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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0363400 |
| Transcript ID | LotjaGi1g1v0363400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | AP2-like ethylene-responsive transcription factor; TAIR: AT4G37750.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q38914|ANT_ARATH AP2-like ethylene-responsive transcription factor ANT; TrEMBL-Plants: tr|A0A1J7GBC7|A0A1J7GBC7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0363400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:83862738..83867107) extracted from Lotus japonicus Gifu genome v1.2.
CATAAATAAAGCCTTGTTCTCGTCTTTGTAGTTATCACACTCATTCACTCATTCTCAATTCTCAAACAAAAAATAAAACA CTTTTTCCAATTACAAATTTCTCACTCACGAGCCCACTCTAGATAGTACCCCATTTTTTCATGTCATGCTCACTAGATTC AGCTAGCTAGCAGCCTACTTGTTCATGTTTCCAAGGCACACACAGACACAGAAAAAGCCTCAGAAACCTGACCAAAATAG TTAATCCTGCCATATACATTCCGGGGTCTGTTCTCTTCTCTCACCATTTTCTAAAATTTCTTCTTTCTTGTGATTCTGGG TTTAAGCCAGGGTTTAACTAAAAAACTACTAGGTGAATGTGTTAATGAAGGAAGCTTAATCAATCACAGGGAAAAAAAAG GAGAGAGAGTTTGTGGGGGCAAAAGCTTTGGTCTTTCTCTTTCTCATATACACAGATCCCTATGGAATGAAGTTTGTGTG TGTGTGTGTGTGCGCTCCCTCTCCAGCATAAGGAATTCATTCTTTTTGTTTAGTTTAAAGAGACCGGTCTTGTACATGTT TTTTCTGTGATAGAACAATAGTTTGGTTGGTGGAGAATTTTCTCTGTGAGGTGTTACTAGACAACAACAACAACAAAAGA AAAACTGATTCTTCTTTCAACATGGTTAGTTTATTTGCCAAGCAATGATTGAGTAAGAGAGATTCTGGTAGCAAAAATTT CTAACCTTTTTCAAGTAAGAAAAGAAGAAGATGATGAACAACAAGTCCATGAATGACAACAGTGATGATAGAAACGACAG TCATAATAACTGGTTGGGATTCTCTCTTTCACCTCACATGAAAATGGATGCTATAACTTCTGCCCCTCTCTACCACCATC ATCATCAACAGCCACAAGCTTCTGGAGGTTCCAACACTGTTCCTACAACCTTCTATGGTTCTTCTGGATTCTGTTATGGT GTTGGAGAAAATGGTAACTCCCATTCTCCTTTGACTGTAATGCCTCTCAAATCAGATGGCTCACTCTGCATCATGGAAGC TCTCAGCAGATCACAAACACCAGGTAAATTTCCTTTCCCATTAGAATATTTTGTATTCTTTCGAAAGTTCATATTTTTAA TGATTTTCTGGTGATCACCCCTTATTGAAGGGATGGTGCCTACTTCATCTCCAAAACTTGAGGACTTTCTAGGTGCAAGT ATGGGATGTCATGAATATGGAGGCCAAGAAAGTGAACTAGCAATGTCTCTGAGCTTAGACAGCATCTATTACAGTACTCA GAATGCAGGAGATCCTCATCAAGCTAACAGAGACCATTCACTTGAACTTCTTTCACATCCTTATTACTCAGGACTTGATT GCCATGGGATGTATCAATCATCACCATTGGAGGAAGAAAACAAGGAAACAGGAAATGTCACAGCTTGCAGCTCTCAAATA GTTGAGTATTCTGCTCAGCATGCTGTGGAGCAGAAAATGAACTGTAACATTGTGAATGATCGTGGAAATGCTGCTTCTGG TGGTGGTTCTGTTGGGTGTGGTGGTGAGTTACAGTCACTGAGTTTATCTATGAGTCCTGGCTCTCAATCTAGCTGTGTCA CTGTTCCGAGTCAGATCTCACCTTCTGGGAGTGACTCAGTGGCTGGAAATGGGAAAAAGAGAGGCGCTGCTAAGATGGGT CAGAAGCAACCAATGCATAGGAAATCTATTGATACATTTGGACAGAGAACATCTCAGTACAGGGGTGTCACAAGGTTAGT TTAATCATGAATTTTTTAGATTTGTAACTCTCTTTGACTATGTGTCTGCCTTTTGAAAATTGTTTTTGTTTGTTTTTTTA TAATGAGTCAACTTCTGATTATTTATCATGTTTATTCTGTATTAGGCATAGATGGACTGGTAGATATGAAGCACATTTGT GGGATAACAGTTGCAAGAAGGAAGGACAAACCAGGAAAGGAAGACAAGGTTAGTTAGTGAAATTTGAAAATAACTAATTC CTAACCAATAATAACTTGGCTTTTTTGAAAATATTTCCTACTAAAGTCTTTGGTTCCCTTGTATTGTTATCTTGTGTCCA CTAACTCATCTTTTCTTTGTTTGTACTTGTTGATGATGACTTAATCAAACTTTGCATCTTGCAGTATATTTGGGTAAGTA ACAAAATATCCCCTTTTCTCTTTCATGTCGACACTATTTCTAATTCTTATGTGTGGTCAATTTATTTTTAATTTTTTTAT TTTCTTTTTTTTAATCTTTAGGGGGTTATGATATGGAGGAGAAAGCTGCAAGGGCCTATGATCTTGCGGCTCTCAAGTAC TGGGGAGCTGCTACACATATAAACTTCCCTGTATGTTTAAATTCTTTTGCATTTTCTTGCTTACTTTATTTTTCAACATT TATATATAAGCTGCATGCTTCAGATTCCAATTATTTTTCTTCCTACCTGCAGGTAGAAAATTACCAAGTCCAACTTGAGG AAATGAAGAACATGACCAGGCAGGAATATGTTGCTCACTTGAGAAGGTACTTTTGTTGGTTAATTGGTAATTATGTTGGA AAAAGCTACCGTTATTGTGTGATAATCATGATGGTCAAGTTTTTATTTGCTTTGCAGAAAAAGCAGTGGTTTCTCAAGGG GTGCTTCAATGTACAGAGGAGTGACAAGGTTCATAAAATTCTCTTGCCTCACTCTCATAACACTCCATTGATTTGAAGAT TTGAGCTAAGTTAACTTTTTGATGTTATGCAGGCACCACCAACATGGCAGGTGGCAAGCTAGGATAGGCAGAGTTGCTGG AAACAAGGACCTTTACCTTGGCACATTCAGTGAGTCCTATTAAACTACACTAATCCCCTGAATATCCTTATCTGAACAAG TTCTGAATCAAGCACTTAATCTGTTAAAAAATAATTAGCATTTCATTTACGAACAAGGAATGTCCTTATATATCAAAGGC TCTTGCTTGTTCAAAGTAACATTCAAAGGACACTTTTATGTAATTTCTGCTTCAATCTTTCTTTTACCAAACACTAGTGA GGAGTGACTGGTGGGAGTGCTTTTATAAGGCTGACCATATGGCCACTTTGAGCGCAACATGCCACTATTTTTTAAGGCTG TTCTCTCACACAAAAACATGATATAAATAGGAAAAAAGGTATCTCAGATTCTCAGCAAGAATGGTTAAGAAAAGTTCAGA TTTTTAACATAATAAATAATCTCCTTGTTGAAATATCTCACATTGACTAGGGATATAGACAAATTAGTGTTAGATTAAGC TTAATTTGAATTCTAATAGTCATCTTCTCCCTGAATTACATTTTAGGCACTCAAGAGGAAGCAGCTGAAGCATATGATGT AGCAGCAATCAAATTCCGTGGAGCAAATGCTGTCACCAACTTTGACATATCAAGATACGATGTCGAAAGGATCATGGCCA GTAATGTTCTGCTTGCCGGGGACATGGCTAGAAGAAACAAAGATAATGATCCAAGAATTGAGGCCATTCAATGCAACAAT GGAGAATCAGTCCAAGCTGCAGCTAGAAACAACAATGAAAATGTTTCAGATTGGAAAATGGTTTTGCATCACCCTCCACA GCAAGAACAGAACACTAACTGTGACCAAAAAGTTATGAATTGTGATACCTACAGAAACGCTGCTTTCTCTATTGCGCTAC AAGACCTTGTTGGGGTTGATTCATTAGGTTCTAGCTATGACTCTAGCAAGATTGGGACTCATTTTTCAAACCCTTCTTCT CTGGTAACAAGTTTAAGCAGTTCAAGAGAAGCTAGCCCTGAAAAAACTGGTCCTTCATTACTCTTTCCAAAGCCTCCAAT GGAAACAAAAATTGTCAACAACCTCAATTCCTCTGGTGTTAGTTCTTGGTTTCCCTCTCCAATGAGGCCAGCTTCTGCTA TCAACTTGTCTCATTTGCCAGTTTTTGCTGCTTGGAATGATGCCTAGAGATAGATGCTATGTTAAATTCTGCATGTAAAA GAAAAAGGGTTGGGAAGAAAAATCATTGATGGGGAGGAAAAAAGGTGAATTTTGAAGTGACATTTGGCATAACTATTTTG AGTGGAGGAATTTGTGGGAGTAATGTAATTGGGGCCACATATCTGTCATCTTTATGTAACAAAGTGGAAAACATTGCCTT TACAAACATAGCCTTTTGGCTAAATGTTGAATGGGAATATATGCATATTCCAAGGAAAGAGAAGTAAGAACTAATTAAAG GAGACTAATGATTAAATTCTCAGCAATGATGTTTTTGCATTATGTATGTTTTATAGTACTTGTAATCTCCATGGGATAAT TTTGTTCGAGTAAGAGTCGACTATTAGCTATAAGCAGAAAAACTATTTAC
CDS sequence (LotjaGi1g1v0363400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAACAACAAGTCCATGAATGACAACAGTGATGATAGAAACGACAGTCATAATAACTGGTTGGGATTCTCTCTTTC ACCTCACATGAAAATGGATGCTATAACTTCTGCCCCTCTCTACCACCATCATCATCAACAGCCACAAGCTTCTGGAGGTT CCAACACTGTTCCTACAACCTTCTATGGTTCTTCTGGATTCTGTTATGGTGTTGGAGAAAATGGTAACTCCCATTCTCCT TTGACTGTAATGCCTCTCAAATCAGATGGCTCACTCTGCATCATGGAAGCTCTCAGCAGATCACAAACACCAGGGATGGT GCCTACTTCATCTCCAAAACTTGAGGACTTTCTAGGTGCAAGTATGGGATGTCATGAATATGGAGGCCAAGAAAGTGAAC TAGCAATGTCTCTGAGCTTAGACAGCATCTATTACAGTACTCAGAATGCAGGAGATCCTCATCAAGCTAACAGAGACCAT TCACTTGAACTTCTTTCACATCCTTATTACTCAGGACTTGATTGCCATGGGATGTATCAATCATCACCATTGGAGGAAGA AAACAAGGAAACAGGAAATGTCACAGCTTGCAGCTCTCAAATAGTTGAGTATTCTGCTCAGCATGCTGTGGAGCAGAAAA TGAACTGTAACATTGTGAATGATCGTGGAAATGCTGCTTCTGGTGGTGGTTCTGTTGGGTGTGGTGGTGAGTTACAGTCA CTGAGTTTATCTATGAGTCCTGGCTCTCAATCTAGCTGTGTCACTGTTCCGAGTCAGATCTCACCTTCTGGGAGTGACTC AGTGGCTGGAAATGGGAAAAAGAGAGGCGCTGCTAAGATGGGTCAGAAGCAACCAATGCATAGGAAATCTATTGATACAT TTGGACAGAGAACATCTCAGTACAGGGGTGTCACAAGGCATAGATGGACTGGTAGATATGAAGCACATTTGTGGGATAAC AGTTGCAAGAAGGAAGGACAAACCAGGAAAGGAAGACAAGTATATTTGGGGGGTTATGATATGGAGGAGAAAGCTGCAAG GGCCTATGATCTTGCGGCTCTCAAGTACTGGGGAGCTGCTACACATATAAACTTCCCTGTAGAAAATTACCAAGTCCAAC TTGAGGAAATGAAGAACATGACCAGGCAGGAATATGTTGCTCACTTGAGAAGAAAAAGCAGTGGTTTCTCAAGGGGTGCT TCAATGTACAGAGGAGTGACAAGGCACCACCAACATGGCAGGTGGCAAGCTAGGATAGGCAGAGTTGCTGGAAACAAGGA CCTTTACCTTGGCACATTCAGCACTCAAGAGGAAGCAGCTGAAGCATATGATGTAGCAGCAATCAAATTCCGTGGAGCAA ATGCTGTCACCAACTTTGACATATCAAGATACGATGTCGAAAGGATCATGGCCAGTAATGTTCTGCTTGCCGGGGACATG GCTAGAAGAAACAAAGATAATGATCCAAGAATTGAGGCCATTCAATGCAACAATGGAGAATCAGTCCAAGCTGCAGCTAG AAACAACAATGAAAATGTTTCAGATTGGAAAATGGTTTTGCATCACCCTCCACAGCAAGAACAGAACACTAACTGTGACC AAAAAGTTATGAATTGTGATACCTACAGAAACGCTGCTTTCTCTATTGCGCTACAAGACCTTGTTGGGGTTGATTCATTA GGTTCTAGCTATGACTCTAGCAAGATTGGGACTCATTTTTCAAACCCTTCTTCTCTGGTAACAAGTTTAAGCAGTTCAAG AGAAGCTAGCCCTGAAAAAACTGGTCCTTCATTACTCTTTCCAAAGCCTCCAATGGAAACAAAAATTGTCAACAACCTCA ATTCCTCTGGTGTTAGTTCTTGGTTTCCCTCTCCAATGAGGCCAGCTTCTGCTATCAACTTGTCTCATTTGCCAGTTTTT GCTGCTTGGAATGATGCCTAG
Protein sequence (LotjaGi1g1v0363400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMNNKSMNDNSDDRNDSHNNWLGFSLSPHMKMDAITSAPLYHHHHQQPQASGGSNTVPTTFYGSSGFCYGVGENGNSHSP LTVMPLKSDGSLCIMEALSRSQTPGMVPTSSPKLEDFLGASMGCHEYGGQESELAMSLSLDSIYYSTQNAGDPHQANRDH SLELLSHPYYSGLDCHGMYQSSPLEEENKETGNVTACSSQIVEYSAQHAVEQKMNCNIVNDRGNAASGGGSVGCGGELQS LSLSMSPGSQSSCVTVPSQISPSGSDSVAGNGKKRGAAKMGQKQPMHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDN SCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGAATHINFPVENYQVQLEEMKNMTRQEYVAHLRRKSSGFSRGA SMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASNVLLAGDM ARRNKDNDPRIEAIQCNNGESVQAAARNNNENVSDWKMVLHHPPQQEQNTNCDQKVMNCDTYRNAAFSIALQDLVGVDSL GSSYDSSKIGTHFSNPSSLVTSLSSSREASPEKTGPSLLFPKPPMETKIVNNLNSSGVSSWFPSPMRPASAINLSHLPVF AAWNDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 646 | 627 | 4.3E-229 | – | |
| PANTHER | 20 | 646 | 627 | 4.3E-229 | – | |
| MobiDBLite | 252 | 288 | 37 | - | – | |
| MobiDBLite | 252 | 268 | 17 | - | – | |
| Gene3D | 299 | 368 | 70 | 3.6E-20 | ||
| Pfam | 299 | 358 | 60 | 4.8E-12 | ||
| SUPERFAMILY | 299 | 368 | 70 | 2.48E-16 | ||
| CDD | 299 | 367 | 69 | 6.22727E-22 | ||
| ProSiteProfiles | 300 | 366 | 67 | 19.019 | ||
| SMART | 300 | 372 | 73 | 5.8E-27 | ||
| PRINTS | 301 | 312 | 12 | 1.5E-6 | ||
| CDD | 401 | 462 | 62 | 2.52042E-26 | ||
| SUPERFAMILY | 401 | 462 | 62 | 6.15E-18 | ||
| Gene3D | 402 | 462 | 61 | 3.4E-20 | ||
| SMART | 402 | 466 | 65 | 1.4E-33 | ||
| ProSiteProfiles | 402 | 460 | 59 | 19.296 | ||
| Pfam | 403 | 452 | 50 | 1.2E-9 | ||
| PRINTS | 442 | 462 | 21 | 1.5E-6 | ||
| MobiDBLite | 580 | 602 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0363400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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