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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039319
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.260s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0365400.1
n.a. Protein EARLY FLOWERING 3; TAIR: AT2G25930.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|O82804|ELF3_ARATH Protein EARLY FLOWERING 3; TrEMBL-Plants: tr|A0A0B2RBI0|A0A0B2RBI0_GLYSO Protein EARLY FLOWERING 3; Found in the gene: LotjaGi1g1v0365400 LjG1.1_chr1 84294199 84300126 +
2 domain predictions
1 GO term
LotjaGi1g1v0365400.2
n.a. Protein EARLY FLOWERING 3; TAIR: AT2G25930.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|O82804|ELF3_ARATH Protein EARLY FLOWERING 3; TrEMBL-Plants: tr|A0A151TTH3|A0A151TTH3_CAJCA Protein EARLY FLOWERING 3; Found in the gene: LotjaGi1g1v0365400 LjG1.1_chr1 84294280 84300132 +
2 domain predictions
1 GO term
LotjaGi3g1v0429200.1
n.a. Protein EARLY FLOWERING 3; TAIR: AT3G21320.1 EARLY FLOWERING protein; Swiss-Prot: sp|Q9SNQ6|HD3B_ORYSJ Protein HEADING DATE 3B; TrEMBL-Plants: tr|A0A0B2PPM7|A0A0B2PPM7_GLYSO Protein FAR1-RELATED SEQUENCE 11; Found in the gene: LotjaGi3g1v0429200 LjG1.1_chr3 84038498 84042668 -
2 domain predictions
1 GO term
LotjaGi3g1v0429200.2
n.a. Protein EARLY FLOWERING 3; TAIR: AT3G21320.1 EARLY FLOWERING protein; Swiss-Prot: sp|Q9SNQ6|HD3B_ORYSJ Protein HEADING DATE 3B; TrEMBL-Plants: tr|A0A0B2PPM7|A0A0B2PPM7_GLYSO Protein FAR1-RELATED SEQUENCE 11; Found in the gene: LotjaGi3g1v0429200 LjG1.1_chr3 84038498 84042668 -
2 domain predictions
1 GO term