAAGGAAGGCAAGACACTAGTACCA ACAACAACAACAACAAGGGTTTCAACAAATCACACAAGAAATTTCTCCCCAAAAACCCCAACCCGAAACCAACCCTTTCA GCTTCCCTCAGAGAATCTGGTTCCGGTAGCAGTAGCGGTAATCCGTCAGGTAGCGACGTTGGCAATGGCAATTTCGTCAA ATACTTGCCGCAAGACGAGGCTGTGGCAGCTGGTCTTGGCGCTGAGGATGGCGGTTTGGATCCCATCGAATCTCAGAGAG TCGTTGATCTTCTCAATTCTGAGTTGTCTCGGTTGCTCAAGTTGAAACCTAAAGAATTCTGGAAACAAGGTTTGCACTCC AATTCACTGTATCATATTCATGCTAAAAACTGCTTTTGATTCTGCATAACATGCACTGTTAGAATATCTGGAGTCTTTGT GTTGTTGTTATCATGTTTTGGTTATCGAATTCTATTTCTATTGTATTTGCAGTGGCTGCTGACACCTCCTTGCATGCGTT TCTGGATAGCTTCTTGCAATTTAGGAGCAGGTGGTATGATTTCCCTCACCGTGGGGTTAAAGGGATTCTTGCAGGTGTTA TTGTTGGAGAGATTGATTTGAGTCGCCGCGTGTTCATGGTATTGTATCGAATGTAAGTTTTTTTATAAGGTGGCATGAAC TTGGAAGTTGGAATACACTGATTTGTACTCTATTTGGTTTAATCTTCCATGACTTATAATGCCGTGCCATGTATCTTGCA GTTCTTCCAATAAAGATCCTGGTGGTCGGCCTGCTGATACACTCAGTTCTAGAGACCATGGAGGTGTGATCTCCCTTATC CTTTTTCTAGTTTGTTGACAATTAAACTCATTTTAGCAGAGCATACAATGCACGGTGTTTACTTCATTTCGCCGCCTTGA AAGGACGCATACGACACGTGAACTGATATAAAGCACATAAAAGTAGTACTATAAATTAATAGAAAAACACACATGTTAAA GTAGAATAACAAATCCATATTCTAGAAGTTAGAATGAGGTATTATATAGTTTTGACACAATAAAATTATATTCTTTATCT AATTATTGTGATATTCCCATATGTATTGGTAAGTTTTCAATAAAAAAAAGTAAAAAAAGTGAAATATCAGTAAAAGTGTC CATGAAATGTTACGTGTCCGAAACGGTTATGACACGATACAGATATGCCACATACGGTTACTACTTTGAAGCAGTGTTGT CAAATAGCAGATATCGCGGCGCTATAACGTAGCGCTCTGAGGGCTCACCGCTATCCCTATTTGCCACTATTTTTTGCTCT GAGGGCTTGATGTAGTGGATTTTTGGCTTTCTGCAATCCACGATTAACAACATTGCTTTGAAGTCTCCGTGCTTACTTGG CCGCCTTTATATGGTTTTGTTGTAATTTATTACTTGTATCTAGCAAATACTGCTCACCTTTATGTTGTGCGCATCTGTGG GCTCCATTTAATCTTAGTGTAGCCAGAGATTGGAACTTTTTTTTCCTGGTTTATTATTTTTTTAATTTTTTTGATCATCC CTTGGAATTAAGCTTTGCACTTACCATTAATTTTACTGACATGTTAGAAATCACGGGCTTGTCGTCTATAAAACTTGTCA GTCTCAGGCAACGGGGGCAATTAATTCTTAAAATGTGCTTTGGGCATGTTGCATCTTTAACTAGTAGTTTCTGTGATTGA TAGAGTATAATAATATAACATCTCACATTTACTGATGTATTGTTTGGGAAAATTATTCATGTTGGGCAGTTACCTTGTAT TTTGTTTATGTATACGGATTCACTGTTGTTCACTAATATTGCCTGTAGTTCTTTTGCAGGAGAAGAAGTTGCTTGAACTG CCGAAGTTGTTAGATATATGTGCCATATACTATCATGAAAATGAAGAATTGACAAGATTGCTGGTAAGCATATGTAATTT TTAGAGGATCATTAATAACTTAGCATCCCTTAACGGCAGTGTATATTCTTATATTGCTTTAGGCATCATTAGGTTCAATA AATATAGCTTTTAAGAAGAATTATCTCGGAGGTGATGGTTTTTCCTTCACAATTTTCTATATTAAGATTAAAAAACACTT CTATACTACTGTTCCTTTAAGGTGCATTTAACTTGTCTTTCTTACTTTTCTCTCTTACTCACTTACATCTTTCAGGTTAG AAATGCTTTGAGTGCTCAGCCTTGGATCCATAATAGTTTGCCTTCAGTAATATCCCATTTTATGGGTATTGTCAGCACAA TGCACGAACGTTGCAGTTCTTCATTGGAGGTATTCTTGTAATTTGACTGAGCATAAATGTGATATATCTATGAGTTTTTT TTTACTGTCTTTAACTAAGCAAGTCAAGTCTATTTGAGAGTTTTGGTCGAGTTGAGTCATATTATTAGGTAATTTGATAA GTATAATTTTGGTTTTCAACGAACTGCTTTAGTCCATAATACTTGCATAAAGTCACTTGATGGGCATCTTCTCTATATTT CAGTCCTTTTCATTTATTTGTTTGGGTTTTGTTTTCATATTTCTCGCCGAACAATGAAATAGAAATGGATTGCATATTTA ATTTTTTGTGATCCATATAACCCATTAGGATGTGAAAGTAGAAAGGCCAACCACAATTTTGATTTGCTTTCTGTTAGAGT AATATGGAGTCCTTATTTAGTTATCCTATGCCAAAAAGTGGCTACTCTTTATTGTTAGAATTCACACTTCCAATACAAGT ATAGTGTGCAAAAAGATATTTCAGGACAGGCCCATGTTCTGTTTGGTGATATGTGCTAAAGGAAACTTATATAGAAGATG TGTATAGCTTACAGTATCTGTATTGTTTGGACTTATGTATAGAACATACATCTTTTGGTCTTATAAAATATTAATTATTA ATTCGCATTCCCTGTCTTAGAGCTAGAATAATTGACCATGTAAAAGTATGAATCCTGGTCGTTTTTATTCTTTACATTCC ATTTGAACTTCCTTTTGGCATATGTTATGTCTGATGACCTTATTTCTCTCGTTTCCATAAATTATTTGACTTGTTTATAA TGAATAAATGCATAAAAAAATCTTTAAAATAATTATTTATAATTTACTGAATCATGAAAGAAAGTTTGTATGTATATTTA TTGTATAAAGAAAAAGTTCTGATAAAAACTAAAATTTTCTTTTATACAGGTCTTATTTTCTTCTGGAAGTCCTGATAACC AGAATGCAACTTTTCTTCAAGCTGATCTACTGGAGGCAAGTTGCTTCATATTTTTTTCTCTTGGTAAATGAGTTGCGACT CAGTTTATGCATTTCCCGGTATGCATTTGGGTACTTGTGGGTACGCACCTATTTACCATAATAATTCTTCAAACAAACAA TTTTTTGTACTTGTTGAATACTTCTTGGATACAGGCAATACCCCTACCTGCATAATATTTATAAAAAATCTTGTTTCACG TACCTGGTAACGGTACTGGTACTTTATCCATTTAACATAGGACATAATCTTCTATTATGAGGTGAGGGATCAACCAGATA TCGCAAGCTTCAAATCATTTATCTGTAAGTTTAATTTTCTTTGACCACGGAGAAGTGAATTGCTTAGCCTAGATTATAGA ATAACCACCCATTCATTCCCAACCAGGTACTCTTGATCATATGGCTAGGTACTAGTCTCAGCCATCTCTTTAACCTTAAC CTGTCCAGCTATCGCAGGCATAATTCAGCTATGCCTGGACATTAGAAATGCTGCAGAGAACTTTGAATATATGGCACCTA CTGCATATCAATTGATTTATAATATCTTTGCTACCTCACCTATACAACCCAATTTCCGCGCACAGATTTTTTATGGACAA TAACTACTGCCTATACTTCAAGGCTATTCAAAGTAGAATTTCGCTGCATGCCAGGGGAATGTGTATTGGCTCTGCCATAG TTTCTTTAAATACGTAGCATTTAGATTATTCACATTGTAAGATGTTGTTGAGCCTAAATTTATCTAGTTCTTTGACATAT GCAGCACAATATTGATGCTATCTGTTTTTTTGGATAGGTGATGGACTTTATAAATGATGCAATCGTATCATTGGATGCTT TTGTTAATACATTCGAACCAGCAGCTGTATTCTTCTCTTGTCCAGTGGAAATGAGGTATCTGATTGATGAAATCTTGCTT TTTATATTGAGTAAAGGCTGAATGCAATATATTTTTACAGTAAAAATATGGCTTATTATAAATCCAGTCTAGCATTCATA TAAGATTTACATGATTGATTTATCCCAACAGAAACTATGATTAAGATTGGCATTTGAAAGCAATTCTAGAAAAAATGACA TTTTGTTGGTCTATATAATTGTAGCTATGGGAATGAGGAACTGCTAAGTCTCCTTGCCCGATTGCATGATTCGCTAATTC CATCCTTGCAAAAGGGATTCCAAATCATTTTTGCTGACAAACAAGATGACAGAGTGTCTAATACCTTGGTTAGTTTGAAG ATGTTGAGAATAAGATTGGTGAACTTTGGGTGGCAACTTTTGCACTTCTGCTATCTAAGTGATGAAGTGTTCAGAGATAG CATCCCCCTTGCTGCGGTCACGAAGATGTTTCCTGCCAATGTAGAGGACCCAGTCATCAGAGCTGATATTCTGGTTCAAA CACTTAGAGAGATCAATTCAGTATCATTATGTTTTCAGGAAATCCTCCCGAAGAAAACATTTCTTCAAGATGTTGAAAGG AACTTCAATTTATTAAGCAGGATTGAGAGATTAAAGGATAATGGTAATTATCTTATATGCTAAATAACACAAGTCACTTG CATATGCTTGTATGAATATAAACATACATTACTAGGATTACTATGAGTTTTGGCAAAATGCTTGATCTAGTTAAACTTTT TAGAGGGATAATGTTTTTATCCCTTCTAAATATAAGGTGAAATTAGACCTCTCTGACCCTTCAAAACTATATTTTAACTT TTTGCAATTTTTATAGTGTGGCATATTACTTTTCTAATCTGGTTTCTCTGATTCAGGATGGATATTCATGGATGATGAAC AGTTTCAATATATATCTGGGATTTTGAGTTCTCCAAAAGAGATTTCTAAGGAGTCAAGTTCTACAATGACCACTGTGCCG AACCAAGCATTGCGGATGGATGAAGATGCGGCTATTATAGAGTCAAAGATCAGTCAAATTAGGGACCTGTTCCCTGATTA TGGTAAAGGGTTCTTAGCTGCCTGTCTCGAGGTTTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAGGATA CCCTTCATGAAGATCTGCGGTGCTTGGATACTTCTCTAGAGACAGTTCCACAGTCATTAGCCAAGACCACCACTGTGAGC AGAATTGATAAAGGAAAAGGTAAATTAATTGATTCTACGTCAGTGTCCTCAAATACAGTTGTTGTTAGTGGGAAGCAACA GACAGAAGCGCCATTGATGCCATCCTCTGCTCCGCTAGGGAAATTTATTAGGAAATCTAGAGCTGATGCGCCTCCTGATC TCAGTATTTTGGATAAAAAGGATGAGAAAGATGTATTGAAAACCGCTATGCTTTCACAATATGAATATGATGATGAGTAT GATGACTCTTTTGATGACTTGGGTCTAAGCGTGGGGGACTCTGGATTAGAAGAAAATGAAATACTCGGTGACAAAATGAA TGCAATGCCCCAATCTTGGGCAAAAGAAACTGGAAACTCCGGCCAAAATGCCCCTAATGCAAAATGGGGCTCCAAGAAAA AGCCACAGTTCTATGTCAAGGATGGTAAAAATTACAGCTACAAAGTGGCAGGTGCAACAGCAGTTGCAAATTCTGATGAG GCTTCATTACTTAATCAAGCTCAGAAAGAATTAATACATGGTCTTGGACGTGGCGGCAACCATCCTTTTGGTGCGGTGAG GAAGTTCACAGAATTCAAGGATAATGATAACCAGTCCCATGTTTCTGAAACAGAAGGCAGAGGGGTTTTGGGCAATCCTA GAAATAGGGGAAGGAATGAAGGGGGAAAACAAACTGAACCTCATCAACCACAGGAGACACAGTCTAATGGTTCTGAGATG GAAGGACAAGATCATGTTTCAAATAACAGGGGCAGAGGGAGAGGCAGAGGGAGGGGAGGTGGAAGAAGCAACCATTACAG GAAAGACCAAGCCATGAAGAAGCATTTCTCTGGATTGGGTGGTTTTTAAGTACATAAGCGAATCAACATACATACATTTC ATACTTGTCGAGTTACCATACATCTGCATGTGGTCGGTAACCTTTTGGCTAGTGTCTCTACATGTGAAACCCAATTTTTG GCAGCATTGGAGTTCAATGTGGTGCATCAGAGTGCATAAAACCCTTGTCTACAGCCCTTGAGAAACATGGATCATAAACC TCAAGATATGATGCGGTTGGGGGATTCAAAAACCCTTTATATTGTGGTCCCAATTTAAAACTGCAGCTAGTAATATACAA CAGATACATTCATGTTTATGCTGTTAAGAGGTTTTTCGTTTTCTTTTAGTACTCGCTGGTTAGGAGGATTGGAGTGATCT ATGCATACAAAGGGAACATAATCGAACACACAATCAGCTCTCAGTGAGACCTATACAATATCAAAGTATAATGTCTGTAA AGGTTAATTCATCGTAGAATCGAATTTTGTTCAGGAGAGTTTCAAAGTATTTTAGCCTGCATTCCGTTTTAGCTTGGTCA TATTAATAACTTACATAGTTATATGCACTTGGAGGTTGCTAATTTGCTTTCTTTCAATGAGCAATCAATTTTTGTATGCA TTTCATCCTGTTTTAGCTCATTTTCTGTGAGATTCTTGTTTTGAGCGTTCTACTTTCTCCACTTATGGCCTTGTTTCCTT TGCCATCATGAAAAAACTTTTGCTGGATTCATTGGTGTCTCAGCAAACCTGCATGCAAATTGCAAAA 

CDS sequence (LotjaGi1g1v0361000.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCGAATCGATTCAGTCAAGGAAGGCAAGACACTAGTACCAACAACAACAACAACAAGGGTTTCAACAAATCACACAA GAAATTTCTCCCCAAAAACCCCAACCCGAAACCAACCCTTTCAGCTTCCCTCAGAGAATCTGGTTCCGGTAGCAGTAGCG GTAATCCGTCAGGTAGCGACGTTGGCAATGGCAATTTCGTCAAATACTTGCCGCAAGACGAGGCTGTGGCAGCTGGTCTT GGCGCTGAGGATGGCGGTTTGGATCCCATCGAATCTCAGAGAGTCGTTGATCTTCTCAATTCTGAGTTGTCTCGGTTGCT CAAGTTGAAACCTAAAGAATTCTGGAAACAAGTGGCTGCTGACACCTCCTTGCATGCGTTTCTGGATAGCTTCTTGCAAT TTAGGAGCAGGTGGTATGATTTCCCTCACCGTGGGGTTAAAGGGATTCTTGCAGGTGTTATTGTTGGAGAGATTGATTTG AGTCGCCGCGTGTTCATGGTATTGTATCGAATTTCTTCCAATAAAGATCCTGGTGGTCGGCCTGCTGATACACTCAGTTC TAGAGACCATGGAGTTCTTTTGCAGGAGAAGAAGTTGCTTGAACTGCCGAAGTTGTTAGATATATGTGCCATATACTATC ATGAAAATGAAGAATTGACAAGATTGCTGGTTAGAAATGCTTTGAGTGCTCAGCCTTGGATCCATAATAGTTTGCCTTCA GTAATATCCCATTTTATGGGTATTGTCAGCACAATGCACGAACGTTGCAGTTCTTCATTGGAGGTCTTATTTTCTTCTGG AAGTCCTGATAACCAGAATGCAACTTTTCTTCAAGCTGATCTACTGGAGGTGATGGACTTTATAAATGATGCAATCGTAT CATTGGATGCTTTTGTTAATACATTCGAACCAGCAGCTGTATTCTTCTCTTGTCCAGTGGAAATGAGCTATGGGAATGAG GAACTGCTAAGTCTCCTTGCCCGATTGCATGATTCGCTAATTCCATCCTTGCAAAAGGGATTCCAAATCATTTTTGCTGA CAAACAAGATGACAGAGTGTCTAATACCTTGGTTAGTTTGAAGATGTTGAGAATAAGATTGGTGAACTTTGGGTGGCAAC TTTTGCACTTCTGCTATCTAAGTGATGAAGTGTTCAGAGATAGCATCCCCCTTGCTGCGGTCACGAAGATGTTTCCTGCC AATGTAGAGGACCCAGTCATCAGAGCTGATATTCTGGTTCAAACACTTAGAGAGATCAATTCAGTATCATTATGTTTTCA GGAAATCCTCCCGAAGAAAACATTTCTTCAAGATGTTGAAAGGAACTTCAATTTATTAAGCAGGATTGAGAGATTAAAGG ATAATGGATGGATATTCATGGATGATGAACAGTTTCAATATATATCTGGGATTTTGAGTTCTCCAAAAGAGATTTCTAAG GAGTCAAGTTCTACAATGACCACTGTGCCGAACCAAGCATTGCGGATGGATGAAGATGCGGCTATTATAGAGTCAAAGAT CAGTCAAATTAGGGACCTGTTCCCTGATTATGGTAAAGGGTTCTTAGCTGCCTGTCTCGAGGTTTATGACCAGAATCCAG AAGAGGTTATTCAAAGAATTTTAGAGGATACCCTTCATGAAGATCTGCGGTGCTTGGATACTTCTCTAGAGACAGTTCCA CAGTCATTAGCCAAGACCACCACTGTGAGCAGAATTGATAAAGGAAAAGGTAAATTAATTGATTCTACGTCAGTGTCCTC AAATACAGTTGTTGTTAGTGGGAAGCAACAGACAGAAGCGCCATTGATGCCATCCTCTGCTCCGCTAGGGAAATTTATTA GGAAATCTAGAGCTGATGCGCCTCCTGATCTCAGTATTTTGGATAAAAAGGATGAGAAAGATGTATTGAAAACCGCTATG CTTTCACAATATGAATATGATGATGAGTATGATGACTCTTTTGATGACTTGGGTCTAAGCGTGGGGGACTCTGGATTAGA AGAAAATGAAATACTCGGTGACAAAATGAATGCAATGCCCCAATCTTGGGCAAAAGAAACTGGAAACTCCGGCCAAAATG CCCCTAATGCAAAATGGGGCTCCAAGAAAAAGCCACAGTTCTATGTCAAGGATGGTAAAAATTACAGCTACAAAGTGGCA GGTGCAACAGCAGTTGCAAATTCTGATGAGGCTTCATTACTTAATCAAGCTCAGAAAGAATTAATACATGGTCTTGGACG TGGCGGCAACCATCCTTTTGGTGCGGTGAGGAAGTTCACAGAATTCAAGGATAATGATAACCAGTCCCATGTTTCTGAAA CAGAAGGCAGAGGGGTTTTGGGCAATCCTAGAAATAGGGGAAGGAATGAAGGGGGAAAACAAACTGAACCTCATCAACCA CAGGAGACACAGTCTAATGGTTCTGAGATGGAAGGACAAGATCATGTTTCAAATAACAGGGGCAGAGGGAGAGGCAGAGG GAGGGGAGGTGGAAGAAGCAACCATTACAGGAAAGACCAAGCCATGAAGAAGCATTTCTCTGGATTGGGTGGTTTTTAA 

Protein sequence (LotjaGi1g1v0361000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSNRFSQGRQDTSTNNNNNKGFNKSHKKFLPKNPNPKPTLSASLRESGSGSSSGNPSGSDVGNGNFVKYLPQDEAVAAGL GAEDGGLDPIESQRVVDLLNSELSRLLKLKPKEFWKQVAADTSLHAFLDSFLQFRSRWYDFPHRGVKGILAGVIVGEIDL SRRVFMVLYRISSNKDPGGRPADTLSSRDHGVLLQEKKLLELPKLLDICAIYYHENEELTRLLVRNALSAQPWIHNSLPS VISHFMGIVSTMHERCSSSLEVLFSSGSPDNQNATFLQADLLEVMDFINDAIVSLDAFVNTFEPAAVFFSCPVEMSYGNE ELLSLLARLHDSLIPSLQKGFQIIFADKQDDRVSNTLVSLKMLRIRLVNFGWQLLHFCYLSDEVFRDSIPLAAVTKMFPA NVEDPVIRADILVQTLREINSVSLCFQEILPKKTFLQDVERNFNLLSRIERLKDNGWIFMDDEQFQYISGILSSPKEISK ESSSTMTTVPNQALRMDEDAAIIESKISQIRDLFPDYGKGFLAACLEVYDQNPEEVIQRILEDTLHEDLRCLDTSLETVP QSLAKTTTVSRIDKGKGKLIDSTSVSSNTVVVSGKQQTEAPLMPSSAPLGKFIRKSRADAPPDLSILDKKDEKDVLKTAM LSQYEYDDEYDDSFDDLGLSVGDSGLEENEILGDKMNAMPQSWAKETGNSGQNAPNAKWGSKKKPQFYVKDGKNYSYKVA GATAVANSDEASLLNQAQKELIHGLGRGGNHPFGAVRKFTEFKDNDNQSHVSETEGRGVLGNPRNRGRNEGGKQTEPHQP QETQSNGSEMEGQDHVSNNRGRGRGRGRGGGRSNHYRKDQAMKKHFSGLGGF 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 24 24 -
MobiDBLite 1 64 64 -
PANTHER 15 851 837 0.0
PANTHER 15 851 837 0.0
MobiDBLite 36 62 27 -
SUPERFAMILY 502 559 58 4.46E-17
ProSiteProfiles 502 545 44 14.964
SMART 502 544 43 7.5E-9
Gene3D 502 545 44 2.9E-21
Pfam 504 543 40 2.1E-8
CDD 504 543 40 2.04113E-17
MobiDBLite 682 699 18 -
MobiDBLite 682 704 23 -
MobiDBLite 761 852 92 -
MobiDBLite 796 814 19 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0361000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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