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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0369000 |
| Transcript ID | LotjaGi1g1v0369000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase, putative; TAIR: AT4G33110.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q5C9L6|CNMT_THLFG (S)-coclaurine N-methyltransferase; TrEMBL-Plants: tr|A0A067KCV9|A0A067KCV9_JATCU Uncharacterized protein; Found in the gene: LotjaGi1g1v0369000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84751676..84754963) extracted from Lotus japonicus Gifu genome v1.2.
TGTGATTCAATGGAAGGGATAATGCAGCGACCGTACGACGCGACGGTGAAGCTGATGCTAGCTTCAATGGAGCGCAACTT GCTCCCCGACGCCGTCATCAGGAGACTCACGCGCTTGCTGTTGGCTGCTCGCCTACGCGCCGGTTACAAACCTTCCTCTG AGATTCAGCTCTCTGACCTTGTTTACTTTGTGCATTGTATGTACTGTTCCTTCTTCTCCACTTTTTTCACTTCTTCCCCA TTTTGTGCTCTTATTTATAACTGCTTTCTAAAATGTATAGATATATCATGAATTTGTGGTGATGGGCTATTGTGGAAAGT CCCATAATGACTTTTGGGGTTACTGTGAATTAGATTGTTAGAATGCTTGAATCAGCTTATTTTTCATATGAATCAATTTT ACTATCTAGAACTAGAAACTACTCACATACTAGATTTGATTTTGACTTGATGTTGACTTTTAGAATCAATTGTAGAAGAA TTTCCAAACATGCATTTTTTTCCCAGCACAAATCCAAACACACTATAAGAATAAGTGAATAAGAATTATACTATGTTTAA CCACAATCAATTATATGGAGGGGCTATCATGATTTTCAAGACCCCTGAAAAAATCTGAACTTGAAGACTAAATTCCCCCT GTTTTGCATCAGTGTTTTGTTTGGTGAATGGTGATTAACAATTGTGGGGTATAATTCATCTTGTGCAATTTTGTGTTTTG AGAAGTTGGGAGGGTGTATAGTCTCATTCAATGTACTAGTTGTAGGAAGGAGTAAGGGATGGTTGAGAAAAAACGCAACT GTTCCTATTTCAGTATTACATTGCAGTGTGGGGAGGCTAGGAAACCTTAGGAAGTTAGGAATTTGTAGCAAAACTTGTTC TAGGTTGTATGTTTCGTGTTTGGGGATGAATTAATGTCTGATTTTCTTTCAGCTTTGCAAGATATGCCTATTGCCATCAG CACTGATACGGCAAAATCTCAACATTATGAATTGCCAACCTCTTTCTTCAAGCTGGTGCTCGGAAAGAATCTCAAATACA GGTACTTCGAGGCTTTTTTCTTTTCTACCCACACTGAATTTTTTACTGACATTGAAAAATTATTTTACCCTGTTGCTTTT ATGTTGATTATGTAACATCTTTTAGTATTAATTCATTAGATAAACATGTTTAGTCTACTGCTGTGAATTGCTGGAGTTCT ACAACCTTTCAATGAGAACACTGTGGTGATGGATCCATATGTTCATCACTATAGACACTACAATAGCTGGTGTAAAATAA TATGTATGCATAAATTCATTGGTAGCTGTAGGTTATAAAGATAATATGCTAGTAGATAGTGATTCTGTTTCTTTGGAAAA CATAAGTAAAATCAAATTAGTGTTTCCAATATGATCCACCTAAAAGGGTCTACGGGATGAACGGTGGTGGGCATGACCTT GCTTTAACTCACTTGATTAGCTGAAGTAGATTTACAGTACTGGTTAAGGTAGTTGTATGCTGGGGTGAAGGATAATATGA CAAAAGTGTAAAGATTCATTATAAACAAATCCTTTTGGAGTTAAATGAATATACATGGGATGTAACTTGTTAGCAACATA AACTATTGACATGTATGTGTGTGTGTGAAAGGAAAGTGGTAAAATATACCATAACCTTGTTATTAACACAAATTTCTGTG TATGAACTAGTGCAGTTGTTGTTATTTCTCTTCTGCCTCAGAGACGTTGGAAGATGCTGAAGAAGCAATGCTGAAATTGT ACTGCGAGAGATCAAACCTGAAAGATGGGCATACAGTTCTTGACGTAGGATGTGGTTGGGGATCACTGGCTTTATACATT GCCAAGAACTACAGCAATTCCAGAGTTACAGGAATCTGCAATTCCGTAACTCAGAAAGCTTTTATAGAGGAGAAGTGCCA GTATGCTGTTTGATATACCATCAGTTACTTCAAGCATTGCGCATGTCATTAGTTTACAAATATTTAATCAAACAGATGAC TCTTACAAGACACCAAAGACACAATATTCATCTTGCTAATTAAATGTTGTACGATAATCAAAATAACTTTCTTCACTACT CTCTTTCCAGGGATCTTCAGCTGCAAAATTTAGAGATCATTGTTGCAGATATTAGCACCTTCGAAATGGAAGCTTCTTAT GACAGAATAATTTCCATAGAAATGTTTGAGGTTAGTATCTGTGGGTAAACAATCTGTGTTGAAGCCATGTTTTCTTCAAA TTTTGAATCAGTTTTGACCTTGATGCAGCATATGAAGAACTATAAGGATCTTCTCAAGAAGATATCCAAATGGATGAAAG AGGATAGCCTTTTGTTTGTTCATCATTTCTGCCACAAGGCATTTGCCTACCACTTTGAGGTGATCTGATATGTTGCTGTT AATCAATTTAGCCATCTCAGCTTGTTGGTTCTGATATTAGTTGATGTAATGAACTAACTATCCCAAAAGTTTAAGCTGTT TGTTGAGATACAATACATGAATGGTTTTGTATTATATCTGTAGCTGTTAATACCTTAATAAGACTAGCGACATTTCATAC ATACAATTGACTTACTTACTGGCTATTTATTTATGAAGGATGAAAGTGAAGACGACTGGATTACAAGATATTTCTTTACA GGAGGAACCATGCCTGCAGCAAATCTACTTCTTTATTTCCAAGTAAGCTTACTAATGATATACACCTTGTAGCAGCATTG TTATTACCAGACGGTGTGTGTTTTCCATAAGACAACGATGACGAAAAATTCAAAACAAAAAATATTATCCTTTTTTTCTT TAAAACAAGGAAAAATAAACGAAAGACAGCTGCACCTGCAGTATATTTGTCTAATAGCACCTTTGTATATCATATTAATA TATTATCATCCATATTTAGCTCTTCTGTAATTGATTTCTTTGATGATCTCTGAAGGATGATGTCTCTGTCGTCAACCATT GGCTAGTAAATGGGAAACACTACGCACAGACCAGGTTAGAATCAACTAAATTGCTCAATGATTTTTTATGTGTGTTAATA AAGCTAGTTTGAACTTTGAACCTTCATACTGAAGCAAAAATGAATTATCTTGCAGTGAAGAATGGCTCAAGAGAATGGAC AAGAACATGAGTTCTATCAAGCCAATAATGGAATCAACATACGGCAAGGATTCAGCTATCAAGTGGACTGTCTATTGGAG AACATTCTTCATAGCTGTAGCAGAACTTTTTGGATACAATAATGGCGATGAATGGATGGTTGCACACTTTCTTTTCAAAA AGAAATAA
CDS sequence (LotjaGi1g1v0369000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGGATAATGCAGCGACCGTACGACGCGACGGTGAAGCTGATGCTAGCTTCAATGGAGCGCAACTTGCTCCCCGA CGCCGTCATCAGGAGACTCACGCGCTTGCTGTTGGCTGCTCGCCTACGCGCCGGTTACAAACCTTCCTCTGAGATTCAGC TCTCTGACCTTGTTTACTTTGTGCATTCTTTGCAAGATATGCCTATTGCCATCAGCACTGATACGGCAAAATCTCAACAT TATGAATTGCCAACCTCTTTCTTCAAGCTGGTGCTCGGAAAGAATCTCAAATACAGTTGTTGTTATTTCTCTTCTGCCTC AGAGACGTTGGAAGATGCTGAAGAAGCAATGCTGAAATTGTACTGCGAGAGATCAAACCTGAAAGATGGGCATACAGTTC TTGACGTAGGATGTGGTTGGGGATCACTGGCTTTATACATTGCCAAGAACTACAGCAATTCCAGAGTTACAGGAATCTGC AATTCCGTAACTCAGAAAGCTTTTATAGAGGAGAAGTGCCAGGATCTTCAGCTGCAAAATTTAGAGATCATTGTTGCAGA TATTAGCACCTTCGAAATGGAAGCTTCTTATGACAGAATAATTTCCATAGAAATGTTTGAGCATATGAAGAACTATAAGG ATCTTCTCAAGAAGATATCCAAATGGATGAAAGAGGATAGCCTTTTGTTTGTTCATCATTTCTGCCACAAGGCATTTGCC TACCACTTTGAGGATGAAAGTGAAGACGACTGGATTACAAGATATTTCTTTACAGGAGGAACCATGCCTGCAGCAAATCT ACTTCTTTATTTCCAAGATGATGTCTCTGTCGTCAACCATTGGCTAGTAAATGGGAAACACTACGCACAGACCAGTGAAG AATGGCTCAAGAGAATGGACAAGAACATGAGTTCTATCAAGCCAATAATGGAATCAACATACGGCAAGGATTCAGCTATC AAGTGGACTGTCTATTGGAGAACATTCTTCATAGCTGTAGCAGAACTTTTTGGATACAATAATGGCGATGAATGGATGGT TGCACACTTTCTTTTCAAAAAGAAATAA
Protein sequence (LotjaGi1g1v0369000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGIMQRPYDATVKLMLASMERNLLPDAVIRRLTRLLLAARLRAGYKPSSEIQLSDLVYFVHSLQDMPIAISTDTAKSQH YELPTSFFKLVLGKNLKYSCCYFSSASETLEDAEEAMLKLYCERSNLKDGHTVLDVGCGWGSLALYIAKNYSNSRVTGIC NSVTQKAFIEEKCQDLQLQNLEIIVADISTFEMEASYDRIISIEMFEHMKNYKDLLKKISKWMKEDSLLFVHHFCHKAFA YHFEDESEDDWITRYFFTGGTMPAANLLLYFQDDVSVVNHWLVNGKHYAQTSEEWLKRMDKNMSSIKPIMESTYGKDSAI KWTVYWRTFFIAVAELFGYNNGDEWMVAHFLFKKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 355 | 351 | 2.8E-183 | – | |
| PANTHER | 5 | 355 | 351 | 2.8E-183 | – | |
| PIRSF | 10 | 354 | 345 | 4.4E-51 | ||
| Gene3D | 70 | 350 | 281 | 6.3E-77 | – | |
| Pfam | 76 | 312 | 237 | 3.0E-46 | – | |
| SUPERFAMILY | 78 | 347 | 270 | 2.92E-58 | ||
| CDD | 132 | 234 | 103 | 6.2987E-11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Lipid biosynthetic process | The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. |
Expression pattern of LotjaGi1g1v0369000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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