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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0365400 |
| Transcript ID | LotjaGi1g1v0365400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein EARLY FLOWERING 3; TAIR: AT2G25930.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|O82804|ELF3_ARATH Protein EARLY FLOWERING 3; TrEMBL-Plants: tr|A0A151TTH3|A0A151TTH3_CAJCA Protein EARLY FLOWERING 3; Found in the gene: LotjaGi1g1v0365400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84294280..84300132) extracted from Lotus japonicus Gifu genome v1.2.
GGGCCCACAGGAATAGTGCTGAATAGTGTGTTAAGAAACCAGATAAGAATTTTAGGGTTGGAGTTGCTCTAAGAAACCAC TCTTTCTCTTTCCCTTCTTCTTCTCTTCTCTCTCTGAAATCCCTAATTTCAACACAACAGTGCTCTCTCTCTCTCCTCTC TCTCTCTTCATCATCATCAAATCTCTTCTCGTTTCTTCGCTTTTTTCACCTGGAATTTGTTTCATTCCTATCTCCCCTTC CAACATCATCTTCTTCTCTCCGAATTTCTCGTTTTTTTCTGCTAATTTTTGTTTTTCTTACACCGATTACTTCTTCCCTT GTTGTCGGTAATCCACTACTCACCATCAAAACTCACCCCTCTTCAGATTTCGGAGCTGCGGTAATCACAGTTTACTTCAA TTTTTTGATTTTGTTCTAGCTGTTACTCTTTTCCCCCCTTTCTCTGCGTTTGGATTTTGATAATTGTGTTTTGAGTTTTT GCAACATCTGAGCAAGATCGAGTGTGTTTTTACTATTTACGAGTCTGGCTGGTAAAAAGTTGAGATTTTGAATCGTTTTG AGCAAGTGGGTCGATTCATTAACTATTAGTTCTTGTGTATGCAGTCTGCTGCAACCCAATTGCTTGATTGGTTTTGGGTT TGTGGATTAGAGGATCATGCTTTGGCTGCTTGTTTGCAATTTGACATAAGAAAAAAAAAGGAGGATTTGGTTAATTTGTT GTGGTATTATTAGGAAGAAGAAGGATGAAGAGAGGGAAAGATGATGAGAAGGTTATGGGGCCATTGTTCCCTAGACTCCA TGTTAGTGATACAGAGAAGGGAGGGCCAAGAGCACCACCAAGGAACAAGATGGCCCTCTATGAGCAGTTTAGTATTCCCT CTCAAAGGTTCAACCAAGGCCTTCTGCCTCCCACCAACACAAACACTTCTAGTAATACAGCTCCCCCAGCATCCTCAAGC CAGGTAATTATTGGGTTCTCTAGTTTTGCATACAGTATTAGTTATTATGATTATTATTTGTTTAGTTTTGATTTGGCTAT TAGGGATTCTTATTTCTTAACATTTTGTGGTGTTCTAATTCCTAGTTTGTGTTACTCTTGTTTTACTGTTGTGTTTTGTA TGTGCTTGATTGTATTTGTGTGTGTGCGTTGAGAGGCGATTGTTTTCGTTTCTGAATGTGTGGATTAACATACTTGTAGG GGGCTGTACATGAGAGAAATTATGTCTTCCCTGTTCAATCGCCTTCACAGACCCCTATTCGTCGCGCTGAAAAACCTGTT TCTCACCAATCCGAAGGGGCAAATCTGAATTCTTCATTGGTTCAACTTGAGCAGAGGAAGAAGGTGGACGAAGATGACTT TACAGTTCCGATATACATTCGTTCAAGGACTGGTCAATCTAGTGATCGAAGTCTTGATGGGAAAAGGCTCAGGTATTTTG GTTGTTCAGTAGCAGAGCAAAATGATTGTGAAAGGGATCTGAAACAGTATGCTCCCTCACTTGTCAATAAGAGAAGAGAT GTAAGAAGCGAAACTGATGGTCTTCCACCAGTAAGTCCAAATAAGGAGCAGCCGTTAATACGTGCCAGAAACACATCAAC TGGAGAAAATATTGACACCTTCAAAAGGCAAGCCAAGGTGACTCCAAATCAAGAGTTTCAAGATTGTACTCTGTCAAAAC CTACCAGATTACAACGAGATGATGCTTGCTTACGGCGGGACTGTGAAGCTGTGTCGCAATCCAATGGCATTGGACAAAGT GGTGGTCTTGTCGAGTCTACTCCAGAGACAGACAAGAGAAATGCGCCTACAGAAAGCCAAACCAGTCCAGGTGAGGCTAT CAATGACACTGAATATCAGAATACTAGGCCTGGCTGTCCAATACGGAGAGGAAGTTTGAACAAAAGTGGCAATGTTTCCA AGATCTCGAGGGTAGAAAATTTGTCAACCCTAAAAGTTTCTCCTGATGATGTTGTTGGACTAATCGGTCAAAAACATTTC TGGAAAGCCCGAAGAGCAATTGTCAAGTAAGTCATGTTGCTTGTCAAGTGTCAACATCATCAAGTTTTGAATGGTCTTAA ATGCAAAGTGGCCAAACCTTTACCCATATTTAAGTAGTGGACTCCTTTAATTGCTTAGATCTGAAAGTATCTTGATTGTT GGTTTTGTGAATTTTATAATTTTGGCATAAAACCCTTAATTTCTTTTATGTGGACATGCACAAAGTTGTAGAATATAAAA CCCAAAACTACTAATTTTTTATGGATGTTTGATATGTCCACTGATTTGATTATCCATACTTTATGGAATGTGACATTTCC TCTTTCCTTCCTTCTTTTTTTGCATGCACCTTCTATTAGCTTTGGGTCTCTGGTTAGAGAATATGTGAGAAATGTTCACT TGAGAAGAAATTTAGGACTGCTTCTATCTGATGGCATTCCTTTTTTCTTTTCTTTTCGCCTTTGGCTAACACAGCATCTT TTATGCATCCTTAATCATGTACTAGGCATGTGGGTTGGATATTTACATTTCAATGAAGGAGTTGTTTGTGGCTTTGAAGA AAGGAAATTTGATAGTCAGGGTCCCTTCTAATTTGGTGTTTTTTTTAACATTGAAAGTGCTTAACACTGTTTTAATGGTG GGTACTGGTTACAACAGGGCAGTGAGCTTAATAATATACTGTGTCTGGTGGGGACCCTTGTGACAAAAGATCATCTCCTG GTTCACTGTCTTCCTAGCAACTGGATTTTGGATATATATTCCTGTCTTGGTTTCCTCTTGCTTGGTTCTCCATGTCACCA CTTGGGCAAGTTTCCTTACACTGCACTGAAGAACTTGAGCTAAGAAGGGGACCAAGTATTGCAGGATGACCCTTGATGTA TGGTAGGGACACTTGGAGAAGTACATGATGAGTCCTCAATAGATGTTATCATTAGTGGATTTCCTCACAACTCCTCTAGT GTCTTGGTTTTCTGTATTTTGAGATATTTTGGGATTGGGATTTTCTTTTATAATACACACAGTAGCTAGCTAGTCAAGGT TTGCTTCCATCTATAGCTCCAACAGATTTCATATCACATTGATGTTTTTGTATGATATTGATGTATATGTGCTTGTCCCT AGAAATTAACTTTACTGCAAATTTTCAAGTGCACTTCTATTGTCAATGTTGAATGCTAATGCTTTGATTGTATGCCCAAT ACTTTATAGTGTCTGGTCTTTATTCTGAACAGGTACGAAGAGATTATGCTAATATTTCTTTTGAACAGGCTATATTTTAA TGGCCTTGTATGCGAAGTTTTACTGCTCTAAACCATTTTAGTAAATTTGAATATGTCCAAATTAGGTGTGTTGTCTTTAT TCAGCAAGTGTGGTTATCAGATTCCATGTTAAGATTTTATGAAAATATGATTTATGTGAGTTGTGGACTGGAAGATATTC CGCTTAAACAGTTTATCTGCTGTGATTGGAGAACCTTTAATTTTGGTAGTTAGTGTTTTATATATCGCTGCTAATAACAT GATCATATCTAGTTCGAAATGCTTCATTTTTCATGTTATTTCGATGTATATATGTCTGAAGTTCTCATTTGATGGGTATT TTGCAATTTTCCTTATCCAACTCATGTTCCTCTCTACAGTCAACAGAGAGTGTTTGCAGTCCAAGTGTTTGAATTGCATA GACTGATAAAGGTAAATTGTCTTTAACACTATTCAGCAGTTTATGCTAGTCCAAAAAGGGAAGCATGTTAGCTTTTCTTG CACACACACATTTGGAGTTTTTTTATACAGATCAATTCTTTTTACGTAAGCAGGTCCAACAGCTGATTGCTGGATCACCA GATCTTATGCTTGTAGATGGTGCTTTTCTCAGAAAGTCTCCTCCAAAGGGATCTACTCCCAAGAAACTCTCATTGGAATA TGTGGTTAAACCTCTGCAAGAAAACCTTAAGCGCAATGATTCTGAAAAGCAAAATCATAAAATGGAATGTTCTGCAGAAA ATGCAGTTGGTAAAACATCTATTTCATCGGTGAAAAATGGTAGCCACCTTTCACACCACACCCCTTTTCCCGGGAATCCA CCCCAGCCTAATGTGCCTGCCGACAGTGGGATGAGTCCTTGGGGTTTCCATCAGTCACCTGGGCACCAATGGTTAATTCC TGTGATGTCTCCTTCCGAAGGGCTCATCTACAAGCCATATCCTGGGCCTGGATATACAGGAACAAATGGTGGAGGATGTG GGCCTTTTGGGCCTGCTCCTTTGGGTGGTACTTTCATGAATGCTGCCTATGGAATCCCAAATTCTTACCAAGGGATCGGG GTTCCACCAGACGCTCCTCCGGGCAGCCATGCTTATTTCCCTCCCTATGGCATGCCGACTATGAATGCAGCAATGTCAGA GTCAGCTGTTGATCAGGTGAACCAGTTTTCTGCCCTAGAATCTCGGGGGCAAAGTGGCCATATTTCTGGCAGGGAAGCTG ATCATAACACACACAATCAGAGTTCATGTGATGTACCAGTGCAGGGAAATGGAGCAACATCACATGTCATGTATCAGCAG ACGTACAAGGAGTTTGAGTTACAGGGGAGTAGGACAAGTAGCCCTAGTGAAATGGGGCAAGTTGCTGAAGGAAGAGATGC GCTTCCTCTTTTCCCTACAGTTCCAGTAGAACCAGAGGGAGCCCCTCAGTCTCTTGAAACTGGACAACAAATTCGAGTTA TCAAAGTGGTGCCTCACAACCGAAGATCTGCAACTGCATCAGCAGCTAGAATATTTCAATCGATCCAAGAAGAGAGAAAA CAGTATGACTAAGTCTAGTGTTATTGAGTTGGATCCATTCAAGTAGCTAAAGTGTATGGTCCTGTACTTTCTGGGGGCAT GTAATCATGTAACAGACTATTGTATGTTGTATTTCTGTTTTGGTTTTGACCATTTTACAGCACATTGGTATGAAGATTTA TCTGGCATATCTAATGTAATATTATTATATGTTGTCCCCCATAATTTACACAAGGATTTTTTTGTGTAAGGTTACACAAA CCTAAAATGACCCCTTATCGTAGGTTCATCCGGTTAATTCTTTTTTTTTTTTTAAAAGTTCTTCCTCAACCAGATCTTCT TCTCTCCTCCATGCCCCATGTTCAATGGTTCTTCACACAGATCTCATTCTCCACACAATCTGGTTCTTCAGTTCTTTTTT GTTTCCCTCACTTACGCTCATCTCCACCTCACACGCTTGCAACCACAACGAAAGCCCTTTACCCAACCACACCCTTGCCT CTTTCTCCATCAATACCACCGTCGAGCTTCCCGGAAAACAGAATTCTCCACGGAGATCTGAAAACGACGTTCTGGGTTCA CAGAGCTGGGTTTGGGTTCCAATTCAACTTGTAGGGAGTGAGGAGAAAGTGAACAATGAAGGTGACAGAGAGAAACAATG TTTTGTTCTATTTGGGAAAAGAGGTAGCAGATTTGGGAAAATTGGGATTTCAATTTCTGGGTTTTCACTGAACAAGGGTT TTTTTCATTGAGAAGGGCTTCTGAAACTGCTTTGTGTTTGTTTCTCGCCGGCTAGTGTAAATGCCTTCTCACAGACCTTC AAATCAAGAAGAAGCTATTTTGTTTTGGGTTTTCTTGAATATAATATTATGAAAGATGTGGAAATGTTGTAATTTTGAAG GAGTCACACGTCAGGAAACAGAGGAACGAAGGAATGGATGATGAAATTAGAATTTTTTTTTGAAACTCATGATGAAATTA GAACGGTGGTGGTAGTGTTGTTGGGAAGAATGGAAAGAGAAGGAAGGGGTGGAGATTTGTGGGGGAGGGAGGAGAAGATC TGATGGTGGCGGC
CDS sequence (LotjaGi1g1v0365400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTGTAGATGGTGCTTTTCTCAGAAAGTCTCCTCCAAAGGGATCTACTCCCAAGAAACTCTCATTGGAATATGTGGT TAAACCTCTGCAAGAAAACCTTAAGCGCAATGATTCTGAAAAGCAAAATCATAAAATGGAATGTTCTGCAGAAAATGCAG TTGGTAAAACATCTATTTCATCGGTGAAAAATGGTAGCCACCTTTCACACCACACCCCTTTTCCCGGGAATCCACCCCAG CCTAATGTGCCTGCCGACAGTGGGATGAGTCCTTGGGGTTTCCATCAGTCACCTGGGCACCAATGGTTAATTCCTGTGAT GTCTCCTTCCGAAGGGCTCATCTACAAGCCATATCCTGGGCCTGGATATACAGGAACAAATGGTGGAGGATGTGGGCCTT TTGGGCCTGCTCCTTTGGGTGGTACTTTCATGAATGCTGCCTATGGAATCCCAAATTCTTACCAAGGGATCGGGGTTCCA CCAGACGCTCCTCCGGGCAGCCATGCTTATTTCCCTCCCTATGGCATGCCGACTATGAATGCAGCAATGTCAGAGTCAGC TGTTGATCAGGTGAACCAGTTTTCTGCCCTAGAATCTCGGGGGCAAAGTGGCCATATTTCTGGCAGGGAAGCTGATCATA ACACACACAATCAGAGTTCATGTGATGTACCAGTGCAGGGAAATGGAGCAACATCACATGTCATGTATCAGCAGACGTAC AAGGAGTTTGAGTTACAGGGGAGTAGGACAAGTAGCCCTAGTGAAATGGGGCAAGTTGCTGAAGGAAGAGATGCGCTTCC TCTTTTCCCTACAGTTCCAGTAGAACCAGAGGGAGCCCCTCAGTCTCTTGAAACTGGACAACAAATTCGAGTTATCAAAG TGGTGCCTCACAACCGAAGATCTGCAACTGCATCAGCAGCTAGAATATTTCAATCGATCCAAGAAGAGAGAAAACAGTAT GACTAA
Protein sequence (LotjaGi1g1v0365400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLVDGAFLRKSPPKGSTPKKLSLEYVVKPLQENLKRNDSEKQNHKMECSAENAVGKTSISSVKNGSHLSHHTPFPGNPPQ PNVPADSGMSPWGFHQSPGHQWLIPVMSPSEGLIYKPYPGPGYTGTNGGGCGPFGPAPLGGTFMNAAYGIPNSYQGIGVP PDAPPGSHAYFPPYGMPTMNAAMSESAVDQVNQFSALESRGQSGHISGREADHNTHNQSSCDVPVQGNGATSHVMYQQTY KEFELQGSRTSSPSEMGQVAEGRDALPLFPTVPVEPEGAPQSLETGQQIRVIKVVPHNRRSATASAARIFQSIQEERKQY D
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 321 | 321 | 3.6E-122 | – | |
| PANTHER | 1 | 321 | 321 | 3.6E-122 | ||
| MobiDBLite | 61 | 86 | 26 | - | – | |
| MobiDBLite | 200 | 219 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of photoperiodism, flowering | Any process that modulates the frequency, rate or extent of photoperiodism, flowering. |
Expression pattern of LotjaGi1g1v0365400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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